| Id Trinity | TRINITY_DN50411_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_345201 |
| Sequence | GCCAGTTTAAGAAAGCTGTGAAAAAATGATATCTAAATTAATTAATAAGCTGAATAAGGAAATTAGTTAGTGAGATTCAAAAATAATAAAATCTAAGCTT TTATTATTATCATATATTGCAGGTAGATAGAGAGAGAGAGAGGGTGTAAACGCGTATAGCAGTTGAGAAACAGTGATAGATAGATCTGTTTTGGCTTTTG AGAATAAGAAATAATCACAACCGATGGGAGAGGTGGCGCGTGGAGGTGGTTGCGCTCCGATGGATCTCTTCCGTTCCGAGTCGATGCAACTCGTTCAACT CATCATTCCAATCGAATCCGCTCATCTCACCGTTTCTTATCTCGGTGACCTTGGCCTCCTTCAATTCAAAGATCTTAATACAGACAAAAGCCCTTTTCAA CGGACTTATGCTGCTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAATTACGTTTTTTCAAGGAGCAAATGTTGAAGGCAGATGTTTTACCAGTACATT CTACAACAGTGGTTGATGTGAACATTGATGATCTTGAGGTAAAACTTGCGGAAATTGAATCAGAGTTAACTGAGATAAATGCAAATGGCGAAAAGTTGCA GCGCTCTTACAATGAACTTGTGGAGTATAAGCTTGTTCTGCAGAAGGCCGGTGAGTTTTTCCACACTGCTCAAAGCCATGCCATAGAGCAGCAGAGAGAA AATGAATCACGCCAACTGAGTGGTGATTCTATTGAAACACATTTATTGCAAGACCAAGAGTTGGTAGGTGATTCATCGAAGCAAGTTAAATTGGGGTTTC TAGCTGGTCTTGTTCCCAGGGAAAAGTCCATGGCATTTGAGAGAATTTTATTTCGTGCCACCAGAGGCAATGTGTTTTTGAGGCAAGTTGTCGTTGAGGA TCCTGTCATAGACCCTGTTTCAGGAGAAAAGACAGAAAAAAATGTGTTTGTGGTCTTCTATGCTGCCGAAAAAGCGAAATCCAAGATTCTGAAAATATGT GATGCCTTTGGTGCTAATCGCTACCCCTTTGCAGAGGAAGTTGGAAAGCAAACTCAAATGATTAAAGAGGTTTCTGGAAGAATTTCAGAATTGAAGACAA CTATAGATGCTGGACTGCTGCATAGGGATAACTTGCTACAGACTATTGGTGCTCAATTTGAGCAATGGAATCTTTTGGTGAGGAAGGAGAAATCTATTTA CCATACCCTGAACATGCTAAGCCTTGATGTGACGAAAAAATGTCTTGTGGCTGAAGGGTGGAGTCCTGTTTTTGCAACAAAGCAGGTCCAGGATGCATTA CAGCGGGCAGCAATTGACTCTAACTCTCAAGTTAGTGCCATTGTGCAAGTTCTGCATACTAGGGAGTTGCCACCTACATATTTTCGCACAAACAAAGTTA CTTCTTCATTTCAAGGAATTATTGATTCATATGGGGTTGCAAAGTATCAGGAGGCAAATCCTACCGTGTATACTGTAGTTACCTTTCCATTTCTTTTTGC TGTAATGTTTGGTGACTGGGGGCATGGAATATGTTTACTACTGGCAGCTCTATATTTCATAATTAGGGAGAAGAAGCTTTCTAGCAAGAAACTTGATGAC ATCACAGAGATGACTTTTGGGGGACGTTATGTTATTTTTTTGATGGCACTCTTCTCAATCTACACTGGTGTGATCTATAATGAGTTCTTCTCTGTCCCAT TTAATATCTTTGGTCCTTCTGCGTATAAATGTCGCGATCTATCTTGCAAGGATGCTACAACAGTGGGCCTGATAAAAGCGCGCCGTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_177010; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345201
| Blastp | V-type proton ATPase subunit a3 from Arabidopsis with 74.51% of identity |
|---|---|
| Blastx | V-type proton ATPase subunit a3 from Arabidopsis with 74.51% of identity |
| Eggnog | ATPase 116 kDa subunit(COG1269) |
| Kegg | Link to kegg annotations (AT4G39080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448472.1) |
| Pfam | V-type ATPase 116kDa subunit family (PF01496.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |