Ll_transcript_345200

• Id Trinity: TRINITY_DN50411_c0_g1_i9
• Name Transcript: Ll_transcript_345200
• Sequence: GCCAGTTTAAGAAAGCTGTGAAAAAATGATATCTAAATTAATTAATAAGCTGAATAAGGAAATTAGTTAGTGAGATTCAAAAATAATAAAATCTAAGCTT TTATTATTATCATATATTGCAGGTAGATAGAGAGAGAGAGAGGGTGTAAACGCGTATAGCAGTTGAGAAACAGTGATAGATAGATCTGTTTTGGCTTTTG AGAATAAGAAATAATCACAACCGATGGGAGAGGTGGCGCGTGGAGGTGGTTGCGCTCCGATGGATCTCTTCCGTTCCGAGTCGATGCAACTCGTTCAACT CATCATTCCAATCGAATCCGCTCATCTCACCGTTTCTTATCTCGGTGACCTTGGCCTCCTTCAATTCAAAGATCTTAATACAGACAAAAGCCCTTTTCAA CGGACTTATGCTGCTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAATTACGTTTTTTCAAGGAGCAAATGTTGAAGGCAGATGTTTTACCAGTACATT CTACAACAGTGGTTGATGTGAACATTGATGATCTTGAGGTAAAACTTGCTGAAATTGAGTCAGAGTTAACCGAGATGAATGCAAATGGCGAAAAGTTGCA ACGCTCTTACAATGAACTTGTGGAGTATAAGCTTGTTCTGGAGAAGGCTGGTGAATTTTTCCACACTGCTCAAAGCCGTGCCATAGAGCAGCAGAGAGAA AATGAATCACGCCAACTGGTTGATGAATCTTTGGAAACACCTTTATTGCAAGACCAAGAATTGGTAGGTGATTCATCGAAGCAAGTTAAATTGGGCTTTT TAGCTGGTCTTGTTGCCAGGGAAAAGTCTGTGGCATTTGAGAGAATTTTATTTCGTGCCACCAGAGGCAATGTGTTTTTGAGGCAGTCTGCTGTTGAGAA TCCTGTCACAGATCCGGTTACTGGAGAAAAGACTGAGAAAAATGTATTTGTGGTCTTCTATGCTGCCGAAAAAGCGAAATCCAAGATTCTGAAAATATGT GACGCCTTTGGCGCTAATCGTTACCCTTTTGCAGAGGATGTTGGAAAACAAACTGAAATGATAAAAGAGGTATCCCGAAGAATTTTAGAATTGAAGACAA CAATAGATGCTGGACTGCTGCATCGGGCTACCTTGCTACAGACTATTGGTGATCAATTTGAGCAATGGAATCTTTTGGTGAGGAAGGAGAAATCTATTTA CCATACCCTGAACATGCTAAGCCTTGATGTGACGAAAAAATGTCTTGTGGCTGAAGGGTGGAGTCCTGTTTTTGCAACAAAGCAGATCCAAGATGCCTTA CACCGGGCAGCAATTGACGCTAACTCTCAAGTTAGTGCCATTTTGCAAGTTCTGCATACTAGAGAGTTGCCACCTACATATTTCCGTACAAACAAATTTA CTTCCTCATTTCAAGGAATTATTGATTCATATGGGGTTGCGAAGTATCAAGAGGCAAATCCTACTGTGTACACTGTAGTTACCTTTCCATTTCTTTTTGC TGTTATGTTTGGTGATTGGGGACATGGAATATGTATACTACTGGCTGCTCTATATTTCATAATTCGGGAGAAGAAACTTTCTAGCCAGGTAACCTTTTAT TTTACAATGAAAATTCTTCCTTCTATGAAAGTATTAAAAAGAAATGTTATATTTTGATGGGAAAAGTTAGATTGATTTTCTCTACTTTTTGTCTAAAATG TCTTATTAGATGTCTCATGCTATATATGCATGATAGATCTATATGCAGGAACATATTTAGACCATGTTGGTAAATAATCTTGGTATTTTGACAAGGTTAG AATCCTTATGGATTAATGAAAACCTTTGGAAATCTTTTGTGGTAACAGTTCTTTATGGCAACCACAGAACTCTTCCATAGCATATTCAGTAATTTAATAA TTTTCAAAGGTTCATATTGCTGCCTGATAAGTGAGACAATTTTCAAGTGTGTGGAACACTGCTCTTTTCAACACCATGCACCAAGAGTGCTTGAATTCAT TGAAATCAGTGGTTTTTGTTACTGTAAAAAGGCCATATTTTTTGTGTATTAGTTTAGATGGTCACCCTCCCTATTGAATTTTGTAATTGTTGCAAAATGC AACAGACTTACCAACTAAGGCAACTGGCACCTTTGTCCATATTCCATTGTTGCTATTAACCAGATGATGAAAAAAGTCTGTAAAATCTGTTGATTGACAT TTGACAGTTCGTTTGCCATCAATTTCTGCCCAGTAGTGTTTTATTTTTGTTCCTCTTGCATAAATATATTTCAAGGCCTTTTTTGTTTATAAAAACAGTT TTCTAACATTAAATCTTTTGGTGATAAACAGAAGCTTGATGACATCACAGACATGACTTTTGGAGGACGTTATGTTATTTTAATGATGGCAATCTTTTCA ATCTACACTGGTTTCATATATAATGAGTTCTTCTCTGTCTCATTTGAAATCTTTGGTCCTTCTGCCTATGAATGTCGTGATCTGTCTTGCACGGAAGCTA CAACAGTGGGCCTGATAAAAGCGCGTCGTACTTACCCATTTGGTGTGGATCCTGTATGGCATGGTTCACGAAGTGAATTACCATTTCTAAACTCCTTGAA AATGAAAATGTCCATTCTTCTTGGGGTTGCTCAAATGAACCTTGGAATTATAATGAGCTTTTGTAATGCTAAATTCTTTAAGAACAGCGTAAATGTATGG TACGTATACAACAATAACATTATTTTTGGGAAAATGCTACTTATTTCTTTTTTTCCTGCATCGTGGGAAGAAAGCGGGTTGAAATAGATCTCCCACACAC TTTTGAGCAATTATTCATATCTGCAATATGACTGAATTTCTCTTTATAATTTTGATCTGGCTTGCTAATTTATAATTGATGGCATTTCATTGTACACTAT TTCACTTTTCAGGTTCCAGTTTGTTCCCCAGATAATATTTCTCAACGGTCTATTTGGCTACCTATCCCTTCTTATTATTGTGAAGTGGTGCACTGGTTCT CAAGCTGATTTGTATCATATATTGATCTACATGTTCCTGAGCCCGACAGATGATTTGGGTGAAAACCAACTCTTCGTTGGTCAGAAATATCTGCAGATTA CACTTTTGATTCTGGCCTTTATCGCTGTGCCTTGGATGCTGATCCCAAAACCTTTTATTTTGAAGAAGCAACATGAAAATAGGCACGGGGTTGAATCTTA TGCACCACTTCAAACGACAGAGGAAAGCTTGCAAGTAGAGTCAACTCATGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAA CTCATACACACCATAGAGTTCGTACTTGGAGCAGTTTCTAATACAGCTTCTTACCTTCGTCTATGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAACTG TATTCTACGAGAAGGTTCTGCTAATGGCATGGGGGTACCATAACGTGTTTATCCTGATAATCGGTCTCATTGTCTTCATATTCGCTACGGTTGGAGTGTT GCTTGTGATGGAAACTCTGAGCGCCTTCTTGCATGCTTTACGTCTTCACTGGGTGGAGTTCCAGAACAAGTTTTATGAGGGGGATGGTTACAAGTTCAAT CCTTTCTCATTCTCATTGATAGAAGATGAGGATGAGTGATGGGTTTAAAATGACATTAATAAGGTGTGGTTATGTAGCTTTGGACTTTTATTGATTCTTT CATTTGCCTTTTCAATTCAGTTATCTGAGGATTGTATATTGTGTAATCCTGGGAGCCTTTTCATACAACACCATTATGCATCTTTGTTTATTGATGCCTT TGAGAGAATAAATGTATCTCCCTATTAGGGGAGTAACTTTGTGTGATCTTCTAGGCTCCCAGGCATGGCGGTGTAATAATTATAAGATAACTTAATATTT TATATACTTTTGTTTTCTTTTCTAAAAAATGATTGATATTTATTATGATATCATAAGATGCATACTATCATAAGAGAATGGTGAGGCTTTTGTACTCTTA ATTATAGTTCGACCAGC
• Tissue: pods
• Gene name: LI_gene_177010;
• Additional information: details;

Expression of Ll_transcript_345200

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0.1
• PS3: 0.2
• PW1: 0.2
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345200

• Blastp: V-type proton ATPase subunit a3 from Arabidopsis with 73.48% of identity
• Blastx: V-type proton ATPase subunit a3 from Arabidopsis with 73.48% of identity
• Eggnog: ATPase 116 kDa subunit(COG1269)
• Kegg: Link to kegg annotations (AT4G39080)
• CantataDB: Link to cantataDB annotations (CNT0001114)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454213.1)
• Pfam: V-type ATPase 116kDa subunit family (PF01496.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;