Ll_transcript_346378

• Id Trinity: TRINITY_DN50412_c0_g1_i4
• Name Transcript: Ll_transcript_346378
• Sequence: GGCTTTGTAATTGTAAACTGCAAGACAAAACGGTGTCGTATTTTATCCTGAGTCATTCCCTTCACTCACTCACTCCTCTTGTACTCTGAATTTCTTCGAC ACAAATTACATTAGAAAGGGGGTTTAGGGTTTTCGCTCCTTCTCTTCCTCTGCGAGTGCAATTTGAATTCTCGATTCATTCAAAAATCTTCTTCACTCAC ATTCACAATGATGTACGGTGATCCTCATAACCACCACCCTCATCAACAACAACAACAGCAGCCGCCGCCGCCACAGCATTTTCAGCATCAGCAGCAGCCA GGTCCAGAATTTCACCGTGGACCACCGCCGCCGCCGCAGATGATGCGCCAACCTTCTGCTTCCTCCACCAACATACCTCCAGAGTTTCACCACCCTGCTC CTGGTGGGCCCCATCCTCCTCATTACGATGTTCATGGTGACATTCATGGTGCAAAAAGAATGAGAAAGCTTGCTCAAAGGAAGGCGGTTGATTATACGAG CACAGTTGTGCGTTATATGCAGATTCGTATGTCGCAACGAGATTCAAGGGACAGGACAGTACTCCAACCTACCCCAGCAGCAGCAATTGATATGTTACCA GCAGTTGGCTATTCAGACAATCCATCTACAAGCTTTGCTGCTAAATTTGTTCATACATCTATAAATAAAAACCGCTGCCCTATTAACCGTGTTCTTTGGA CTCCAACGGGACGGCGTCTTATTACTGGCTCGCAGACTGGGGAATTCACTCTCTGGAATGGACAGTCTTTTAATTTTGAAATGATTCTTCAGGCACATGA CCAAGCCATCAGATCCATGGTCTGGAGTCACAATGACAACTGGATGGTCTCTGGTGATGATGGAGGCGCAATAAAGTATTGGCAGAACAACATGAACAAT GTTAAAGCCAACAAATCTGCTCATAAGGAATCAGTCCGTGACTTAAGTTTCTGCAGGACAGATTTGAAGTTCTGCTCATGCTCTGATGATACTACTGTTA AAGTTTGGGATTTTGCACGCTGTCAAGAAGAGTCTTCATTAACTGGTAATGTGCTTTGAGGATGAGTTATCGTCTCCTATCTGGTTGGAGAAATGAATCT GGATCACTAATAAGATACTATTAATATATTTACTGGGGCCTTGACACTGATACTGTTCTCTTAATTACTATGTGGTGACTCCATTAGTTAACAGTGTCTG CTTTATTTGAGGCTTCTCATTTACAAACTATACTATTCAGGAACTTGAAATTGGATTCTGTCAATGTTAAAAGTAATCTCATGTTTCTCAATCTCGGAGT GTGGATAATAGAGGAATGGTAATTATAAAATTGTTCAGAGCTTAATTGCCTTTATTGGTTTGTATTGGCAGTTTGCAAAATTATTCTTGTTAATTATATC TCATAACATTTTATTGTGTAAATATTTTGTTTGTTGTGCAACAGGTCTCATCTTTCTATTGACCAAGAACTTGACCATTCCACTTAAAATTTATACTTTT TACTTTTATTTTAAAGCCAATTTACTCAGTTGCTTGTAAAATCAGTTCCTGGATATAGATTGTTAGTCTTAGAATGCATCTTGTGTTTATATTATTCTTT CCCTGTTATTAATTGAACCTAAGAATTCTCAGTGTGGCATTTGAACTCAGGCAGGCCATGGTTGGGATGTGAAGAGTGTTGACTGGCATCCTACAAAATC CCTATTAGTATCAGGTGGGAAGGACAATCTTGTGAAACTTTGGGATGCTAAATCGGGAAAAGAACTTTGCTCATTTCATGGACATAAAAATACTGTGCTC TGTGTCAAGTGGAATCAAAATGGTAACTGGGTGTTAACAGCTTCAAAGGATCAAATAGTAAAGCTTTATGACATAAGGGCTATGAAGGAGCTTGAATCAT TCCGCGGGCATCGGAAGGATGTTACTGCTTTGGCTTGGCATCCATTTCATGAGGAGTACTTTGTCAGTGGGAGTCATGATGGTTCCATCTTCCATTGGCT TGTGGGACATGAAACTCCGCAAATTGAAGTTACTGGTGCTCATGATAATAATGTGTGGGACCTTGCATGGCATCCTATTGGGTACCTGCTCTGCAGTGGT AGTAGTGATCATACAACAAAGTTTTGGTGCAGAAATAGGCCAGGAGACACTGCTCGTGATAGATTTAACAATGGCATGCAAGGATATGCTGAGCAAAATC CCGTTGCTGGTCGTGTGGCTGGTAACTTTGCGATGCCTGAAGTCCCAACAACTCCGGGACCATTTCCCCCTGGGTTGAATCGAAATGAAGGCACCATTCC AGGTGTTGGAGTTGCAATGCCCTTACTTGATGTGCCTCAGGGTGAGCAGATGCAGCCCCATCCTGCTTCAATGGGTGCTCCTCCTCTTCCACCAGGTCCA CATCCCTCTCTTCTTACTGCCAATCAACAGAGACCATACCAGCAGAGTCCTCAGCAGATCCCACAACATCAACACCAGGGACTACCACAACAGATGGGTC CTTTGCCCCCAAATATGCCACAGCTACAGAACCCTTCCCAGTCATCCATGGTCCCTCATCCACATATGCCTCGCCCTCCACACCAAATGCCACTTGGAAT GCCAGGTCCTATGTCACATCAGATGCCAATGCCAGGTCCAATGGGGATGCAGGGTGGAATGAATCAGATGGGTCCTCCAATGCCACAAGGTCAATATGGG GGCATGAATCAAATGCATTCAGGATCCTTGCCTCCGAGTGGAGGGCCGCCTGTTGGTGTTTTTCCAGGCAACTTGCCTAATATGCAAGGACCACCAAATA CCAGTTATCCTCAAGGAGCATTCAACCGACCTCAAGGCGGACAAATCCCTTTGATGCAAGGGTATAATCCTTACCAGTCTGGAAATCAATCTGGGATGCC TCCAAACGCACAACCAGGGGCACCACACTCTCAAATGCCTCAATAGAAAAGGAATTTGTTATTTTTAGTACTTCTTTGATGTTAATTATCTGTAACTTTC TCCTTTGGTTGTGAGTAATTTCAGAATTCAATTAAGGCTTTACAATGAGCAAGTTACACATTCTGCATCATTTAGCAAAGTAACAATAACGTTCTCATGT CACACTCCTCCCAAACTTTGCCATTGTTTTCATGTACTCATTTGAAAGACTTTTTTTGTTGTATATGTTTGATTTACCCCA
• Tissue: pods
• Gene name: LI_gene_177014;
• Additional information: details;

Expression of Ll_transcript_346378

FPKM

• PAB: 0.4
• PNAB: 2.6
• PS1: 2.6
• PS2: 1
• PS3: 1.2
• PW1: 1.2
• PW2: 0.7
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346378

• Blastp: Flowering time control protein FY from Arabidopsis with 54.46% of identity
• Blastx: Flowering time control protein FY from Arabidopsis with 76.49% of identity
• Eggnog: wd repeat(COG2319)
• Kegg: Link to kegg annotations (AT5G13480)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453491.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;