Ll_transcript_346382

• Id Trinity: TRINITY_DN50412_c0_g1_i8
• Name Transcript: Ll_transcript_346382
• Sequence: GGCTTTGTAATTGTAAACTGCAAGACAAAACGGTGTCGTATTTTATCCTGAGTCATTCCCTTCACTCACTCACTCCTCTTGTACTCTGAATTTCTTCGAC ACAAATTACATTAGAAAGGGGGTTTAGGGTTTTCGCTCCTTCTCTTCCTCTGCGAGTGCAATTTGAATTCTCGATTCATTCAAAAATCTTCTTCACTCAC ATTCACAATGATGTACGGTGATCCTCATAACCACCACCCTCATCAACAACAACAACAGCAGCCGCCGCCGCCACAGCATTTTCAGCATCAGCAGCAGCCA GGTCCAGAATTTCACCGTGGACCACCGCCGCCGCCGCAGATGATGCGCCAACCTTCTGCTTCCTCCACCAACATACCTCCAGAGTTTCACCACCCTGCTC CTGGTGGGCCCCATCCTCCTCATTACGATGTTCATGGTGACATTCATGGTGCAAAAAGAATGAGAAAGCTTGCTCAAAGGAAGGCGGTTGATTATACGAG CACAGTTGTGCGTTATATGCAGATTCGTATGTCGCAACGAGATTCAAGGGACAGGACAGTACTCCAACCTACCCCAGCAGCAGCAATTGATATGTTACCA GCAGTTGGCTATTCAGACAATCCATCTACAAGCTTTGCTGCTAAATTTGTTCATACATCTATAAATAAAAACCGCTGCCCTATTAACCGTGTTCTTTGGA CTCCAACGGGACGGCGTCTTATTACTGGCTCGCAGACTGGGGAATTCACTCTCTGGAATGGACAGTCTTTTAATTTTGAAATGATTCTTCAGGCACATGA CCAAGCCATCAGATCCATGGTCTGGAGTCACAATGACAACTGGATGGTCTCTGGTGATGATGGAGGCGCAATAAAGTATTGGCAGAACAACATGAACAAT GTTAAAGCCAACAAATCTGCTCATAAGGAATCAGTCCGTGACTTAAGTTTCTGCAGGACAGATTTGAAGTTCTGCTCATGCTCTGATGATACTACTGTTA AAGTTTGGGATTTTGCACGCTGTCAAGAAGAGTCTTCATTAACTGGTAATGTGCTTTGAGGATGAGTTATCGTCTCCTATCTGGTTGGAGAAATGAATCT GGATCACTAATAAGATACTATTAATATATTTACTGGGGCCTTGACACTGATACTGTTCTCTTAATTACTATGTGGTGACTCCATTAGTTAACAGTGTCTG CTTTATTTGAGGCTTCTCATTTACAAACTATACTATTCAGGAACTTGAAATTGGATTCTGTCAATGTTAAAAGTAATCTCATGTTTCTCAATCTCGGAGT GTGGATAATAGAGGAATGGTAATTATAAAATTGTTCAGAGCTTAATTGCCTTTATTGGTTTGTATTGGCAGTTTGCAAAATTATTCTTGTTAATTATATC TCATAACATTTTATTGTGTAAATATTTTGTTTGTTGTGCAACAGGTCTCATCTTTCTATTGACCAAGAACTTGACCATTCCACTTAAAATTTATACTTTT TACTTTTATTTTAAAGCCAATTTACTCAGTTGCTTGTAAAATCAGTTCCTGGATATAGATTGTTAGTCTTAGAATGCATCTTGTGTTTATATTATTCTTT CCCTGTTATTAATTGAACCTAAGAATTCTCAGTGTGGCATTTGAACTCAGGCAGGCCATGGTTGGGATGTGAAGAGTGTTGACTGGCATCCTACAAAATC CCTATTAGTATCAGGTGGGAAGGACAATCTTGTGAAACTTTGGGATGCTAAATCGGGAAAAGAACTTTGCTCATTTCATGGACATAAAAATACTGTGCTC TGTGTCAAGTGGAATCAAAATGGTAACTGGGTGTTAACAGCTTCAAAGGATCAAATAGTAAAGCTTTATGACATAAGGGCTATGAAGGAGCTTGAATCAT TCCGTGGACATCAGAAGGATGTTACTGCTTTGGCTTGGCATCCATTCCATGAAGAATATTTTGTCAGTGGGAGTTATGACGGTTCCATCTTCCACTGGCT TGTCGGGCATGAAACTCCGCAAATTGAAGTTACTGGTGCTCATGATAATAATGTGTGGGACCTTGCATGGCATCCTATTGGATACCTTCTCTGCAGTGGT AGCAGTGATCATACAACGAAGTTTTGGTGCAGAAATAGGCCAGGAGACACTGCTCGTGATAGATTTAACAATGGAATGCAAGGATATGCTGAGCAAAACC CTGTTCCTGGTCGTGTGGGTGGTAACTTCGCAATGCCTGAAGGTCCAACAACTCCAGGACCATTTCCCCCTGGGTTGACTCGAAATGAAGGTACCATTCC AGGTGTTGGAGTTGCGATGCCCATACTTGATGTGCCTCATGGGGAGCAGATACAGCCCCATCCTGCTTCCATGGGTGCTCCTCCTCTTCCACCAGGTCCA CATCCCTCTCTTCTTACTGCCAATCAACAGAGACCATACCAGCAGAATCCTCAGCAGACCCCACAACATCAACACCAGGGGCTACCACAACAAATGGGTC CTTTGCCTATGCCCCCAAATATGCCACAGCTACAGCATCCTTCCCAGTCATCCATGGTCCCATATCCACATTTGCCTCGCCCTCCACCCCAAATGCCACA TGGAATGCCAGGTCCTACGTCACACCCGGTGCCTTTGCCAGGTCCAATGGGTATGCAAGGTGGAATGAATCAGATGGGTCCTCCACCACCAATGCCACAA GGTCATTATGGGGGCATGAATCAAATGCATTCAGGATCCTTGCCCCCAAGTGGAGGGCCACCTGTTGGAGGTTTTCCCGGCAACTTGCCTAATATGCAAG GGCCACCAAATACCGGCTATCCTCAAGGATCATTCAACCGACCTCAAAGTGGACAAATGCCTTTGATGCAAGGGTATAATCCTTACCAGTCTGGAAATCA ATCTGGGATGCCTCCAAACCCACAATCAGGGGCACCACACTCTTAAATGCCTCAATAGAAAAGAAATTTGCTTTCTTCATTGTAGCTGGTTATTGTTTGC TTTCTTGTAGTTCGGTTCGATTCTCGTGCTGTTAATTAGCGAACTTTCCAAGTTACACTTCATACTTTTCTCCTTTTGGATTTGAGTAGTTTCAGATATC AGTTCAATCTTTACAATGAGCAAGTTACACTTCATACTTTTCTCCTTTTGGAT
• Tissue: pods
• Gene name: LI_gene_177014;
• Additional information: details;

Expression of Ll_transcript_346382

FPKM

• PAB: 2.2
• PNAB: 7.8
• PS1: 8.3
• PS2: 5.2
• PS3: 6.8
• PW1: 5
• PW2: 4.8
• PW3: 4.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346382

• Blastp: Flowering time control protein FY from Arabidopsis with 52.57% of identity
• Blastx: Flowering time control protein FY from Arabidopsis with 76.49% of identity
• Eggnog: wd repeat(COG2319)
• Kegg: Link to kegg annotations (AT5G13480)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413793.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;