Ll_transcript_344222

• Id Trinity: TRINITY_DN50413_c0_g1_i2
• Name Transcript: Ll_transcript_344222
• Sequence: AAAAATTACTCTGTATTGGTCTCCCTACTAAATTGAAATAATTATCATCCTCTAAATCTTGTATATCTCGTGAAATTCACTTACATGTAACTAATTTCAA CAAGTTCATATCACTGGTTTCGTGGTTATCACGTCAGTCTAACACACTGAAGGTCTCCGGTTCATTTTTTTTTATTTTTCCACATTGTTTCTGTCTTTGT GGTATGAACTATTGCAACCACAAGCTGAAATAATAGCAATATAAAAACCGGAGTATCCCAACAGGTATTTAAACCATCCCGAAACAATGAGTAGGCGATG TCGGATTTACTTTCCAACACTTTTCAACCGTTCTTTCTACTTCAAATTTAGTCTAATACCTATTAGTACTGTTATTACTAACATCATATGACTTTGTGTT TACACAAACACAAACGTTCTTGTGTTTCTCATGGTATACTCCCAAGTACTTTTCAAAACCTTTCTTCAAGTACTACCCTTACGAAGATTATTCAAATTTG GATCCAAATTGTTATCATTTCACACACTCAATCATGAACACCAACTGTTTGATCATATTACTCAACCAAATGCTGCTTCAATTACCCGTTTCATGCTTAA CCATTTGCGTAAAAACCACCCCTTTAGAGCTCTTGCCATATTCAAGAATCAGTTCCAGCTATGCTCTCTTGACAATGTCGACGAGGTTACTGTTGCTTTG TCTCTCAAGGCTTGTCAAGGAGAGCTAAGACTCGGGGCTCAAATCCATGGATTTGTCGTGTCTAGTGGGTTTGTTTCCTGCGTTATGGTGTCGAACTCGC TGATGAAAATGTACTGTGTGTCTGGGAATTTTGAAAAGGCTTTGCGTATTTTTGAGAATTTGATCAATCCGGACATAGTTTCTTGGAATACCATCCTTTC GGGGTTTGAGAAGGTTGTGGATGCTTTGAGTTTTGCTTGTTCTATGCATTTGAATGGAGTAGTGTTTGACCCGATAACATTCACTACTGCTCTTTCCTTT TGTTGGGGTGACCATGGGTTTTTCTTTGGGTGGCAGTTGCATTCTCTTGTGCTGAAATATGGATATGGTTGTGAAGTTTTTGAAGGCAATGCACTTATAA CTATGTACTCGAGATGGGGGAGATTAGATGAGGCTAGGAGGGTGTTTGATGAAATGACCAGAAGAGATTTGGTTTCATGGAATGCAATGCTTTCGGGGTA TGCTCAAGGACATGGACATTATGGGTTGGAAGCAGTTTCAATTTTCGTCAACATGGTAAGACAAGGTATGTTGCTTGACCATGTTTCATTAACTGGTGCA GTTTCATCTTGTGGTCATATAAAAAACTTAGAGTTAGGGAGGCAGATACACGGCTTGATTATGAAGGTGGGATATGGAACGCATGCTTCAGTTTGCAATG TTTTGATGTCGACTTACTCAAAGTGTGAGGTCCCCAAAGATGCAAAAGCAGTTTTTCAGCTTATTAGTAATCGGAATGTAGTGTCTTGGACAACAATGAT TTCTATTTATGAAGAAGATGCAATGTCCCTCTTTAATGAGATGAGATCAGATGGTTTGTATCCGAATGAAGTCACATTTATAGGATTAATACATGCTATA ACAATCAGGAATCTGCTGACAGAAGGTCAAACGGTTCATGGGTTGTGCATAAAAAGCTGCTTTTTATCAGAAAAAAGTGTCGCCAATAGCATTATTACAA TGTACGCCAAATTTGAGTTCATGCAAGAATCAAAGAAGATTTTTGAGGAGCTTAATTATAAAGAAACAATAACATGGAATGCATTAATTTCGGGTTATGC TCAAAACGGCTTGTATAAAGAAGCCGTCCTTACATTTCTGTCTGCAGCAAAGGAGATTAAACCCAACCAATACACATTTGGTAGTGTATTAAATGCTATT GCTGCTGCTGAGGATATATCTTTGAAACATGGGCAATGTTGCCATTCTGACTTGCTCAAACGTGGTTTAAGCTCTGACCCAATTGTTTCAGGGGCTCTGC TTGACATGTATGGCAAGCGTGGCGACATAAGCGAGTCGCGAAGAGTTTTTAACGAGACACCTGAAAGACCTGTATTTGCTTGGACAGCAATGATATCAGC CTATGCCCGACACGGAGACTATGACTCAGTCATGAGTTTGTTTAAGGAAATGGAGAGGGAGGGAAACAGTCCCGACTCCATCACTTTCCTTTCTGTCTTA GCAGCATGTTGTAGAAAGGGCATGGTTGATGTAGGCCATAAAGTATTTGACTCCATGGTGAAAGAACATTCAATTGAACCAATCCCCGAGCATTATTCTG TTATGGTTGACATGCTAGGCCGGGCAGGGCGATTGGGAGAGGCAGAGGAGTTGATGCACCAGATACCTGGAGGACCTAGATTGTCAGTATTGCAAAGTTT GCTTGGTTCTTGTAGATTACATGGAAATGTGGAGATGGCCGAGAGGGTTGTCGATACTTTAATACAGATGGATCCTGCAAGTTCAGGTCCATATGTATTG ATGGCAAACTTATATGCTGAGAAAGGGAAGTGGGAGAAAGTTGCCGAGGTGCGGAAAGGGATGAGAGGGAAGGGAGTAAAAAAGGAAGTGGGATTTAGTT GGGTCGATGCTGGTAATGTTGATACTTTGTATCTTCATGGTTTCTCCTCTGGGGATAAATCACACCCAGAGTCTGAGGATATTTGTATGATGGCAGAGTT TGTTGGGTTGCAAATGAAATTTTTGAAAGATAGCATAGAGGGAAGGAGAGTAGTATTAGGAGTAACATATCCATGCATAATTGAGGAATTTGAAAGCTGA TCCATAATGGATAGTTCATTCGAAAGGATTTGAATAATGTTCAATTTTGATGTTAAAACATGGATATCTTGGGACTTAAGAGTTAGGCTTTACTCATGTA CAAAACTTTGTTGGGAGAAAGAAGATATGTTAATGTTAAAAGAAAATGGTCTCGACGAAAACCTCTTGATCGTCTAAAAATTAGTGTTACAGTGGCATGA GTCATTACATAAGTTCTTTATAACTCTTTCAATCCCTCCTACCTTGATGCAAGTGAGTCTAGAGGTGTAAAAATAGGCCAGCCCTGCAGGCAAAAGTTGT TGGTGAATAGCAAACTTTTTTCCATAGCTAAAGGAACATAGTCGAGTGTTGGGACACTGGGAAGTCATGTTGACAACTTCTCAAGGAAGAATCCATATTT TTCTTCATATTTATATTATCGATAAACATAATTTATGATAAAGCATTATGGTGTTATTCGATCCATGTACCCGACCCACATTTGGGATAAAGGCTCGGCT ATTCTTGTTTTGTAGTGTTCTTGCTCTGTAATCTTAGCTTATCGAGATTGACTCTAAGGCCATGTTGAACAGTAAAAAAAGAAGCTTATCCATCG
• Tissue: pods
• Gene name: LI_gene_177018;
• Additional information: details;

Expression of Ll_transcript_344222

FPKM

• PAB: 0
• PNAB: 0.8
• PS1: 0.8
• PS2: 0.4
• PS3: 0.9
• PW1: 0.5
• PW2: 0.4
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344222

• Blastp: Pentatricopeptide repeat-containing protein At4g32430, mitochondrial from Arabidopsis with 56.2% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g32430, mitochondrial from Arabidopsis with 56.2% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G32430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431484.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: tRNA (RF00005)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;