Ll_transcript_344560

• Id Trinity: TRINITY_DN50414_c2_g1_i12
• Name Transcript: Ll_transcript_344560
• Sequence: GTGTGATAGGTGGTTTTATGTAATTTGCTTGTTTTTATATCATATAAAACTTACTTTATCATCAACTCATGGTTTTGTTTTTTTATTTCAATGTAAAAGT GTCATTAAAATACATTTAAGGGGTAAAAAATGTCATATATCATTTTTTTCTTTGTTTTTTCATGCACATTTTCCTCTCCATGATTCTAACCCCATAATTA TGACCTATATAAAGGACAATATATGTGTTGAGGTTATCACATAAGCAAAAATAGTGACATAGATGATAATGGAACCAGAAACATCTTGCTTTGCTTTCAT GTTTATTACTATTTTACTTATGAACTTGTATGTGGGAGTGCTAAGTGCTGATAAGTATAGCAGAGATGAATTCCCAGCTGATTTTGTTTTTGGTGCAGCC ACCTCTGCTTATCAGGTTGAAGGAGTTGCTAAAGAAGATGGAAGAACTCCTAGCATATGGGATACTTTTGCTCATGCTGGTTTCTTCTTTTGCCTTACTT CATCATCCATCTTACTAATAACTATGGATTTTCTAAATTTTAGAAGCTTACCCTCTAGAGAGAAATGAGTCTTTGAACTTATTAAATGTAGTTGATTACA AAGGAAGAAATTAATACCCTACTTGTTTGGTAAAAAGAGAGATAAAAAACTTACTAATAAGGTTGAATGTAAAATGAGTAGTAATAAGGGTATTTTCCTG TTATTGTTCTGAAGTGAGAATCAGTAACAGGAAAAACACAAAATCTAAAAGCTTACTAAACATTTTCATCAACAAAAGTGACACTAATGTTATGATTTTG ATTTTTAATAAGCAGGATATGCTTATGGAGCAAATGGAGATGTAGCTTGTGATGAGTACCACAAATATAAGGAAGATGTGCGGCTCATGGTGGAAACAGG TCTTGACGCCTATAGATTTTCCATTTCTTGGTCCAGACTGATACCAAATGGTAGAGGACCCCTCAATCCCAAAGGATTACAGTACTACAACAATCTCATA AATGAACTCATCATCAATGGAATCCAACCACATGTTACACTACACAACTATGATCTTCCGCAGGCACTTGAAGATGAATATGGAGGATGGATTAGTCGTG ATATCATAGAAGACTTCACAAATTACGCGGATGCATGTTTTAGAGAGTTTGGTGACAGAGTATTGTATTGGACTACTGTGAATGAGCCCAATGTATTTGC CCTAGGTGGCTACGGTCAGGGCACAACCCCTCCACGGCGATGTTCTCCCCCATTTTGTCTTACAAACAGCACCAGGGGAAACTCAACATATGAGCCGTAC CTGGCAGTTCATCATATTTTGTTAGCACATTCTTCAGCTGCGAGATTGTATAGGATAAAGTATAGGGTATATGACCTAATCTTTTACATAGTATTTACTT TGCTTATGAATTTCATTATTCAATTTAATTTTCCTGCATTGCTACAATGCTACTTTCTATTCATTTAAATCGCAAAAGCCTCAACTTTTACACCTAAGGT AAATAGTCCTTCGCTGGTTTTCAATCTTTTCTCGCTCAAACAGAACATTTTTTGGAACAGAATGTTCATGATTCCATTGACTTTTAAGTGACACTCCAGG ACAATCAACATGGCTATGTTGGTATCTCTGTTTACACATTTGGGCGCCTTCCTCAAACAAATACTGAAAAAGACAGGGCAGCAAATGAAAGAGTCCGTGA TTTTATAGTTGGTTGGTAAGTTGCAGACCCTACAATTGGTTAGTTTTATTTCTGTCTACCTTTTTTGTTCTGTGTTGAAAATTTTAAGTGAATGAGAGAT GGGGAATTGAATTCAAGGTTATAAGTGGAAAAGACTTAATCTTTGTTTCATTCGGTTGTGGTCTATATATGGTGTCAGATCTAATTATGTGGTTTACCCT TTGTTCTTTAGTTATGACAGATGAATATATATACCTAAATTTTCATCCATGTTAAATCTTTTGATTTCTAATTTCTTATAGGTATAGGCCAAAAACTTGC ATTATTTGATTGGCCACACTAATTGTTTTTTGTTTCAACTGAACTAACATGTGCTTCCACTTTCAATAAATTACTTAGAATTTGTATTGCACTTGAGAGT TCCTTTTTGGTGTAAAATTTTCAAGACCTTTGTTGTCATTATTATGTGGAGTATGTAGCAGTTTTATGTGCCTTGCTTTATTGCAGGATTATGGAACCCT TGGTACATGGAGACTATCCCATTTCCATGAAGACAAATGTAGGTGCAAGAATGCCAACCTTCACAAGTCGCGAGTCTAAACTCGTAAAGGGTTCACATGA CTTTATAGGCGTGATTCACTACAACAACGTGAATGTCACAGACAATTCCGACATCCTGAATAGAAAATTGAGAGACTTCAATGCAGACATGGCTGCAACA ATAATCTATAATCAGGATCTCTTTTCAGATGAAGAGTACCCTGTCGCACCATGGGGTTTACAAGAAGAACTGGATAGTTTCAAGCTCCTTTATGGCAATC CTCCTATTTTCATTTATGAAAACGGTCAACGGACACCGACGAACTCATCGCTCCAAGATGTTTCAAGGGTGAAATATTTGCACGGGTATATTGGTGGCGT CCTTAATGCCTTAAGGAATGGATCAAATACAAGAGGGTATTTTGTTTGGTCTTTTCTGGATGCATTTGAGTTACTGGATGGATATAGATCAAGTTATGGC CTATACTATGTTGATCACGATGATGCCGAGTTGAAACGATATCCGAAGCTGTCTGCGAAATGGTATAGCCGATTTTTGAGGGGTAGAGGCAGGTCTATAG TTGGTGATATTGAAGTTGACAAGGATTCATCACTTGTTTCTGTTGGCCACTTATTTCAGTAGGTTCTTTAGTTCAGCTTCATGGTGATTAGTAGTATTCC CAGCTATGCTGATGCTTAACTTTCCCTTCATATATAGAATAAGAATCAGTTAGGGGAATGTGCCCCCAAAACATTTCTATGTTATAAGCATAATCACTAC ACTAAGGACAAAACTATGTTTTTGAGTACCTCACTGACCAAATGCAGGAATAGTTTTTCAAATAAGAGGAAAAAAATATATCTACTCATGTTCTTTAACG CATTATTCACCGTTTATATTTAATTGACTTTTCAGAAAAAAA
• Tissue: pods
• Gene name: LI_gene_177032;
• Additional information: details;

Expression of Ll_transcript_344560

FPKM

• PAB: 8.6
• PNAB: 7
• PS1: 7.9
• PS2: 7.2
• PS3: 10.9
• PW1: 6.1
• PW2: 9.4
• PW3: 12

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344560

• Blastp: Hydroxyisourate hydrolase from Soja with 60.09% of identity
• Blastx: Hydroxyisourate hydrolase from Soja with 85.71% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (547954)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452634.1)
• Pfam: Glycosyl hydrolase family 1 (PF00232.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;