| Id Trinity | TRINITY_DN50414_c2_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_344567 |
| Sequence | GTGTGATAGGTGGTTTTATGTAATTTGCTTGTTTTTATATCATATAAAACTTACTTTATCATCAACTCATGGTTTTGTTTTTTTATTTCAATGTAAAAGT GTCATTAAAATACATTTAAGGGGTAAAAAATGTCATATATCATTTTTTTCTTTGTTTTTTCATGCACATTTTCCTCTCCATGATTCTAACCCCATAATTA TGACCTATATAAAGGACAATATATGTGTTGAGGTTATCACATAAGCAAAAATAGTGACATAGATGATAATGGAACCAGAAACATCTTGCTTTGCTTTCAT GTTTATTACTATTTTACTTATGAACTTGTATGTGGGAGTGCTAAGTGCTGATAAGTATAGCAGAGATGAATTCCCAGCTGATTTTGTTTTTGGTGCAGCC ACCTCTGCTTATCAGGTTGAAGGAGTTGCTAAAGAAGATGGAAGAACTCCTAGCATATGGGATACTTTTGCTCATGCTGGTTTCTTCTTTTGCCTTACTT CATCATCCATCTTACTAATAACTATGGATTTTCTAAATTTTAGAAGCTTACCCTCTAGAGAGAAATGAGTCTTTGAACTTATTAAATGTAGTTGATTACA AAGGAAGAAATTAATACCCTACTTGTTTGGTAAAAAGAGAGATAAAAAACTTACTAATAAGGTTGAATGTAAAATGAGTAGTAATAAGGGTATTTTCCTG TTATTGTTCTGAAGTGAGAATCAGTAACAGGAAAAACACAAAATCTAAAAGCTTACTAAACATTTTCATCAACAAAAGTGACACTAATGTTATGATTTTG ATTTTTAATAAGCAGGATATGCTTATGGAGCAAATGGAGATGTAGCTTGTGATGAGTACCACAAATATAAGGAAGATGTGCGGCTCATGGTGGAAACAGG TCTTGACGCCTATAGATTTTCCATTTCTTGGTCCAGACTGATACCAAATGGTAGAGGACCCCTCAATCCCAAAGGATTACAGTACTACAACAATCTCATA AATGAACTCATCATCAATGGTTGTTAAATACCACTTTCTTCATTTTCAAAATAAACAGTGCCTTTATATTCACTCCCAAAAACTATAAAAAGTAAAAAAG GACTTTGGACTTTGGAGTCAATTATGCTTCTTCAACTGATATAGTCTTTCCCTTGTGCAGGAATCCAACCACATGTTACACTACACAACTATGATCTTCC GCAGGCACTCGAAGATGAATATGGAGGATGGCTTGGCCGTGACATCATGTATCATCCTGAACTTTTGCACCACAATGTTGTTGAGTTAAATTATGAAACT TTTATTATATGTATTACTTCCATAAAAAAAGGCACTACACATTTTAGTTGTATCCAAATGACTTTCAAGAAGATTACAAGAAAATCCTCTAGTTTTGTTC ATTCTAGGATTCTCATTTTGCTTTTCCTTATGATCCTAGGCCTAGCAGATTTGTTTGCTGTTTGAAATGTTTACTACTCTTACAAATGATTGTGTGGATT TTCATTTGTGCTTAGCATACAAATCTTTTTAGATAACTATAAACAGAATCGAGAAATATTAATTTAACGGGTAAATTACTTGGCTGTGAATGCAGAGAAG ACTTCACAAACTATGCAGATGCATGTTTTAGAGAGTTTGGTGACAGAGTATTGTATTGGACTACTGTGAATGAGCCCAATGTATTTGCCATAGGTGGTTA TGATCAGGGGATCACCCCACCTCGGCGATGTTCTCCCCCGTTTTGTGTTACAAATAGCACTAGGGGAAACTCAACCTATGAGCCCTACTTGGTAGTTCAT CATATTTTGTTAGCGCATTCTTCAGCTGCGAGATTGTACAGGATAAAGTATAGGGTATGTCATCTAAACTTTTTCTTCATTACTAGCTTGTGTTTAAGTT TCAAACTTAATCCTTATCTGGTTTTCAATCTTCTAGCTCATACTGGAATCTTTGTGGACAAAGAATGTTATTGTTTTCATGGAGTTTTAACTGACACTGC AGGACAATCAACATGGATTTATTGGTATCTCTGTCTACACATTTGGATGCATTCCGCAAACAAATACAGAAAAAGACAGGGTAGCAACTCAAAGAGTCCG CGATTTTTTTCTGGGTTGGTAAGTTACAGACCTTAGATATGTTAAAACTTTTGCTTTTCTGTTCCTTATCGGTCTAAAACTTTCTTCCGTTCCACATGCT AATAATATTTTTTGAATTGAACACTTAGCCGGTACTTCCATTCTCGAAACTACTTACAATTTGATTGGCTCTTGAGAGTTTCCTTTTGTGAGGAAATTTT CAGGTTCTTTACTGTCATATGTTGGTGATGGTTATGATATAATGTGAAGGGCATGGAAATTTTATGTTCCTGCTCTGTTTCAGGATTGTTGAACCCTTGG TGTATGGAGACTATCCCATTTCCATGAGGACAAATGCAGGTGCAAGAATACCAACCTTCACAGATCGCGAATCGGAACTAGTTAAAGGTTCATATGACTT TATAGGCGTGATTCACTACATCAATATCAATGTAACAGACAATGCTGACATCCTGAATAACAAATTAAGAGACTTCAATGTAGACATGGCTGCAAAAATA ATCTGTAAGTACTTCTTCACATACAAGAATAGTAAGTTTAGTAAAAGATTAAAGTTGGTCAAATAAGCTTACTATACTAACTGCAGGCACTACATCTTTT TTATTATCATCTGAAATATCCAACTACTTGATTTGCATTAACATCTATTATCTAGTTAACAACTTTCATCAATACACACAACCATGTATACCATTCATTT TTTAATGATCGGTAGAGCAAGGCGAATAACTCAACGCTGTCATGGTTTTGGCAGATGGGCGAGAGTTTTACTCGGATGAAGAGGTAACTATATAACAACA ACCGAACATTTATCCTACTAACCGTAAAAAAATATACGTTTCTCATAATTATTTGTTTTGTTAACTACTTCATTGTATGACTAACTGGCTTAACTTGATT GATGATTCAGTACCCTGTCACACCATTGGGTTTACAGCAAGAACTGAATAAATTCAAGCTCCTTTATGGCAATCCTCCTTTGTTCATCTATGAAAATGGT CAACGTACAGCAAGGAATTCAACACTGCATGATGTGTCAAGGGTGAAATACCTGCATGGATATATTGGTGGTGTGCTTGATGCAGTGAGAAATGGAGCAA ATGTAAAAGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_177032; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344567
| Blastp | Hydroxyisourate hydrolase from Soja with 62.34% of identity |
|---|---|
| Blastx | Beta-glucosidase 11 from Arabidopsis with 59.46% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (547954) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452637.1) |
| Pfam | Glycosyl hydrolase family 1 (PF00232.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |