| Id Trinity | TRINITY_DN50416_c0_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_345935 |
| Sequence | CTTCAATAAAGCTTAGAACCCTAGCAGAATCATTTGATTCTGATTTTAGGGGCATTTCTTTCAATCTTCTATTCTTCGTGCTTAATTGATACCAGTGTTT AACATTGGTATCAGAGCACCGAATCTGGTGCGTGAGGGAAGTGAGATCCACCCTTCTTCCGCTGTTGTTAGCGTATGGTTGTAACGAGAAAAATGTCAAG GGATAACGAAAATTGGGTGCATGAAAGGGACGAGATGCGACGAGAAAGGGAAGATATCAGGCTTCGATTGGAGCTCAATGAAGCTCGTACAAAAAAAACT GAAGAGATTCTCAAGGCAATTGCGTCCAAATTAGGGATTTCAAAGGAAAATTCGTCGATGGAATGAGGCAGCGAAGGCGACGAAGAAGTGAGTAGTTGCA AACTGTACCAAGGTCAAGATAAATGGAGGAAACTGAACATTCCAGTTTTCCAGGGAGAAGACGCATACGGTTGGGTACAAAAATTAGAAAGGTATTTCTC CATGAAGGCCATCACAGAAGAGGAGAAGATACAAGCTATTATGATGGCTATGGAAGGAAAGGCCCTTAGCTGGTTTCAGTGGTGGGAACGTTGCAACCCT TCACCAACATGGAGCAGCTTTAAAATCGCAGTGGTAAGGCGTTTCCAACCCTCCATGATGCAAAATCCATTCGAATTACTATTATCCCTAAAACAAGATG GTAGTGTGGAAGCATACGTGGAAGAATTTGAAAATTATGCGGGGGCACTATAAGAAGTCAACCCAGACTTTGTTAGAGGGATATTTTTGAATGGACTAAA AGAAGAGGTGAGGGTAGAGGTGAGGTTGTACGAGTTAGAGACCCTACCTGAGGTGATACAGAAGGCAATCCTTATAGAACACAAAAATTTGGTGTTTGGC AAGAAGACAGTGGAGAATTATACTAGATCTGGAGCTTCCTATAAGGGTTCCTCTTATAGCAGGGTTGTGTCAGTTGAGCCATATATTCTTAGCAGCAACA AAAAAGATGCACCATCAGTTGCAAGTGGGGGAGGGAGTACCAGGACTGTTACAAAGGTTGAAAGTTCTAGGAACAGGGGGAGTACAAAAAGCTCACTAGT ACAGAGATGAAGGAGAAGAGGGAAAAGGGTCTGTATTTCAGGTGTGATGAACCCTTCACTAGGGATCACATCTGCAAAAATAGACAACTGGGGATGATCA TTTTGTCAGAAGAAGAGGGATCTGAAGGGGAAGTAGAGTTAGGACAGGAGCAGGAAGACTTTAATGCCTTGCAATTGTCTCTTTACTCTATAAGGGGATT TACTTCCACTAAATCTTGGAAAATCAGAGGGACTTTGGGGCTAGAACCAGTGGTTGTGATGATAGATTGTGGAGCATCACATAACTTCATTTCCAAGGAA GTAGTAGACAGCCTCAAGTTGGAGATACAACCCACTAAGGCTTATATGGTTGAAGTGGGAGATGGCCATAGGGTGAAGTGTCAGGGCAAATGCACACAAC TCCAACTGACTCTGCAGGAAATGAAGATAGCTCAGGATTTCTATCTCTTTGGATTAAAGGGTGTGGATTTGGTATTAGGGCTTGAATGGTTAGCAGGGCT TGGAGAAATCAGTGTTGACTTTGGTAAACTGATCCTACACATCAACCAAGAGGAGTCTAAGTTCACATTGAAGGGGGATCCTACTCTCACTAAGACAGAG TTGTCTATGGGGGCATTGATGCAAGTCCTCTTAGAAGAAGGAGAAGGATTAGTGGTCCAATGTGCTACTCAATCACCACCTAAGGCAGAAGAACAGGTAC CCTCTCTGTTGCAGGTTGTGTTACTTCAGTATGAGGAGGTTTTCCTAGAACCAAAGGGGCTACCACCCTCTAGGTAGCATGATCATGCTATTCACCTAAG GGTAGGAGCTGAGGTCCATAATATCAGGCCCTATAGATGTCCTCATTATCAGAAAACAGAAATTGAGAGGTTGGTTGCTGAGATGTTGGATGCATGGGTG ATAAGGCCTAGCATCAGTCCCTACTCTAGCCCTATTATACTAGTTAAAAAGAAGGATGGGGTTAGAGATTTTGTGTGGACTATAGAGCCCTGAACAAAAT CACCATCCCAAATAAATTTACAATCCCACTGGTTGAAGAATTACTGGATGAAATAGGGGCAGCTAAGGTTTTCTCAAAATTGGACCTAAAATCAGGTTAC CATCAGATTAGGATGAGGAAAGAAGATGTGGAGAAAACAGCTTTCAGGACACATGAGAGACAGTATGAGTTCTTGGTCATGCCCTTTGGGTTGACCAATG CACCCTCCACATTTCAGTCCCTCATGAATGAGATAGTTAAACCCTTTTTGAGAACGTTCACCCTAGTTTTCTTTGATGACATACTGGTGTATAGCCCAGA CTTGCCTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_177049; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345935
| Blastp | - |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 48.67% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416449.1) |
| Pfam | gag-polyprotein putative aspartyl protease (PF13975.5) |
| Rfam | - |
| GO | - |