Ll_transcript_345544

• Id Trinity: TRINITY_DN50417_c0_g1_i15
• Name Transcript: Ll_transcript_345544
• Sequence: AACAAGCTGAGCAAAAGGTTTCCAATTGGATTAGAAGAACAGATAAAGAAGTGGGATGCAGAAAAAATAAGGAAATTTCATGAGCGTTGGTATTTCCCTG CAAATGCAACTTTGTACATTGTAGGGGATATCGATAACATCCCAAAGACTGTTTCCCAGATTGAAGCAGTTTTTGGACAAACTGGTGTTGAGAATGAGAA AAGTACAGTAGCCACTCCAACTAGTGCATTTGGGGCAATGGCTAGTTTTCTCGTTCCTAAGCTCTCTGTTGGCCTGGGTGGAAACTCAAGTGAAAGATCA GCCAATATTGATCAGTCAAAAGTATTCAATAAGGAAAGGCAAGCTGTTCGTCCTCCTGTGAAGCATAATTGGTCCCTTCCCGAAAGCAGTACTGATTTGA AGCCACCACAAATATTTCAACACGAGTTGCTTCAAAATTTTTCAATTAATATGTTCTGCAAGATTCCAGTGAATAAGGTTCGGACATATGGTGATCTCCG TAATGTGTTGATGAAAAGAATATTTTTGTCTGCTCTTCATTTTCGTATCAATACAAGATATAAGAGTTCAAATCCACCGTTCACTTCAGTTGAATTGGAT CATAGTGACTCTGGAAGGGAAGGGTGTACTGTGACCACTCTTACTATAACTGCAGAACCAAAGAATTGGCAAAGTGCAATTAGAGTTGCTGTTCAAGAGG TTCGCAGGCTTAAAGAGTTTGGCGTTACCCAGGGTGAATTAACTCGTTATTTAGATGCTCTTCTGAAAGATAGTGAACACTTAGCAGCTATGATTGATAA TGTATCTTCTGTTGATAATCTGGATTTTATCATGGAAAGCGATGCTCTCGGTCATAAGGTTATGGACCAGAGACAAGGGCATGAAAGTTTGTTTGCAGTT GCTGGGACAGTGACACTCGAGGAGGTCAATTCTGTTGGTGCCAAAGTGTTAGAGTTTGTAGCTGATTTTGGAAAGTCTACTGCACCCATTCCTGCTGCTA TTGTTGCTTGTGTTCCAAGAAAAGTTCACATTGAGGGAACCGGGGAAACAGAGTTCAGGATATCATCAACTGAAATTACTGATGCTATGAAAGCTGGATT GAATCAACCTATCGAGCCGGAGCCTGAGCTTGAGGTGCCAAAAGAACTGATCCAATCATCAACACTAGAAGAGTTAAAAATGCAACGCACGCCAGCCTTT GTTCCTATAAGTCCTGAAACCAATGCTACAAAGCTTTATGACGAGGAAACTGGGATCACCCGGCGCCGCCTTACAAATGGAATTCCTGTTAATTATAAGA TATCAAAAACTGAAACACAAAGTGGTGTTATGCGGCTGATTGTTGGTGGTGGACGAGCAGCTGAGAGTTCTGACTCAAGAGGATCTGTGATTGTAGGTGT TAGGACACTTAGCGAGGGAGGTCGTGTGGGCAACTTCTCAAGGGAGCAGGTTGAACTTTTCTGTGTGAACCACCTGATAAATTGCTCCTTGGAATCTACG GAGGAATTCATATCCATGGAGTTCCGTTTTACTTTAAGGGACAATGGGATGCGTGCAGCATTTCAGTTGCTTCACATGGTGCTTGAGCATAGTGTCTGGG TAGATGATGCTTTTGATAGAGCAAGGCAATTGTATCTTTCATATTATCGATCCATCCCAAAGAGCTTGGAACGCTCAACTGCTCACAAACTCATGGTAGC AATGTTAGATGGAGATGAGCGATTTATAGAGCCAACACCAAAATCACTAGAAAATTTAACCCTACAATCTGTTAAGGATGCAGTGATGAGTCAGTTTGTT GGTGATAACATGGAGGTTAGTATTGTAGGTGACTTCACGGAGGAGGAGATCGAGTCTTGTATACTTGATTACCTAGGCACAGCTCAGGCTGAAAGAAATC ATAAAAGAGAGCAAGAATTCAGTCCACCCTTGTTTCGACCATCCCCATCAGATTTGCAGTCTCAAGAAGTATTTTTGAAGGACACCGATGAGAGGGCATG TGCCTATATTGCTGGGCCAGCACCAAATCGTTGGGGTTTTACCGTTGATGGACAGGATCTGTTAGGGACAATTAGTAATGCATTAACAATCAATGATGAT CAGTCAAAATCTGTTGTTCCGCAAACAGAAGGCGGTCTGCGAAAAAGCCTTCGTGGCCATCCTCTTTTCTTTGGCATAACTATGGGGTTGCTTGCTGAGA TTATAAATTCTAGGCTATTCACAACGGTCAGAGATTCACTGGGGTTGACATATGATGTGTCATTTGAATTAAACCTATTTGACAGGCTTAAACTAGGATG GTATGTGATCTCAGTTACATCAACTCCAGGCAAGGTGCACAAAGCTGTTGATGCATGCAAGAACGTTCTTAGAGGTCTGCATAGCAACAAAATTACTGAG AGGGAATTGGACAGGGCTAAGCGGACCCTTCTTATGAGACATGAAGCTGAAATTAAGTCAAATGCCTACTGGCTGGGATTGTTAGCTCACTTGCAAGCTT CTTCTGTTCCAAGGAAGGACATATCTTGTATCAAGGACCTAACATTTCTATATGATGTTGCTACTGTTGAGGATGTATACCTTGCATATGAACAGTTGAA AGTGGATGAAAATTCTCTATACTCATGCATTGGGATAGCTGGTGCTCAGGCTGGACAAGAGATTGCAGCTCCTTTAGAAGTGGAAGAAGTGGGTGATGCT TACCCAGGTGTCATTCCTGTGGGGCGTGGTTTATCCACAATGACACGGCCAACTACCTGATGTTTTTGCCTGGTTGCTATAAAATCTGGAGGTTAGAACT CGTGGCTTGGCTAGTTGGCTTATTTAGTTCAGGCCCATTTATTGACCTCTGCCGGGATAATCCATATTTGATTATGTTCCATTATCTTTTTTCCTTTAGG TTGCAACACAATAGAATGATATTTCAATCTTATTTTATGGTTTCCCCTTCTCCCATCAAAAACACTTTTATTGTATGTGGTTTGGTGAGAGGATTAAACC AAGTTGTGCATAATATGCATACAGGAGCCATGTGAATGAGAAGATATGTTTGGAAGGATTAAGCAGCGTATGTGTCACAATTAGCTGCTGCATTCGCTTG ACATTCAAACAAGTCAAAATTCAAGCTGTTGGGTCAACCTAAACAAGTGATTCTTGTGTATTAATGAATTGTGTGCTCCCAATACTTTTATAGGATTAGA ATTTTGAAAAATATAGAATAATCCTTCACTAAGATAGTAAGATGTATAGGGGCCATATTTTTTGTTCCCCATTTATTCTGGGAACTCCGATCATATCTTG TTCTACTAATCCAGTCAGCTATACAAATTGTACTGCTCAACTACTCTCATCTATTCCCTATTATCTCTCGTTTTGGAGGAAAATATATATTTACAAATTC AAGATAATAATTAGATCTTCCATTTGGTTGCTTATATTTTCAGTTGGTGCTGAGATTTTATTGGAGCCAATCATAATGATGATATTTTCACAACTCTTAA TGGAGTAC
• Tissue: pods
• Gene name: LI_gene_177055;
• Additional information: details;

Expression of Ll_transcript_345544

FPKM

• PAB: 5.6
• PNAB: 4.7
• PS1: 3
• PS2: 2.9
• PS3: 3.2
• PW1: 4
• PW2: 4.4
• PW3: 3.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345544

• Blastp: Stromal processing peptidase, chloroplastic from Pisum with 86.92% of identity
• Blastx: Stromal processing peptidase, chloroplastic from Pisum with 87.17% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421372.1)
• Pfam: Peptidase M16 inactive domain (PF05193.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;