Id Trinity | TRINITY_DN50417_c0_g1_i18 |
---|---|
Name Transcript | Ll_transcript_345547 |
Sequence | AACAAGCTGAGCAAAAGGTTTCCAATTGGATTAGAAGAACAGATAAAGAAGTGGGATGCAGATAAACTAAGGAAATTTCACGAGCGTTGGTATTTCCCAG CAAATGCAACCTTGTACATCGTAGGGGATATTGATAACATCTCAAAGACTGTTTACCAAATTGAAGCAATTCTTGGACAAACTGGTGTCGAGAGTGAGAA GAGTTTGGTAGCCGTTCCAAGTGCATTTGGGGCAATGGCTAGTTTTCTTGTTCCTAAGCTTTCCGTTGGTCTGGTTGGAAACTCAAGTGAAAGATCAGCC AGTATTGACCAATCAAAAGTATACAGTAAGGAAAGACAAACTGTTCGCCCTCCTGTCAAGCATAATTGGTCATTTCCCGAAAGCAGTACCGTTTTGAAGC CACCAGAAATATTTCAACATGAGTTGCTTCAAAAATTTTCAATTAGTATGTTCTGCAAGATTCCAGTGAATAAGGTTCAGACATATGGTGATTTGCGTAA CGTGTTGATGAAAAGAATATTTCTGTCTGCTCTTCATTTTCGTACCAATACGAGATATAAGAGTTCAAATCCACCATTCACTTCATTTGAATTGGATCAT AGTGATTCTGGAAGGACAGGGTGTACTGTGACCACTCTTACCATAACTGCAGAACCGAAGAATTGGCAAAGTGCAATTAGAGTTGCTGTTCAAGAGGTTC GTAGGCTTAAAGAGCTTGGTATTACTCAGGGTGAATTAACTCGTTATTTAGATGCCCTTCTGAAAGATAGTGAACAGTTAGCAGCCATGATTGATAATGT ATCTTCTGTTGATAATCTGGATTTTATCATGGAAAGTGATGCTCTTGGCCATAAAATTATGGACCAGAGACAAGGGCATGAAAGTTTGCTCCTAGTTGCT GAGACAGTGACCCTCAAAGAGGTAAATTCTGTTGGTGCCAAGCTGTTAGAGTTTGTAGCTGATTTTGGAAAGCCTACTGCACCTGTTCCTGCTGCAATTG TTGCTTGTGTTCCAAGAAAAGTTCACATTGAGGGAACCGGTGAAACAGAATTCAAGATGTCGTCAATTGAAATTACTGATGCCATGAAAGCTGGATTGAA TCAACCTGTTGAGCCGGAGCCTGAGCTTGAAGTACCAAGAGAGCTGATACAATCATCAATGCTAGAAGAGTTAAAAATGCGGTGCAAGCCAGCCTTTATT CCTATTAGTCCTGAAATCAATTCTACAAAGCTTTATGATGAGGAAACTGGGATCACCCAGCGCCGTCTCACAAATGGAATTCCTGTTAATTATAAGATAT CAAAAACTGAAACACGAAGTGGTGTGATGCAGCTGATTGTTGGTGGTGGACGTGCAGCCGAGAGCTTTGATTCAAGAGGATCTGTGATTGTAGGTGTTAG GACACTTAGCGAGGGAGGTCGTGTTGGCAACTTCTCAAAGGAGCAGGTTCAACTTTTCTGTGTGAATCACCTGATAAACTGCTCCTTTGAATCTACGGAG GAATTCATATCTATGGAGTTACGTTTTACTTTAAGGGACAATGGAATGTGTGCAGCATTTCAGTTGCTTCACATGGTGCTTGAGCATAGTGTCTGGGTGG ATGATGCTTTTGATAGAGCAAGACAATTATATCTGTCATATTATCGATCCATCCCAAAGAGCTTGGAACGCTCAACTGCTCACAAACTCATGGTAGCAAT GTTAGATGGAGATGAGCGATTTGTTGAGCCAACACCAAAATCACTAGAAAATTTAACCCTGCAATCTGTTAAGGACGCAGTAATGAACCAGTTTGTTGGT GATAACATGGAGGTTAACATTGTAGGTGACTTCACCGAGGAGGAGATTGAGTCTTGTATCCTTAATTACCTCGGCACAGCTCAGGCCACAAGAAATCATA AAATAAAGCAAGAATTCAATCCACCTTTGTTTCGACCATCCCCATCTGATTTGCAGTCTCAAGAAGTATTTTTAAAGGACACTGATGAGAGGGCATGTGC ATATATTGCTGGGCCAGCACCTAACCGTTGGGGTTTTACTGTTGATGGAGAGGACCTGTTGGAGACAATTAATAATACATTACCAATCAATGGTGGTCTT TCTGGATTATATTTCTCTTTGTGACCCTCATACTCCACATTACATTTCAAAATCATTGTTAGTCATTAAATGCTGAAAATGGCTTGTGCAGATGATCAGT CAAGATCTGTTGCTAAACAAACACAAGGTGGTCTGCGGAGAAGCCTTCGTGGTCATCCTCTTTTCTTTGGCATAACTATGGGGTTGCTTGCTGAGATTAT AAAATCTAGGCTATTAACAACTGTCAGAGATTCACTGGGGTTGACATATGATGTGTCATTTGAATTAAACCTATTTGATCGGCTTAAACTAGGATGGTAT GTGATCCCAGTGACATCAACTCCAGGCAAGGTGCACAAAGCTGTTGACGCATGCAAGAATGTTATTAGAGGTCTGCGTAGCAACAAAATTACTGAGAGGG AATTGGACAGGGCTAAGCGGACCCTTCTTATGAAACACAAAGCTGAAATTACGTCAAATGCCTACTGGCTTCGATTGTTAGCTCACTTACAAGCTTCTTC TGTTCCAAGGAAGGACATATCTTGTATCAAGGACTTAACATTTCTATATGAAGTTGCTACTGTTGAGGATATATACCTTGCATATGAACAGTTGAAAGTG GATGAGAATTCTCTATACTCATGCGTTGGGATCGCTGGTGCTCAGGCTGCGTAAGAGATTGCAGGTGCAGCAGTATTCTCAAAATATTAACGTTGGATTT TGCTTTGCTTTTTCTCCAACCTTGGTACTAAAATCTAGACTTGTTTTCCAAAATGGCACATTAGCTTTATAATTAATTTTTCAGTCTCTAGGTTTGAACA TTAAGCTTATAATCTTGAAAGAATACTTAAAACAGAAAAGGTGAGAAATGGTATCCCATTTTAAGTTTAGCCTTTAAGTCTGATATGTTTATGATTAGAA GCATAAGAAATAATTCTTCTTCATATATTATTCAAAAGGCTAAGCAGTACATAAATAGGTAAAAAAAAAGAATATAAGAAGGAAACAATTAATTTATAAC TTATAATCGAATAGGAATCCTTACAAACAAGCAACAATTACAAAATTAAATAAAGACATGATCATATTCCATAAATTTTAGGATTCCTATCCAATACTCC CCCTCAAGCTATTGAATGGGTATCGGTCGTTCCCAGCTTGCCAACATTAAGCTCAAAATCTGACTTCAAATAGAGCCTTAGTTGAAATAACTGCTTCTTA TGACTTGGTTGAAACATAGAGTAGAGAAAGCCTGATTTTCCATTCCTGACTTGAATTTGTTGTCAATTCTTACATGCTTCATTCTGTCATGTTGTATTGG GTTATGTACTAAGCTTTATTTCCATTGTTAGGTGGGCAACTATGAAATCAAATTTTTTTGGAACATTAACTTATGAAAATGGGATTAGACCCACAGACTC ACCTTCCAAGATCAAATCACCTTAACAATCTGCAACAGATTGTAGCTGCTGCAAGCATTTTCAACACTTTCACAAACCCTTGTAGCTACTACACTCATAT CCAACACAACTAGCCAAACTCCACTAGCTACACAATATTCTTGAAGTCATGGGGGCCACTCCTGCCTCAATCTTAGAGCAACTCAATAATCCTTTTGAAG TTTTGAGATTGAATATTCACTTTAGCCTCCAAACCTTATGCAATGGATCAATTGGGTTTTCTTCTCAAAATCAACTACCCAACTTGCATGACCTTGAGGC ACTTCAACACTTGAATGGTGGGAGAAACAATAGTTGCATTGATGAGTCTCAAAAGTTTGATGAACAACTTGGGTTCATAAGTGTTGCTCCCACACATTTC GTACTTCCAAATATGGTTTCAGCCACACCTGAATTTTCCACAGTCAAGCAAGACGAAAACATGGTAAACCCAACTACCACCTTGCAAATGTGGGACACTG GTATGATTTCATGGAAGAAGATGCAAGTGATGCTTATTAGATCTCTGAGTAAGTGTTCTTCGACACTTGTTCTGGGTATGTATTTATGAGTATAATATCT ATAAACTGTCAGTCTAAAACTTTATGCGCATCATCCATCATTGGTTTATATTTTTCTTGAAAAATCAACAATGATTAAATATGAATAGTGGTAAATGATG CACTAACAATGTATAAAATTCTTACGGTTTATTTATTTTGTTCATCATACTTCTATCTATTCTTGTGTATGATACTTATATTGAACATGGTTTTTAGTTA TATGTAAAAAAAAATGATCTTATATATTTTCTC BLAST |
Tissue | pods |
Gene name | LI_gene_177055; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345547
Blastp | Stromal processing peptidase, chloroplastic from Pisum with 83.23% of identity |
---|---|
Blastx | Stromal processing peptidase, chloroplastic from Pisum with 79.89% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423435.1) |
Pfam | Peptidase M16 inactive domain (PF05193.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |