Id Trinity | TRINITY_DN50417_c0_g1_i19 |
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Name Transcript | Ll_transcript_345549 |
Sequence | AACAAGCTGAGCAAAAGGTTTCCAATTGGATTAGAAGAACAGATAAAGAAGTGGGATGCAGATAAACTAAGGAAATTTCACGAGCGTTGGTATTTCCCAG CAAATGCAACCTTGTACATCGTAGGGGATATTGATAACATCTCAAAGACTGTTTACCAAATTGAAGCAATTCTTGGACAAACTGGTGTCGAGAGTGAGAA GAGTTTGGTAGCCGTTCCAAGTGCATTTGGGGCAATGGCTAGTTTTCTTGTTCCTAAGCTTTCCGTTGGTCTGGTTGGAAACTCAAGTGAAAGATCAGCC AGTATTGACCAATCAAAAGTATACAGTAAGGAAAGACAAACTGTTCGCCCTCCTGTCAAGCATAATTGGTCATTTCCCGAAAGCAGTACCGTTTTGAAGC CACCAGAAATATTTCAACATGAGTTGCTTCAAAAATTTTCAATTAGTATGTTCTGCAAGATTCCAGTGAATAAGGTTCAGACATATGGTGATTTGCGTAA CGTGTTGATGAAAAGAATATTTCTGTCTGCTCTTCATTTTCGTACCAATACGAGATATAAGAGTTCAAATCCACCATTCACTTCATTTGAATTGGATCAT AGTGATTCTGGAAGGACAGGGTGTACTGTGACCACTCTTACCATAACTGCAGAACCGAAGAATTGGCAAAGTGCAATTAGAGTTGCTGTTCAAGAGGTTC GTAGGCTTAAAGAGCTTGGTATTACTCAGGGTGAATTAACTCGTTATTTAGATGCCCTTCTGAAAGATAGTGAACAGTTAGCAGCCATGATTGATAATGT ATCTTCTGTTGATAATCTGGATTTTATCATGGAAAGTGATGCTCTTGGCCATAAAATTATGGACCAGAGACAAGGGCATGAAAGTTTGCTCCTAGTTGCT GAGACAGTGACCCTCAAAGAGGTAAATTCTGTTGGTGCCAAGCTGTTAGAGTTTGTAGCTGATTTTGGAAAGCCTACTGCACCTGTTCCTGCTGCAATTG TTGCTTGTGTTCCAAGAAAAGTTCACATTGAGGGAACCGGTGAAACAGAATTCAAGATGTCGTCAATTGAAATTACTGATGCCATGAAAGCTGGATTGAA TCAACCTGTTGAGCCGGAGCCTGAGCTTGAAGTACCAAGAGAGCTGATACAATCATCAATGCTAGAAGAGTTAAAAATGCGGTGCAAGCCAGCCTTTATT CCTATTAGTCCTGAAATCAATTCTACAAAGCTTTATGATGAGGAAACTGGGATCACCCAGCGCCGTCTCACAAATGGAATTCCTGTTAATTATAAGATAT CAAAAACTGAAACACGAAGTGGTGTGATGCAGCTGATTGTTGGTGGTGGACGTGCAGCCGAGAGCTTTGATTCAAGAGGATCTGTGATTGTAGGTGTTAG GACACTTAGCGAGGGAGGTCGTGTTGGCAACTTCTCAAAGGAGCAGGTTCAACTTTTCTGTGTGAATCACCTGATAAACTGCTCCTTTGAATCTACGGAG GAATTCATATCTATGGAGTTACGTTTTACTTTAAGGGACAATGGAATGTGTGCAGCATTTCAGTTGCTTCACATGGTGCTTGAGCATAGTGTCTGGGTGG ATGATGCTTTTGATAGAGCAAGACAATTATATCTGTCATATTATCGATCCATCCCAAAGAGCTTGGAACGCTCAACTGCTCACAAACTCATGGTAGCAAT GTTAGATGGAGATGAGCGATTTGTTGAGCCAACACCAAAATCACTAGAAAATTTAACCCTGCAATCTGTTAAGGACGCAGTAATGAACCAGTTTGTTGGT GATAACATGGAGGTTAACATTGTAGGTGACTTCACCGAGGAGGAGATTGAGTCTTGTATCCTTAATTACCTCGGCACAGCTCAGGCCACAAGAAATCATA AAATAAAGCAAGAATTCAATCCACCTTTGTTTCGACCATCCCCATCTGATTTGCAGTCTCAAGAAGTATTTTTAAAGGACACTGATGAGAGGGCATGTGC ATATATTGCTGGGCCAGCACCTAACCGTTGGGGTTTTACTGTTGATGGAGAGGACCTGTTGGAGACAATTAATAATACATTACCAATCAATGATGATCAG TCAAGATCTGTTGCTAAACAAACACAAGGTGGTCTGCGGAGAAGCCTTCGTGGTCATCCTCTTTTCTTTGGCATAACTATGGGGTTGCTTGCTGAGATTA TAAAATCTAGGCTATTAACAACTGTCAGAGATTCACTGGGGTTGACATATGATGTGTCATTTGAATTAAACCTATTTGATCGGCTTAAACTAGGATGGTA TGTGATCCCAGTGACATCAACTCCAGGCAAGGTGCACAAAGCTGTTGACGCATGCAAGAATGTTATTAGAGGTCTGCGTAGCAACAAAATTACTGAGAGG GAATTGGACAGGGCTAAGCGGACCCTTCTTATGAAACACAAAGCTGAAATTACGTCAAATGCCTACTGGCTTCGATTGTTAGCTCACTTACAAGCTTCTT CTGTTCCAAGGAAGGACATATCTTGTATCAAGGACTTAACATTTCTATATGAAGTTGCTACTGTTGAGGATATATACCTTGCATATGAACAGTTGAAAGT GGATGAGAATTCTCTATACTCATGCGTTGGGATCGCTGGTGCTCAGGCTGCGTAAGAGATTGCAGGTGCAGCAGTATTCTCAAAATATTAACGTTGGATT TTGCTTTGCTTTTTCTCCAACCTTGGTACTAAAATCTAGACTTGTTTTCCAAAATGGCACATTAGCTTTATAATTAATTTTTCAGTCTCTAGGTTTGAAC ATTAAGCTTATAATCTTGAAAGAATACTTAAAACAGAAAAGGTGAGAAATGGTATCCCATTTTAAGTTTAGCCTTTAAGTCTGATATGTTTATGATTAGA AGCATAAGAAATAATTCTTCTTCATATATTATTCAAAAGGCTAAGCAGTACATAAATAGGTAAAAAAAAAGAATATAAGAAGGAAACAATTAATTTATAA CTTATAATCGAATAGGAATCCTTACAAACAAGCAACAATTACAAAATTAAATAAAGACATGATCATATTCCATAAATTTTAGGATTCCTATCCAATACTC CCCCTCAAGCTATTGAATGGGTATCGGTCGTTCCCAGCTTGCCAACATTAAGCTCAAAATCTGACTTCAAATAGAGCCTTAGTTGAAATAACTGCTTCTT ATGACTTGGTTGAAACATAGAGTAGAGAAAGCCTGATTTTCCATTCCTGACTTGAATTTGTTGTCAATTCTTACATGCTTCATTCTGTCATGTTGTATTG GGTTATGTACTAAGCTTTATTTCCATTGTTAGGTGGGCAACTATGAAATCAAATTTTTTTGGAACATTAACTTATGAAAATGGGATTAGACCCACAGACT CACCTTCCAAGATCAAATCACCTTAACAATCTGCAACAGATTGTAGCTGCTGCAAGCATTTTCAACACTTTCACAAACCCTTGTAGCTACTACACTCATA TCCAACACAACTAGCCAAACTCCACTAGCTACACAATATTCTTGAAGTCATGGGGGCCACTCCTGCCTCAATCTTAGAGCAACTCAATAATCCTTTTGAA GTTTTGAGATTGAATATTCACTTTAGCCTCCAAACCTTATGCAATGGATCAATTGGGTTTTCTTCTCAAAATCAACTACCCAACTTGCATGACCTTGAGG CACTTCAACACTTGAATGGTGGGAGAAACAATAGTTGCATTGATGAGTCTCAAAAGTTTGATGAACAACTTGGGTTCATAAGTGTTGCTCCCACACATTT CGTACTTCCAAATATGGTTTCAGCCACACCTGAATTTTCCACAGTCAAGCAAGACGAAAACATGGTAAACCCAACTACCACCTTGCAAATGTGGGACACT GGTATGATTTCATGGAAGAAGATGCAAGTGATGCTTATTAGATCTCTGAGTAAGTGTTCTTCGACACTTGTTCTGGGTATGTATTTATGAGTATAATATC TATAAACTGTCAGTCTAAAACTTTATGCGCATCATCCATCATTGGTTTATATTTTTCTTGAAAAATCAACAATGATTAAATATGAATAGTGGTAAATGAT GCACTAACAATGTATAAAATTCTTACGGTTTATTTATTTTGTTCATCATACTTCTATCTATTCTTGTGTATGATACTTATATTGAACATGGTTTTTAGTT ATATGTAAAAAAAAATGATCTTATATATTTTCTC BLAST |
Tissue | pods |
Gene name | LI_gene_177055; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345549
Blastp | Stromal processing peptidase, chloroplastic from Pisum with 82.65% of identity |
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Blastx | Stromal processing peptidase, chloroplastic from Pisum with 82.9% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423434.1) |
Pfam | Peptidase M16 inactive domain (PF05193.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |