Ll_transcript_345530

• Id Trinity: TRINITY_DN50417_c0_g1_i3
• Name Transcript: Ll_transcript_345530
• Sequence: AACAAGCTGAGCAAAAGGTTTCCAATTGGATTAGAAGAACAGATAAAGAAGTGGGATGCAGATAAACTAAGGAAATTTCACGAGCGTTGGTATTTCCCAG CAAATGCAACCTTGTACATCGTAGGGGATATTGATAACATCTCAAAGACTGTTTACCAAATTGAAGCAATTCTTGGACAAACTGGTGTCGAGAGTGAGAA GAGTTTGGTAGCCGTTCCAAGTGCATTTGGGGCAATGGCTAGTTTTCTTGTTCCTAAGCTTTCCGTTGGTCTGGTTGGAAACTCAAGTGAAAGATCAGCC AGTATTGACCAATCAAAAGTATACAGTAAGGAAAGACAAACTGTTCGCCCTCCTGTCAAGCATAATTGGTCATTTCCCGAAAGCAGTACCGTTTTGAAGC CACCAGAAATATTTCAACATGAGTTGCTTCAAAAATTTTCAATTAGTATGTTCTGCAAGATTCCAGTGAATAAGGTTCAGACATATGGTGATTTGCGTAA CGTGTTGATGAAAAGAATATTTCTGTCTGCTCTTCATTTTCGTACCAATACGAGATATAAGAGTTCAAATCCACCATTCACTTCATTTGAATTGGATCAT AGTGATTCTGGAAGGACAGGGTGTACTGTGACCACTCTTACCATAACTGCAGAACCGAAGAATTGGCAAAGTGCAATTAGAGTTGCTGTTCAAGAGGTTC GTAGGCTTAAAGAGCTTGGTATTACTCAGGGTGAATTAACTCGTTATTTAGATGCCCTTCTGAAAGATAGTGAACAGTTAGCAGCCATGATTGATAATGT ATCTTCTGTTGATAATCTGGATTTTATCATGGAAAGTGATGCTCTTGGCCATAAAATTATGGACCAGAGACAAGGGCATGAAAGTTTGCTCCTAGTTGCT GAGACAGTGACCCTCAAAGAGGTAAATTCTGTTGGTGCCAAGCTGTTAGAGTTTGTAGCTGATTTTGGAAAGCCTACTGCACCTGTTCCTGCTGCAATTG TTGCTTGTGTTCCAAGAAAAGTTCACATTGAGGGAACCGGTGAAACAGAATTCAAGATGTCGTCAATTGAAATTACTGATGCCATGAAAGCTGGATTGAA TCAACCTGTTGAGCCGGAGCCTGAGCTTGAAGTACCAAGAGAGCTGATACAATCATCAATGCTAGAAGAGTTAAAAATGCGGTGCAAGCCAGCCTTTATT CCTATTAGTCCTGAAATCAATTCTACAAAGCTTTATGATGAGGAAACTGGGATCACCCAGCGCCGTCTCACAAATGGAATTCCTGTTAATTATAAGATAT CAAAAACTGAAACACGAAGTGGTGTGATGCAGCTGATTGTTGGTGGTGGACGTGCAGCCGAGAGCTTTGATTCAAGAGGATCTGTGATTGTAGGTGTTAG GACACTTAGCGAGGGAGGTCGTGTTGGCAACTTCTCAAAGGAGCAGGTTCAACTTTTCTGTGTGAATCACCTGATAAACTGCTCCTTTGAATCTACGGAG GAATTCATATCTATGGAGTTACGTTTTACTTTAAGGGACAATGGAATGTGTGCAGCATTTCAGTTGCTTCACATGGTGCTTGAGCATAGTGTCTGGGTGG ATGATGCTTTTGATAGAGCAAGACAATTATATCTGTCATATTATCGATCCATCCCAAAGAGCTTGGAACGCTCAACTGCTCACAAACTCATGGTAGCAAT GTTAGATGGAGATGAGCGATTTGTTGAGCCAACACCAAAATCACTAGAAAATTTAACCCTGCAATCTGTTAAGGACGCAGTAATGAACCAGTTTGTTGGT GATAACATGGAGGTTAACATTGTAGGTGACTTCACCGAGGAGGAGATTGAGTCTTGTATCCTTAATTACCTCGGCACAGCTCAGGCCACAAGAAATCATA AAATAAAGCAAGAATTCAATCCACCTTTGTTTCGACCATCCCCATCTGATTTGCAGTCTCAAGAAGTATTTTTAAAGGACACTGATGAGAGGGCATGTGC ATATATTGCTGGGCCAGCACCTAACCGTTGGGGTTTTACTGTTGATGGAGAGGACCTGTTGGAGACAATTAATAATACATTACCAATCAATGGTGGTCTT TCTGGATTATATTTCTCTTTGTGACCCTCATACTCCACATTACATTTCAAAATCATTGTTAGTCATTAAATGCTGAAAATGGCTTGTGCAGATGATCAGT CAAGATCTGTTGCTAAACAAACACAAGGTGGTCTGCGGAGAAGCCTTCGTGGTCATCCTCTTTTCTTTGGCATAACTATGGGGTTGCTTGCTGAGATTAT AAAATCTAGGCTATTAACAACTGTCAGAGATTCACTGGGGTTGACATATGATGTGTCATTTGAATTAAACCTATTTGATCGGCTTAAACTAGGATGGTAT GTGATCCCAGTGACATCAACTCCAGGCAAGGTGCACAAAGCTGTTGACGCATGCAAGAATGTTATTAGAGGTCTGCGTAGCAACAAAATTACTGAGAGGG AATTGGACAGGGCTAAGCGGACCCTTCTTATGAAACACAAAGCTGAAATTACGTCAAATGCCTACTGGCTTCGATTGTTAGCTCACTTACAAGCTTCTTC TGTTCCAAGGAAGGACATATCTTGTATCAAGGACTTAACATTTCTATATGAAGTTGCTACTGTTGAGGATATATACCTTGCATATGAACAGTTGAAAGTG GATGAGAATTCTCTATACTCATGCGTTGGGATCGCTGGTGCTCAGGCTGCGTAAGAGATTGCAGGTGGGCAACTATGAAATCAAATTTTTTTGGAACATT AACTTATGAAAATGGGATTAGACCCACAGACTCACCTTCCAAGATCAAATCACCTTAACAATCTGCAACAGATTGTAGCTGCTGCAAGCATTTTCAACAC TTTCACAAACCCTTGTAGCTACTACACTCATATCCAACACAACTAGCCAAACTCCACTAGCTACACAATATTCTTGAAGTCATGGGGGCCACTCCTGCCT CAATCTTAGAGCAACTCAATAATCCTTTTGAAGTTTTGAGATTGAATATTCACTTTAGCCTCCAAACCTTATGCAATGGATCAATTGGGTTTTCTTCTCA AAATCAACTACCCAACTTGCATGACCTTGAGGCACTTCAACACTTGAATGGTGGGAGAAACAATAGTTGCATTGATGAGTCTCAAAAGTTTGATGAACAA CTTGGGTTCATAAGTGTTGCTCCCACACATTTCGTACTTCCAAATATGGTTTCAGCCACACCTGAATTTTCCACAGTCAAGCAAGACGAAAACATGGTAA ACCCAACTACCACCTTGCAAATGTGGGACACTGGTATGATTTCATGGAAGAAGATGCAAGTGATGCTTATTAGATCTCTGAGTAAGTGTTCTTCGACACT TGTTCTGGGTATGTATTTATGAGTATAATATCTATAAACTGTCAGTCTAAAACTTTATGCGCATCATCCATCATTGGTTTATATTTTTCTTGAAAAATCA ACAATGATTAAATATGAATAGTGGTAAATGATGCACTAACAATGTATAAAATTCTTACGGTTTATTTATTTTGTTCATCATACTTCTATCTATTCTTGTG TATGATACTTATATTGAACATGGTTTTTAGTTATATGTAAAAAAAAATGATCTTATATATTTTCTC
• Tissue: pods
• Gene name: LI_gene_177055;
• Additional information: details;

Expression of Ll_transcript_345530

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.2
• PS3: 0.1
• PW1: 0.2
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345530

• Blastp: Stromal processing peptidase, chloroplastic from Pisum with 83.23% of identity
• Blastx: Stromal processing peptidase, chloroplastic from Pisum with 79.89% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423435.1)
• Pfam: Peptidase M16 inactive domain (PF05193.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;