Ll_transcript_346480

Id TrinityTRINITY_DN50420_c2_g1_i11
Name TranscriptLl_transcript_346480
SequenceATTAAGCTAATGTTGAAGATATGAATTAATGAACCACACTCCCTCAACTTGTTATTCTCACCATTCTCATCCATGACCCTCTGAACTCAACTTCACTTCA CTTCCTCATTCATGGCTATTCGTGCCTTCAACCCTCGCTACTCCCTCTTCTCTTCTCCCACTCCCACTCTCTCCTCCTTCCTCCACCGCCGCCACACCGT TCCCCGCTGCTTCCGCTCCCTTCCGTTCCCTCCTCAACCGCCGTTCCTCTCCGTTTACCGCCGTCAAATTCGCTCCGTTCATGGCCTCTTCGATAGCGTC ATGGAGGAGCTCCAGGCCATGCGCAAACGCAGGAAAATAGTTTCCAATGCTTCCAAGTCCATCATGGGATTGTTGAATGAAGAACTTGTGGAAGATAGGA TTGTCAACCGTTCATTGCAAAAAGGGTTGCTTTTGGAGTTCAAGGGGGATTCTAATAGAATATTGTTAGTGGTTTCTCAAAGACCCGATGGCAAGAAGAA GTGGATGGTTTCTGATCAGAATGGTGTCACTTCTTCCATTAAGCCACGTCAAGTAACCTACATTGTTCCTGGTATTCACAATTTTGACCCAGCAGATATT GCAGATTTTGCTCAGAAAGCTCAGGACAACATGGATTTGTCACTACTTGAATTTGCTTGGGCTGAGCTCCTTGAAAAGAATAAATCTGTGACAGTTGAAG AGTTAGCTGAGATAATTTTTGGCAGTGCTGAGCCTCTTGAGAGCTATTCTGCTCACATGTTGCTGTCAAAAGATGAAGTATACTTCACTGTGCTTGAGAA TAAAGGACCTTGTTCCATCTATGGACCTCGACCTAGTAAGGAGGTTGAGGAGCTTATTCGTAGGAAACTTGCAAAAGAAGCTTATGAGAAAGAATTTCAG GAGTTTATTGAATTGCTGGCATCCGCAAAATCGATGCCTTCACAAGATAAACCTCCTAAATCTTCCTGGATGGATGAGGAGAAAATTCGGAGTAGAATTG AGTCACTTGAAGCATATGCTATTGATGCATGTAAAAATGACGAACAAAGAAAAACAGCTGAGATGGTATCTTCTTCCCTCAAACCCTAGTTTTTTTTACT TAATGTAGCAATGGATCAAATAGTGAATTTCTCCATGTAAGGAAAATGGGGAAGAGTGAAAACAAGCATTTTGTCACTTACAGAAAGTACTACTTTCTTA AAGTGTGAAATGCCAATCTTGGTATTCAGTTGTCTCTTGTTTCATGTTTTCTGCCAAATATACGATAAAAGGAGTAATCGTAGACATATTACCAATTGTT TTTTCTAAACAGAGTCCGAAAGCTTCATTTTATTGGTCCAGCCAAGCCAACCATAAGTTTTTCGAAATTTCGAGTCAAATAGTAATCGGGATATCCCCCA CTTCAATAATAAAAATCTTACTGTAATTATGTACCAAAGGAATTTTGTATATAATAAAAATGGGTGTTTAAACTCATTCATAGTTTTATTTATGTAATTG GAGTTGACTTGTTCTTCTACTAAGTTCTTTTGTGCCACAAGCAGACACTTACGGAAATAGATCTGGCAAAAACAGCTTCTTCAGCTGTGAATCTCCTAGT AGATATTGGGTATTTTCCTGTACACGTCAATCTTGATTTGTTGAAGTTGAGTATTCCCACTGATCATTCAGCTGAAAACATATCAGTTGCTCAAAGTCTT CTATCAAACTCATATGATCAAGATGAGATCAATAGGAAGAATCTTACTGATTTAAAGGTTTATGCCATTGATGTTGATGAGGCTGATGAGCTTGATGATG CTCTGAGTGCAAAGAAGTTGCAAGATGGTCGAATTAAAGTTTGGATACATGTTGCAGACCCAACTAGATATGTTGAAACTGGGAGCATTATGGATAGGGA GGCTATGAGAAGAGGAACTTCTGTTTTCTTGCCCACTGCCACATATCCTATGTTTCCAGAAAAGCTTGCGATGGGGGGTATGAGTTTGCGACAAGGAGAG CTTTGTAATGCTGTTACTGTATCAGTTGTGCTGCATAATGATGGCAGCATTGCAGAATGTTCAGTGGTTAACTCAGTGATTAAGCCAACATATATGCTGA CATATGAGAGTGCATCTGAGCTACTGCATTTGAACCTGGAGGAGGAGGGCGAACTCAGAATTTTGTCCGAGGCTGCAAACCTTCGTTTAAATTGGCGCCG TCAACAGGGTGCTGTTGACACAGCAACATTAGATACTCGCATTAAAGTGTCTAATGCAGAGAGTGAAGAGCCATTAATAAATATTTATGTCGAAAACCAG GCAGACCCAGCAATGCGACTGGTCTCTGAAATGATGATACTCTGTGGTGAAGCCATGGCCACATTTGGGTCCCATAATGATATTCCTTTACCCTACAGGG GACAGCCCCAGTCACATATTAATGTTTCTGAATTTGCACACCTTCCAGAAGGGCCTGTTAGGAGCTTTGCCCTGGTCAAAGTAATGCGTGCTGCACAACT TGATTTCAGGAAGCCAGCACGCCATGGGGTTTTGGGAATTCCTGGTTATGTTCAATTTACATCTCCCATCCGTAGATATTTGGATCTTCTGGCTCACTAT CAGGTAAAGGCATTCCTTAGGGGTGAGCCTCCACCATTTTCACCCGGCAAGCTTGAAGGAATAGCAGCAGTAGTAAATATGAAATTTAGAGCAGCGAGGA AGCTCTGCAGCAGTAGTCTTCGATACTGGATATTGGAATATTTACGAAGACAACCAAAAGAGAAAATATATCGAGCATTGGTACTTAGATTTATTAAAGA TCGAATTGCAGCTCTATTGTTGGTTGAGGTTGGATTTCAAGCTTCTACCTTGGTCTCTGTTGGAACTCACATAGGGGATGAAATATTAGTTAAGGTCGAA GAAGCACATCCTCGTGATGATATTATTTTTCTGAAGGAGGTCATAAAAGGTTGACTTAAGAGTTAAGAAATGTTTATGAGAAAGGCTTCCAATGTAAAAA TTATTCAAAAAGGTAATCAACTTTCTATGCATTCCTCCCAATTCTATATTTTTGTCAACGACAGCGAACCAAACCGTCCTCACTCAGCTGGGCGGCTAGG ATGCTCCCTCATCTTTTGGCATCGAAGAAATATCACGCTTCACCGGAAAAATCTCAACCTTTTAAACTTTGTCAAGCTGTTCAAATTTTGTAGTACCATT CTGGCAGAGAAATTCAGGATAGTTCTAGCCAGCATATCCAACCTTCATCACTCCGGCAGTGTACAGTCCTTCTCATTGTATCTGATCATACGGCGGCATA AAGTTAGCAGGTTTTCTCCCTCATAAGCGAGCAAGATTTGTCGGTTCCGTTGATTTGGTAAGTATTTCCTTGGCATGAGCTAGTTATAGTAATTTTTCAC CTTTTCTACCTGAGAATTCATGGTTAAGATTTTATTTCATTAATTTACTTTCTTGTATATGCCAGGCTTTGCAACTTTACATAAATATGTAATTGAGTTT CATTATTGTAATCTTACACACTTTGTGCCAAAAGATATAAGGATCTGAATTGCAAGTTGCAATACAGGGTCATATGAAGAGACATTTATAACTATAATTT ATTATGAAGAGGATATGAG BLAST
Tissuepods
Gene nameLI_gene_177097; 
Additional informationdetails; 

Expression of Ll_transcript_346480

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_346480
BlastpRibonuclease II, chloroplastic/mitochondrial from Arabidopsis with 50.58% of identity
BlastxRibonuclease II, chloroplastic/mitochondrial from Arabidopsis with 73.66% of identity
Eggnog3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (By similarity)(COG0557)
KeggLink to kegg annotations (AT5G02250)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019464581.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;