Ll_transcript_346483

• Id Trinity: TRINITY_DN50420_c2_g1_i13
• Name Transcript: Ll_transcript_346483
• Sequence: ATTAAGCTAATGTTGAAGATATGAATTAATGAACCACACTCCCTCAACTTGTTATTCTCACCATTCTCATCCATGACCCTCTGAACTCAACTTCACTTCA CTTCCTCATTCATGGCTATTCGTGCCTTCAACCCTCGCTACTCCCTCTTCTCTTCTCCCACTCCCACTCTCTCCTCCTTCCTCCACCGCCGCCACACCGT TCCCCGCTGCTTCCGCTCCCTTCCGTTCCCTCCTCAACCGCCGTTCCTCTCCGTTTACCGCCGTCAAATTCGCTCCGTTCATGGCCTCTTCGATAGCGTC ATGGAGGAGCTCCAGGCCATGCGCAAACGCAGGAAAATAGTTTCCAATGCTTCCAAGTCCATCATGGGATTGTTGAATGAAGAACTTGTGGAAGATAGGA TTGTCAACCGTTCATTGCAAAAAGGGTTGCTTTTGGAGTTCAAGGGGGATTCTAATAGAATATTGTTAGTGGTTTCTCAAAGACCCGATGGCAAGAAGAA GTGGATGGTTTCTGATCAGAATGGTGTCACTTCTTCCATTAAGCCACGTCAAGTAACCTACATTGTTCCTGGTATTCACAATTTTGACCCAGCAGATATT GCAGATTTTGCTCAGAAAGCTCAGGACAACATGGATTTGTCACTACTTGAATTTGCTTGGGCTGAGCTCCTTGAAAAGAATAAATCTGTGACAGTTGAAG AGTTAGCTGAGATAATTTTTGGCAGTGCTGAGCCTCTTGAGAGCTATTCTGCTCACATGTTGCTGTCAAAAGATGAAGTATACTTCACTGTGCTTGAGAA TAAAGGACCTTGTTCCATCTATGGACCTCGACCTAGTAAGGAGGTTGAGGAGCTTATTCGTAGGAAACTTGCAAAAGAAGCTTATGAGAAAGAATTTCAG GAGTTTATTGAATTGCTGGCATCCGCAAAATCGATGCCTTCACAAGATAAACCTCCTAAATCTTCCTGGATGGATGAGGAGAAAATTCGGAGTAGAATTG AGTCACTTGAAGCATATGCTATTGATGCATGTAAAAATGACGAACAAAGAAAAACAGCTGAGATGACACTTACGGAAATAGATCTGGCAAAAACAGCTTC TTCAGCTGTGAATCTCCTAGTAGATATTGGGTATTTTCCTGTACACGTCAATCTTGATTTGTTGAAGTTGAGTATTCCCACTGATCATTCAGCTGAAAAC ATATCAGTTGCTCAAAGTCTTCTATCAAACTCATATGATCAAGATGAGATCAATAGGAAGAATCTTACTGATTTAAAGGTTTATGCCATTGATGTTGATG AGGCTGATGAGCTTGATGATGCTCTGAGTGCAAAGAAGTTGCAAGATGGTCGAATTAAAGTTTGGATACATGTTGCAGACCCAACTAGATATGTTGAAAC TGGGAGCATTATGGATAGGGAGGCTATGAGAAGAGGAACTTCTGTTTTCTTGCCCACTGCCACATATCCTATGTTTCCAGAAAAGCTTGCGATGGGGGGT ATGAGTTTGCGACAAGGAGAGCTTTGTAATGCTGTTACTGTATCAGTTGTGCTGCATAATGATGGCAGCATTGCAGAATGTTCAGTGGTTAACTCAGTGA TTAAGCCAACATATATGCTGACATATGAGAGTGCATCTGAGCTACTGCATTTGAACCTGGAGGAGGAGGGCGAACTCAGAATTTTGTCCGAGGCTGCAAA CCTTCGTTTAAATTGGCGCCGTCAACAGGGTGCTGTTGACACAGCAACATTAGATACTCGCATTAAAGTGTCTAATGCAGAGAGTGAAGAGCCATTAATA AATATTTATGTCGAAAACCAGGCAGACCCAGCAATGCGACTGGTCTCTGAAATGATGATACTCTGTGGTGAAGCCATGGCCACATTTGGGTCCCATAATG ATATTCCTTTACCCTACAGGGGACAGCCCCAGTCACATATTAATGTTTCTGAATTTGCACACCTTCCAGAAGGGCCTGTTAGGAGCTTTGCCCTGGTCAA AGTAATGCGTGCTGCACAACTTGATTTCAGGAAGCCAGCACGCCATGGGGTTTTGGGAATTCCTGGTTATGTTCAATTTACATCTCCCATCCGTAGATAT TTGGATCTTCTGGCTCACTATCAGGTAAAGGCATTCCTTAGGGGTGAGCCTCCACCATTTTCACCCGGCAAGCTTGAAGGAATAGCAGCAGTAGTAAATA TGAAATTTAGAGCAGCGAGGAAGCTCTGCAGCAGTAGTCTTCGATACTGGATATTGGAATATTTACGAAGACAACCAAAAGAGAAAATATATCGAGCATT GGTACTTAGATTTATTAAAGATCGAATTGCAGCTCTATTGTTGGTTGAGGTTGGATTTCAAGCTTCTACCTTGGTCTCTGTTGGAACTCACATAGGGGAT GAAATATTAGTTAAGGTCGAAGAAGCACATCCTCGTGATGATATTATTTTTCTGAAGGAGGTCATAAAAGGTTGACTTAAGAGTTAAGAAATGTTTATGA GAAAGGCTTCCAATGTAAAAATTATTCAAAAAGGTAATCAACTTTCTATGCATTCCTCCCAATTCTATATTTTTGTCAACGACAGCGAACCAAACCGTCC TCACTCAGCTGGGCGGCTAGGATGCTCCCTCATCTTTTGGCATCGAAGAAATATCACGCTTCACCGGAAAAATCTCAACCTTTTAAACTTTGTCAAGCTG TTCAAATTTTGTAGTACCATTCTGGCAGAGAAATTCAGGATAGTTCTAGCCAGCATATCCAACCTTCATCACTCCGGCAGTGTACAGTCCTTCTCATTGT ATCTGATCATACGGCGGCATAAAGTTAGCAGGTTTTCTCCCTCATAAGCGAGCAAGATTTGTCGGTTCCGTTGATTTGGTAAGTATTTCCTTGGCATGAG CTAGTTATAGTAATTTTTCACCTTTTCTACCTGAGAATTCATGGTTAAGATTTTATTTCATTAATTTACTTTCTTGTATATGCCAGGCTTTGCAACTTTA CATAAATATGTAATTGAGTTTCATTATTGTAATCTTACACACTTTGTGCCAAAAGATATAAGGATCTGAATTGCAAGTTGCAATACAGGGTCATATGAAG AGACATTTATAACTATAATTTATTATGAAGAGGATATGAG
• Tissue: pods
• Gene name: LI_gene_177097;
• Additional information: details;

Expression of Ll_transcript_346483

FPKM

• PAB: 0
• PNAB: 1.7
• PS1: 1.2
• PS2: 0.9
• PS3: 1.6
• PW1: 0.7
• PW2: 0.4
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346483

• Blastp: Ribonuclease II, chloroplastic/mitochondrial from Arabidopsis with 64.1% of identity
• Blastx: Ribonuclease II, chloroplastic/mitochondrial from Arabidopsis with 67.94% of identity
• Eggnog: 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (By similarity)(COG0557)
• Kegg: Link to kegg annotations (AT5G02250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464581.1)
• Pfam: RNB domain (PF00773.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;