Ll_transcript_346458

Id TrinityTRINITY_DN50420_c2_g1_i3
Name TranscriptLl_transcript_346458
SequenceATTAAGCTAATGTTGAAGATATGAATTAATGAACCACACTCCCTCAACTTGTTATTCTCACCATTCTCATCCATGACCCTCTGAACTCAACTTCACTTCA CTTCCTCATTCATGGCTATTCGTGCCTTCAACCCTCGCTACTCCCTCTTCTCTTCTCCCACTCCCACTCTCTCCTCCTTCCTCCACCGCCGCCACACCGT TCCCCGCTGCTTCCGCTCCCTTCCGTTCCCTCCTCAACCGCCGTTCCTCTCCGTTTACCGCCGTCAAATTCGCTCCGTTCATGGCCTCTTCGATAGCGTC ATGGAGGAGCTCCAGGCCATGCGCAAACGCAGGAAAATAGTTTCCAATGCTTCCAAGTCCATCATGGGATTGTTGAATGAAGAACTTGTGGAAGATAGGA TTGTCAACCGTTCATTGCAAAAAGGGTTGCTTTTGGAGTTCAAGGGGGATTCTAATAGAATATTGTTAGTGGTTTCTCAAAGACCCGATGGCAAGAAGAA GTGGATGGTTTCTGATCAGGTTCTAGTAGAAACAACATAATGCGGCATGTTTAATAGAATGGTGTCACTTCTTCCATTAAGCCACGTCAAGTAACCTACA TTGTTCCTGGTATTCACAATTTTGACCCAGCAGATATTGCAGATTTTGCTCAGAAAGCTCAGGACAACATGGATTTGTCACTACTTGAATTTGCTTGGGC TGAGCTCCTTGAAAAGAATAAATCTGTGACAGTTGAAGAGTTAGCTGAGATAATTTTTGGCAGTGCTGAGCCTCTTGAGAGCTATTCTGCTCACATGTTG CTGTCAAAAGATGAAGTATACTTCACTGTGCTTGAGAATAAAGGACCTTGTTCCATCTATGGACCTCGACCTAGTAAGGAGGTTGAGGAGCTTATTCGTA GGAAACTTGCAAAAGAAGCTTATGAGAAAGAATTTCAGGAGTTTATTGAATTGCTGGCATCCGCAAAATCGATGCCTTCACAAGATAAACCTCCTAAATC TTCCTGGATGGATGAGGAGAAAATTCGGAGTAGAATTGAGTCACTTGAAGCATATGCTATTGATGCATGTAAAAATGACGAACAAAGAAAAACAGCTGAG ATGGTATCTTCTTCCCTCAAACCCTAGTTTTTTTTACTTAATGTAGCAATGGATCAAATAGTGAATTTCTCCATGTAAGGAAAATGGGGAAGAGTGAAAA CAAGCATTTTGTCACTTACAGAAAGTACTACTTTCTTAAAGTGTGAAATGCCAATCTTGGTATTCAGTTGTCTCTTGTTTCATGTTTTCTGCCAAATATA CGATAAAAGGAGTAATCGTAGACATATTACCAATTGTTTTTTCTAAACAGAGTCCGAAAGCTTCATTTTATTGGTCCAGCCAAGCCAACCATAAGTTTTT CGAAATTTCGAGTCAAATAGTAATCGGGATATCCCCCACTTCAATAATAAAAATCTTACTGTAATTATGTACCAAAGGAATTTTGTATATAATAAAAATG GGTGTTTAAACTCATTCATAGTTTTATTTATGTAATTGGAGTTGACTTGTTCTTCTACTAAGTTCTTTTGTGCCACAAGCAGACACTTACGGAAATAGAT CTGGCAAAAACAGCTTCTTCAGCTGTGAATCTCCTAGTAGATATTGGGTATTTTCCTGTACACGTCAATCTTGATTTGTTGAAGTTGAGTATTCCCACTG ATCATTCAGCTGAAAACATATCAGTTGCTCAAAGTCTTCTATCAAACTCATATGATCAAGATGAGATCAATAGGAAGAATCTTACTGATTTAAAGGTTTA TGCCATTGATGTTGATGAGGCTGATGAGCTTGATGATGCTCTGAGTGCAAAGAAGTTGCAAGATGGTCGAATTAAAGTTTGGATACATGTTGCAGACCCA ACTAGATATGTTGAAACTGGGAGCATTATGGATAGGGAGGCTATGAGAAGAGGAACTTCTGTTTTCTTGCCCACTGCCACATATCCTATGTTTCCAGAAA AGCTTGCGATGGGGGGTATGAGTTTGCGACAAGGAGAGCTTTGTAATGCTGTTACTGTATCAGTTGTGCTGCATAATGATGGCAGCATTGCAGAATGTTC AGTGGTTAACTCAGTGATTAAGCCAACATATATGCTGACATATGAGAGTGCATCTGAGCTACTGCATTTGAACCTGGAGGAGGAGGGCGAACTCAGAATT TTGTCCGAGGCTGCAAACCTTCGTTTAAATTGGCGCCGTCAACAGGGTGCTGTTGACACAGCAACATTAGATACTCGCATTAAAGTGTCTAATGCAGAGA GTGAAGAGCCATTAATAAATATTTATGTCGAAAACCAGGCAGACCCAGCAATGCGACTGGTCTCTGAAATGATGATACTCTGTGGTGAAGCCATGGCCAC ATTTGGGTCCCATAATGATATTCCTTTACCCTACAGGGGACAGCCCCAGTCACATATTAATGTTTCTGAATTTGCACACCTTCCAGAAGGGCCTGTTAGG AGCTTTGCCCTGGTCAAAGTAATGCGTGCTGCACAACTTGATTTCAGGAAGCCAGCACGCCATGGGGTTTTGGGAATTCCTGGTTATGTTCAATTTACAT CTCCCATCCGTAGATATTTGGATCTTCTGGCTCACTATCAGGTAAAGGCATTCCTTAGGGGTGAGCCTCCACCATTTTCACCCGGCAAGCTTGAAGGAAT AGCAGCAGTAGTAAATATGAAATTTAGAGCAGCGAGGAAGCTCTGCAGCAGTAGTCTTCGATACTGGATATTGGAATATTTACGAAGACAACCAAAAGAG AAAATATATCGAGCATTGGTACTTAGATTTATTAAAGATCGAATTGCAGCTCTATTGTTGGTTGAGGTTGGATTTCAAGCTTCTACCTTGGTCTCTGTTG GAACTCACATAGGGGATGAAATATTAGTTAAGGTCGAAGAAGCACATCCTCGTGATGATATTATTTTTCTGAAGGAGGTCATAAAAGGTTGACTTAAGAG TTAAGAAATGTTTATGAGAAAGGCTTCCAATGTAAAAATTATTCAAAAAGGTAATCAACTTTCTATGCATTCCTCCCAATTCTATATTTTTGTCAACGAC AGCGAACCAAACCGTCCTCACTCAGCTGGGCGGCTAGGATGCTCCCTCATCTTTTGGCATCGAAGAAATATCACGCTTCACCGGAAAAATCTCAACCTTT TAAACTTTGTCAAGCTGTTCAAATTTTGTAGTACCATTCTGGCAGAGAAATTCAGGATAGTTCTAGCCAGCATATCCAACCTTCATCACTCCGGCAGTGT ACAGTCCTTCTCATTGTATCTGATCATACGGCGGCATAAAGTTAGCAGGTTTTCTCCCTCATAAGCGAGCAAGATTTGTCGGTTCCGTTGATTTGGTAAG TATTTCCTTGGCATGAGCTAGTTATAGTAATTTTTCACCTTTTCTACCTGAGAATTCATGGTTAAGATTTTATTTCATTAATTTACTTTCTTGTATATGC CAGGCTTTGCAACTTTACATAAATATGTAATTGAGTTTCATTATTGTAATCTTACACACTTTGTGCCAAAAGATATAAGGATCTGAATTGCAAGTTGCAA TACAGGGTCATATGAAGAGACATTTATAACTATAATTTATTATGAAGAGGATATGAG BLAST
Tissuepods
Gene nameLI_gene_177097; 
Additional informationdetails; 

Expression of Ll_transcript_346458

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_346458
BlastpRibonuclease II, chloroplastic/mitochondrial from Arabidopsis with 75.64% of identity
BlastxRibonuclease II, chloroplastic/mitochondrial from Arabidopsis with 73.66% of identity
Eggnog3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (By similarity)(COG0557)
KeggLink to kegg annotations (AT5G02250)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019464581.1)
PfamRNB domain (PF00773.18)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;