Ll_transcript_346469

• Id Trinity: TRINITY_DN50420_c2_g1_i8
• Name Transcript: Ll_transcript_346469
• Sequence: GTGAGGCATAAGTGATATTCGCGCCTCGGACAAGATTAATCCGAGATAACCCACACACTCTCCCTCCATTTTCCTTCATCCTTATCTCACCACTCTCAAT CCCAATCCATGAATCTCTGAACTTCAATTTCCTCAACCATGCCAATTCGTGCCGTCAATTCCTCCTCCTTCTTCTCTTTCTCCACTCCTCCTCTCCCCTC CGCCCTCCGTTTCTCCCGCTCCGCCGCCTTCCACCTCCACCCCTTCTTCTCCCGATATGCCTCTGCCGGCGCCGCTCCAAGCCGCTCCTTTCAGAGCATC TTCGACAACGTCATGGAAGAGCTCCAAGCCATGCGCAAGCGCAGGAAAAGAATTTCCGCCACTTCTAACACGGGATTGTTGAATGAAGAACTTCTTGAAG ATAGACTTGTCAATCGCTCATTGAAAAAAGGGTTGCTGTTGGAGTTCAAGAAGGATTCTGATAGAGTATTGCTAGCAGTTGCTCAGAGACCTGATGGCAA GAAGAATTGGATGGTTTCTGATCAGAATGGTGTTGCTTCTTCCATCAAGCCACAACAAATAACATATATTGTTCCTGGTATTCACAATTTTGATGAAGCA GATATCACAGATTTTGTTCAGAAAGCTCAAGACAACATGGATCTATCACTACTTGAATTTGCTTGGGTTGAGCTCCTTGAAAAGAATAAGTCCGTGACAG TTGAAGAGTTAGCTGAGATAATTTTTGGCAGTGCTGAGCCTCTTGATAGCTATTGTGCTCATCTCTTGCTGTCAAAAGATGAAATATATTTCACTGTGCT TGAGACTAAAGGACCTCGTTCCATTTATGGACCTCGACCAAGTGAGCAGGTTGAGGAGCTCATTCGGAGGAAGCTTGCAAAGGAAGCTGCTGAGAAAGAA TTTAATGAGTTTATTGAATTGCTGGCTTCCGCAAAATCAATGCCTTTACAAGATAAACCTCCTAAATCCTCCTGGATGGATGAGGAGAAAATTCGGAGTA GAATTGAGGCACTTGAAGCATATGCTCTTGATGCATGTACAAGTGATGAACAAAGGAAAACAGCCGGGATGATATTTAAGGAAATGGGTCTGGCAAAAAC AGCATCTTCAGCTGTGAATCTCTTGGTAGATATTGGGTATTTTCCTGTACATGTCAATCTTGATTTATTGAAGTTGGGTATTCCCACTGATCATTCAGAA GAAATCATATCAGTTGCTCAAAGTCTTCTATCAAACTCATATGATCAAGATGAGATCAATAGGAAGGATCTTACTCATCTAAAGGTTTATGCCATTGATG TGGATGAGGCTGATGAGCTTGATGATGCTCTGAGTGCAACAAAGTTGCAAGATGGCCGAGTTAAAGTTTGGATACATGTTGCAGACCCAACTAGATATGT TGAACCGGGGAGCATTGTGGACAGGGAGGCTATGAGAAGAGCAACTTCTGTTTTCTTGCCCACTGCCACATATCCTATGTTTCCAGAAAAACTTGCCATG GGGGGTATGAGTTTGCGTCAAGGAGAGCTTTGTAATGCCATTACTGTATCAGTTGTACTACATGATGATGGCAGCATTGCAGAATGTTCAGTGGTTAACT CAGTGATTAAGCCAACATATATGCTGACATATGAGAGTGCATCTGAACTACTCCATTTGAACCTTGAGGAGGAGGTCGAACTCAAAATTTTGTCCGAGGC TGCAAACCTTCGTTTAAATTGGCGCCGTCAACAGGGTGCTGTTGACACAGCAACATTAGAAACTCGTGTTAAAGTGTCTAATCCAGAGAGTCCAGAGCCA TCAATAAATATTTATGTCGAAAACCAGGCAGACCCTGCAATGCGACTCGTCTCTGAGATGATGGTATTGTGTGGTGAAGCCATTGCCACATTTGGGTCCC GGAATGACATTCCTTTACCCTACAGGGGACAGCCCCAATCAGATATTAATGTTTCTGAATTTGCACACCTTCCAGAAGGGCCTGTCAGGAGCTTTGCTCT GATCAAATTAATGCGTGCTGCAGAAATCGATTTCAGGAAGCCAGCACGCCATGGGGTTTTGGGAATTCCTGGTTATGTTCAATTTACATCTCCCATCCGC AGATATTTGGATCTTCTTGCTCATTATCAGGTCAGCTGTTTCCAATTCTATCATTCACAGGTATAATATAGATTGCATATGGTGATGCTTGCTAGATACG TGCTATTAAGTTTTGATTTATGAAATCGACAAAAATCAGTGAAGCTGAAAAGAAGCAAGAGACCAAGATAATGCAGAAAATGCCACTCTGGGTTCTTGAA TTGTCTACTTGTGCTGGATAGAATATAACTATACAAATCACAAAATATAGCTGTTATTATTCACGTTTTTATAGAACTCCCATGTTGTGTTTGGATGTAA TTTAATTTCTATTTTTTTAATAAAAAAAAATCATCTCATTTATGGTGAAACATCAAATCCAGGTCAGAATTTTTTGATGAATACTTGGGATTCCGTGAAT AATCAGTTTGAAATTTTGGACAAGCCTCATATCTTGAGAGCTACCAGAACTAAATCTGTTGGACCCAGCGCTCACCAGTCCACCATGGAAAACCCAGTTA CAAACCTCAAGCACAAAGATTTAGAAACAGCCTGCTCATATGTTTATTATTGCTCCATTTAAGTTTCAGTTTATGGTTACCAAAGGGGGTAAGGAAATGG AGACAGAGTTCATGGGAATGAATGTAGTAGGACTTCGGATTCCTACCAATTTGGTGGGATTTTAAATTCTTCCTTAAACCATAAAGTACTTTCTAAAAAT TCCAAAATGATTGAGGCATTTTAATCATCCAAATAGTGCATCCTATAATAAGACTTTTTTTTTTGTATAACCGAGGGTATTCCCTCATCTTATGGGTAAA GAACTAATCCCTTTCGGGGTGCATGACTGTCCCTTCCAATAAGTTTCGCTTCCAGGAATCGAACTCTTGACCTTTTGGTCTATTAGAGGATCCAGTGAGG TATTACACCACTAGACCAACATTTTGTTGGTATGAAAAGACATTTTAAATCTTAATAAAATACTTTGCTTTCTTAAAATTCAACAGTGCATCCTATAATT GATGTCATGTGACAGTAAATGGATTATTTAATACACAAGTACAGCCTCGAAGACATGATTCTATAGCTTTAGTAAATCTTAGTTTAGTATGGTCATCATA CCATCCTGAGTTTAACATAATGATTGAATGTGGAACATGTTATGGTAGTAATGTTTAAGTTGCGGGGCTTTATTCCCTAACCACCTTTGTAAGAATTATT TTTAAGTCTAATTCATATTGGTATTTATATGAATCGTGGTCTTTTTTCTAAGGTTTTTAAATCTCTGTTTTCTAGATAAAGGCATTCCTTAGAGGGGAGC ACCCACCCTTTTCATCTGGTAAGCTTGAAGGGATTGGAGCAGTTGTAAATGAGAAATTTAGAGCAGTGAGGAAGCTCTGCAGCAGTAGTCTTCGATACTG GATATTGGAATATTTACGACGACAACCAAAAGAGAGAAGATATCGAGCATTGGTTCTTAGATTTGTTAAAGATCGAATTGCGGCTCTGTTGTTGGTTGAG GTCGGATTTCAAGCTTCTGCCTGGGTCTCTATTGGAACTCAGATAGGGGATGAAGTATTAGTTAAGGTGGAAGAAGCAGATCCTCGTGATGATATAATTT GTGTGAAGGAGGTCATAAAAAGTTGACTCAAGAGTTAAAGTAAGAAATGTTTTTGAGAAAACTTCCAATGTAAAATTTATTCAAGAAGGTAAAAAATCTT TCTATACATTTGTGCCTCATTCACTTTCCTATACACAACTTGTCTGCTAGGATGCACCCTTCATGCTTCACTGAAAAAATCTCAACCTTTTGAAGTCTCA TACTGGCTGAGAAATTCAGAGAAGTTCTAGCCACAGCATATCCAGCCTTCATCATTCCGGCAGCGCAAATCCATCCCACCGTCTCCGATCAGACAATGAC ATAAAGTTAGCAGGTTTTCTCCTCCCTCTGCGAATAGCTTTACTCCGTTTGTTGATTTCGAAACGAATAATTGTCGAGTATTGAAACGTCGAGGTGTGTT AAGTGTTAAAGTTCCATACTAGTTAAAGAACCATTCATAATGACCTGGGCAATGTTTCCTACAAGCTAGCACCTTCAGTAGAGTTTTACTAAGTTATGCT AATTCTCATAAGCACAATAACAAAGTTTTACTGTCATTTTATCAACTTCTTGAAGATTTGCTTGTGCAGCTAAAATATATGTGATACAGATATTTCCACA AGGTAATAAGAAAACATGAGAAGTATTATAAGTTTATTTCCATTCAGAAAGAAAAAATATATTTTAAGTGTCTGTTTGTGAATTGAATTTTAGTGGGGAA GAAAAGGAAATGGAAAACTTCGG
• Tissue: pods
• Gene name: LI_gene_177097;
• Additional information: details;

Expression of Ll_transcript_346469

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0
• PS2: 0.1
• PS3: 0
• PW1: 0.1
• PW2: 0.4
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346469

• Blastp: Ribonuclease II, chloroplastic/mitochondrial from Arabidopsis with 66.57% of identity
• Blastx: Ribonuclease II, chloroplastic/mitochondrial from Arabidopsis with 66.57% of identity
• Eggnog: 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (By similarity)(COG0557)
• Kegg: Link to kegg annotations (AT5G02250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448578.1)
• Pfam: RNB domain (PF00773.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;