Ll_transcript_346495

• Id Trinity: TRINITY_DN50420_c2_g9_i1
• Name Transcript: Ll_transcript_346495
• Sequence: GCAGCTCTATTGTTGGTTGAGGTAAGCAGCTAATGAACCTATTATATGATCTGTTTTGAAGTTGCATGTCATTTGTTGATTGTGTCAGTGGGAAATGCAA GCATTGTATTAAACTTCTAGATGGGCTAGCTGCCTTAAAAGAGTTGCATCTCTTTGGGATGACATAATTTTTGAGATGAATAGTGAAAGTGTGAAACATG ATGAAAGGAGCCTTAGTACAATGCCTAAAGTTGTTGTAGTGGCCCATATGATTAGGATGTCATAGCTTCCAATTTGGAACCTGTCTCTTGCAAACGCGAG GTAAGGTTGCTAACTATAGACCCAAACAGAGGGTTCGACCGTACATGTTGAGGGATCTTTCTCGCACTATATCACCCTTTTTAATAAGGAAATGTAATTT CTAAATGTTATTTAATATGGGAGGAAATAGCCTTTCTCACCTCCAGGTGCAATATTTTAATCTCTATACTTTTTTTAAAAGAGAAGAATGTATATAGATA GATGAGAACGATATAAAAGCAAGAGGATAAGGAATCCTGAAGATTTGTAGAATAAACTACATAAAAAATAGACAAAAAACATGCAGCAAAGCATGTCAAT CTCTCTGCAAATCTGAAAGGACACCTCTCTAAGAAGGCCATGGGCAAAACAGCACAAAGAAGCTAGAAAAACTATTCTATCCAAAATGAACTCGAGGCAC CCTGTCCCCTGAAAAGATTCTCGCATTTTGTTCTGTTAGTATTGTGCAGGCTAAGCTAGTTCATAAAGTGTGGGATGCCTAAGCCTTATAAGCATTGGCT TGGTCATTTTCTCGTCAGATATGAGATATCCTAACACCCCCTCATGCTTAGGACTTAACATCAAGAGCGTGAAGTTTGCAAGAGTTAACATTTGTGGGTG ACCAATATTTGGAGGGTCCAACTCTGATGCCAACTTAGAAGTGTGCAGACTAAGCCTAACTCAGCCCAAAAACTAGCTCATGGGGTGAGGCATGCCTAAG CCTTATAAGCTCTGGCTTGGCCACGTTCTCATTCTTTGTGGCACTATCTTAACACGTTCTAACCAAATGCTCTAACATAACTTTAAGAAAGCACATTGCC AAAGTTTTTTAGCTTCCTGCTAGAGCCAACCTGCTGAAATTTGATACTTAGGATCATCTTTAAATCCATGAGGCGAACACAATGTTCATAAAAGACACCA AACACCTTATTTTGTAGACAGGAAGCTGCTAAACAATGCGAAAACAAATGAGAAACACTTCATGAACTAGATTTGTCTGTCAAGCACAACTATTAAGCAG ACACCTCTAGTTATTCAGGTGTCCGGTTGTCAGACAAATTTATGACACCGACATTCCTCCGGATTTGTTAGACACCCCTCTCCTGGTGTCCAGTTAATTT TTTTGTTGTTGGCTCAGACACCTGACGGGCTCGGCTTTAACACTTGGATGGCACCCCAAAATAGCTAAACACCTTCAAGGAAAGGCAGTTTAGAAAATTC CCAACTTTTTTTGAGTTAATATACAAAAAGTACTCAATGAACATGAGTTGGAGGTTGTAGTGTAAGTAGTCAATAGCACACTATCGTGCTGGGATAGCGA CATTGCAGTGGTTGTCGGCCCTTCCATGCAACGAATGGGCATGTAGCAGTGCGGGTCAAATCGTGGGTGAGTACTATTTTTGTTTCAGAAGAGACAAACT TCTTACATTTAAAATGATGTCTCTTGGTATTTTTTCGAGTCTCATTATACTGAATTCAATTTAGATCTTGAAAAGGTTGACATTATCAAAACAGTACAGT AATTAAAATGATATAATATTCTCATCTTTCTTGTTTTACATGGCTATGTTTAGATCCTCCCCTGAGGTAATGCTTTTACTAGTGTTTTCACTACATGTTT AATGCGGTTAAAAACGCGCAACTTTGATACCTGGCTGATTCTCGTTTGCAGGTCGGATTTCAAGCTTCTGCCTGGGTCTCTATTGGAACTCAGATAGGGG ATGAAGTATTAGTTAAGGTGGAAGAAGCAGATCCTCGTGATGATATAATTTGTGTGAAGGAGGTCATAAAAAGTTGACTCAAGAGTTAAAG
• Tissue: pods
• Gene name: LI_gene_177105;
• Additional information: -

Expression of Ll_transcript_346495

FPKM

• PAB: 0.4
• PNAB: 0.4
• PS1: 0.4
• PS2: 0.2
• PS3: 0.1
• PW1: 0.2
• PW2: 0.4
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346495

• Blastp: -
• Blastx: Ribonuclease II, chloroplastic/mitochondrial from Arabidopsis with 68.29% of identity
• Eggnog: 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (By similarity)(COG0557)
• Kegg: Link to kegg annotations (AT5G02250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448578.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;