Ll_transcript_346255

• Id Trinity: TRINITY_DN50422_c3_g1_i5
• Name Transcript: Ll_transcript_346255
• Sequence: CGGGGGGAACGTGAAGATATAACATCATTGGTAGAATGAATATAAGTGCAGAAGAATTGTAGTTGCTTCATCCTCCCAAACTCTATCTTCACTGTCTCTG CCTCTTCTTTTTGCTGAAGATTTTATCAGTAGCTCAGAGCCTTGTATTCCCAGTTCAATCCTCTTATAGAATATAACTGAAAATTTGAGGCCAGAAGTTA TATTAAGAAGCAAACAGAAGAAGGGAAAAGTCACAAGAAATTCAAAGGAAGATGGGTTTTTTGAATCTACTGGAGGTGGCTTCTATGCCAATTATTCAAG TCCTACTTATAAGTGCATTGGGAGCTTTCATGTCAACTCGTTATTTTGATCATCTTCTTTCACCAGATTTTCGGAAATCCTTGAACAAGGTTGTTTTCAT TACATTCACTCCTTCACTTGTATTTGCCAGTTTTGCAAAGTCTGTTTCACTTGATGATATGATATCATGGTGGTTTATGCCAGTTAATGTTGGACTTACC TTCTTAATTGGAGGGATTCTAGGATGGATACTAGTAAAATTACTAAAGCCTAACTTGAAGTTGGAAGGCCTTATAATTGCATCATGTTCAGCAGGAAATA TGGGTAACCTTCCTATAGTAATTGTCCCAGCTATCTGTGATGAGAAAGGAGGCCCATTTGGTAGAAGTGATGTTTGCCATAGCAATGCACTCTCTTATGC ATCCTTCTCTATGGCGCTTGGAGGCATTTTCATCTGGACTCATACTTACCAGACAATAAAAAGTAAATCTTTGCGATATAAGGCACTTGAGGCTGCTGAG ATTGTAAAGATTCCCAACAAAGATCTTGATGCTAATGCAGATACTCTCCTTCTCAGGGAAGAAGACGATGAAAACACAGTATTAGAAGTCCCCACGTCAG ATTATATTGGAGACACTGAAAACCAAAGTATTGAAGAACAAGATCAGTCCAGTGTATCGAAGAACGGGAAAGAATCCTCTTGGTATAGAGCGATAGAAGT TCTGAGAAATTTTGTGGCAGAACTACTTTCACCCCCAGCAATTGCTACTTTTTTCGGCTTCTTGTTTGGTACGGTTTCATGGCTAAGGAACCTAATAGTA GGAGAGGATGCTCCATTCGCAGTTATCCAAGACACTCTTGTATTACTAGGGTATGTGACTTTGCTCAAAGAATCTAACTTTTCTCCTTTTTTCTATTTCT TTTCTAACTATTAGCTCATGATATCATGATGTAATACTAACCTCACAGCTATCTGATTATTGAACTTATTGCTTTTTTTGCAGGAATGGGACAATTCCTT GCATCACCCTTTTACTTGGTGGTAACCTTGCTCAAGGTATAGCTGCCGAAGATATCTTCAACATAGTTTACAATTTCAGGACTGAACCACTAGTTTTGTT AACCTTGTCTTCAAATTGCAGGATTGAAATCATCAAGTGTCAAACCATTGACCCTCATCAGCATCACCATAACTAGACTTTTCATACTACCTGTTATTGG ATTATTCATTGTTAAAGCTGCAGCAAAATTAGGCTTCCTCCCATTGGATCCTTTGTTTCAGTATGTGCTGGTGATGCAGTATGCCATGCCACCAGCAATG AATATTAGTATCATGACTCAGCTGTTTGATGTAGGTACTGAGGAGTGTTCAGTTATCCTGTTGTGGACATATGTTTCTGCAGCCATAACATTGACTGCTT GGTCAACATTCCTCATATCAGTCTTATGATCTTATAATAAGGTGTCTTTAGCTCCTTATTTTTATGCATAAGAATATTGTCCAATCAAGATCACAGTCTA TACAGAACCATGGATAGTGGTTGTGTGACTGAGAACATTTATACAGTAGATTTCTTTCAACAACTTTGTTTCACTCTATAGGTTACATAAAGATAAAAGA ATGGCTACTTAAGATTTTTTAGTTATTTTTTTGTATTGCTTGCCCTGTATTAGTCTTTTTTTATTGTATAGGGAAAATTAGAATTAGGTATTGAAAGCTA TTGTGATTTGTATGTGATCCTCACTTGGAAAAAAACAAATGGTTCACATTTTTTATTCGTTATTTTGTTCTTTTTGATTATTTCTATATACTTCTTTTTT CAGTTCAATTCTTTCTACACTTTGAAGATGCAAATATCATAAAATTTGCATGTTTACTACTAATTTGAAAGTTCC
• Tissue: pods
• Gene name: LI_gene_177118;
• Additional information: details;

Expression of Ll_transcript_346255

FPKM

• PAB: 15.6
• PNAB: 0.6
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.6
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346255

• Blastp: Protein PIN-LIKES 7 from Arabidopsis with 53.29% of identity
• Blastx: Protein PIN-LIKES 7 from Arabidopsis with 53.29% of identity
• Eggnog: Auxin Efflux Carrier(COG0679)
• Kegg: Link to kegg annotations (AT5G65980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422406.1)
• Pfam: Membrane transport protein (PF03547.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;