Id Trinity | TRINITY_DN50424_c2_g2_i4 |
---|---|
Name Transcript | Ll_transcript_344275 |
Sequence | GTTATTTTAAGTTATTTTGTCAACAAAGTTATAAATGTTTCATGTATTAATAGAATGCAAGTCATAGATTAATAACATTGTCGGTGGGTTGATGGAATTT TTGATTGGCTAGGCAAGCAAAGCCAAGGTTGTCACTTTTTCTCACCAACTCTCTCTCTCTCTCTCTCTGTCTCACTCTGCATCCAAAACCAAAGCTTATC CCCCACTTGTTGCTACCTCAGCCATATCTTCCTTCATATATACCCAACAACCCATGTAACAGATTCTGTGTATGTGTCACTCAAAAAACTGAAACTCAAA CACCATCATCATCAACAACACCATATATCAAAGTTGATCAGAAGAAGATAAGATGATGAACGGTGATGATGCTATTGCTATTGAGACTCAATACATAAAA AGGCATCACAAGCATGACCCTAGAGACAATCAGTGCACTTCTGCACTTGTCAAACACATCAAAGCCCCTGTTCATCTTGTTAGTTTTCATTTTGTTTCTC ATCAACTTCTTCATGTTTGTTTTTTCATAAATTATGTCTCTTTGACTTTTGGGTCTGATTAAAAATTGATTTTTTCTCACTCCTTTTAAGATCTGAGCGA CTTTGGTTACTTCTAAAGGCTATTTCTCAATCTGGGTATGTGAGTTATGTCATTTCCCTTGATGGGTGTCTCTTGGGGTTGGATGCTTCTTCTTAATTTT GGTTTCTTTTTTGTGTCTTGGAAAAGATGAGATTTTGAGTTCATGAGATGCATATTTTGATTGGTTCACGGTTATGATTACGAAATTTGTACATGGGGAA GGGTGGTCTAAGTCTTCATTTGTTAGGAGATTCATAGGAATTTTCGTGTCACTTCCAATTTCATAAGATGAAACATGTCATAGCATGTTTTTTTATGGAT TTGTTTTTCATGTTTTGTGTTTCAACTCAACCCTTCGGGTCAATGTTAAGTGTGCAATCAATTAAGAAAGAAATCTGAAAATTTTAAGGCTTTATTTGGA TGCATATTGTTTAGCAGCTGACAAGAGTGTTACACTTATTTTGTGTTCTACAGATGAGATTTGTTTTCAGCAATCCAAGCACTACAGAACATTCTTACTT TTTCTTTTTCTGAACTGTCTTATGCTTTGTCTCTAGGACACTCAAATGGAGGTTCAATGTCATCAAATTGAATAAATAAGTTTATGTGATGACATGTTTC TTTATATTATGAACTTCGTGTCCAAAGAGCGTAAAGGATTTGATTATCCATTGGTCTCATTAGTTTATTTATCTATTTCAGGTGTGGTCTCTGGTTAGAA GATTTGATCAACCCCAAAAATACAAACCATTTGTTAGCAGGTGTATCATGCAAGGGGACCTTGGTATTGGGAGTGTTAGAGAAGTGAATGTTAAATCTGG TCTTCCAGCCACAACCAGTACTGAGAGGTTGGAACAACTTGATGATGAGGAACACATTCTTGGCATCAAGATTGTCGGAGGCGACCATAGGCTGAGGGTA TGGTGCTTTCTTCGTCTCTATTTGGGATATATTAAATGTCCGTATCTAGTTGAGTTATTAGCTGAGAATATTCTTCCACTTACAAACAGAGAAATTGTGT TGTCTAATAATTTTTTTTGGTAATCTCGAATTTGTTTTGAAATGATAGCTTAATAGGTATATTGAGGATGTGAAGAAATAAATGTTAGACATTGACCACA CTATCACTTGCCTGCTTCTGTTGATTAATTGGTATACTTTCAGGGATCTTCGTCTTTTCTATAATTATGCCTTTGGTCTGCCTTCGTCTTCATGTATATC ACCATAGGGGAATACATTGAATGGACTGTAGACTACAGAGTCTCCTATTTGGCATCGATTTTTGCTGTGTTGGTTTTGCAATTCATATAGTACTTACACC GTAGTTGGTTGATTAACTTAATGTGCATTGTGTGTTGCATCATTTCTGACCTATGACAATGAACCTCCCTCATTTCTTACATTCATGTTCATAGTTCTAC AGTGTCATCTCCAGTATCCTAGTGTTAGATTATATCGTTATATCACTAATTTAAACATGTGGCATTGGCAAGAGCTGAAAAAAGTTGGTTGAAGCTTGGA TAGTTACATTTATAGAAAAGGTTAGAAGATTGTTTTTAGTGACACTTACACATATGTTCAGGGTTACGTGCTATAGAAGAAGCACTCTTGGATTCACAGA TTACCATGCATTGATATGTGTGTAAACTTTACTGAGATGCACTTGGTATAGGCTAAATATGAGATTGTTAATTCATTTCTTATGCCGTTACACTGGCATT TTAAAAGTTTTATTTGCTAGCTCTATTGTCATGCTAATTTGATCATGTCACACGGAACTTGTAGAACTATTCTTCCACAATCACTGTCCACCCAGAGGTC ATTGATGGTAGACCTGGTACAATGGTGATTGAATCATTTGTGGTGGATGTGCCAGATGGGAACACCAGGGATGAAACTTGTTACTTTGTGGAGGCTTTAA TCAGGTGCAACCTAAGCTCTTTGGCTGATGTTTCAGAAAGGATGGCCGTGCAGGGTCGAACCGATCCACTTAACCTTTAAGTTCGTAGGTTCATACAATT ATATGATCCGTGGTGTTTTGGTCACAGTTTGGTGGAGATTGGTTGGAGCATCCCTTCCAAAAAATGCAGAAGTTTTGGATGTTATCTTTCTCTGTATCAA GGATACCTTTCCCCTATCATCCTCTCATGCAATTCCTTTTCCTCTTCTGAACAGCAAAGTTTCTCTTATTTAGTTTTTGCAAAGATGAGATTCTTCTGGG CTTCATGTGCATCTGATGATGGGAGGGGAAAGTTTTTTTTTTCTCTGCTATATATTCTTCCTTAGTTTTTGTTGTTGGTGATGTGTTACTAAAGTTATTT GTAAATATTTTTGTTGGAAAAAAACAACTGCAGCAGTCTTTTACATGTCATGTTTAGTAGCAAGATTAATTATGTGGTTGCAGGAGAAGGGCCCCTAATA GTGGGTACTTAGTAGCTACTTTTGTATGTGTAGTGTAGCTTCTTTTGTAAGTTATATATTGCACAATTTCCTTGCCATGGGCTATATTTTATAACACTCA TTCAAATAGACATGCTTTTGGCCCCTTCTAGGACAATGATCTGTTGTCCAAAACTGTGTCCTACACCAATAAAAATATATG BLAST |
Tissue | pods |
Gene name | LI_gene_177133; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344275
Blastp | - |
---|---|
Blastx | Abscisic acid receptor PYL7 from Arabidopsis with 84.72% of identity |
Eggnog | Polyketide cyclase / dehydrase and lipid transport(ENOG41108V9) |
Kegg | Link to kegg annotations (AT4G01026) |
CantataDB | Link to cantataDB annotations (CNT0000974) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455529.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |