Id Trinity | TRINITY_DN50426_c0_g1_i1 |
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Name Transcript | Ll_transcript_347023 |
Sequence | GCCAATGCTCTTATGAATCTCACGGGAAGGTTTTATTCAGCCACCATTGTTGGCCCTCCTTTTATTCGTGTTGGAGCCTTGGGCTTTATCTGATGAAATG CATTTTGACCAGGCAGGAGATACACATATGTAATAAAATTACTGCTCCATGGAACAATTTTTCTTCTGAAACTTCAATCATTTATGCACTCGTTGCTTGA TGCTCCCAGCCACCTTCCCCAAACAGTGACTTCTCTTATTGTCATCAAACTTCTAACTTAATAATCTCCCCAGGTCGACCCATCATTGTCGACTTCTCTC CTGTCACGGATTTTCGAGAAGCTACTTGTAGACAGTATGAAGAAAATGTATGTAATCGAGGTGGCTACTGCAACTTTATGCATCTCAAAAAGATAAGCAG AGAATTGAGAAAGCAATTATTTGGAAGAAGCAAGCGATGGAATGACCGTGGTGGAAGCAGAAGTCGGAGCCCTCCAAGGAGTCGTGCCTATGAGGAACAT TCACATTCTGGTCGTGGTTCTGGTAGAAGAGATTTTGACAGGTATCATGACAGTCGTGATAGGAGGCCTAGAAGCCGTAGTCCTCGACGTAGAGAAAAAC GAAGTCGTAGTCCCGTGGACAGGAATGCAAGACGAACCAGAGAAAGTAGTGCAGAAAGGAGAGCCAAAATAGAGCAATGGAACAGGGAGAAGGAACTACA AGACTCTGGTAACAAAAATAATACAAATAGCAATGACCACGATGAACAGGGTGCTGCACAAAATGGTATTGAATCTGGTAACCATTAGATATTGCAGCAC CGTGATAGTGATATGGTCCAAAATGAAGAGAAAAAAACATTTAGTAAGTTTGGCAAGTAACCTGATTTGTCTTGTTTGCACCTATTGTGTTTGTTTTAGT TGTTAGTGTTTTATTATCCTATTCTGAATTACCTATTTAGTTATAGAACTTTGTAATGTCCACCAATAACAGTTTAATTTTCCCAAGTGTAATGTTCCTG CACCTTGAAGGGAGATTTAAAGAAAAAGATGGAAGGGGCTGGGAAGTTTTAAAAATATGACCTATTTGCTATGAGTGATAAAATGTTAATTCTATGAAGT TCAATTATGGGTGTCTCTTAATGGATCAGTTTTGATGGTACAGTTGCCATTTGACTATATCCACATATTTTTGGAGGAG BLAST |
Tissue | pods |
Gene name | LI_gene_177141; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_347023
Blastp | Splicing factor U2af small subunit B from Arabidopsis with 41.74% of identity |
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Blastx | Splicing factor U2af small subunit B from Arabidopsis with 88.24% of identity |
Eggnog | auxiliary factor(ENOG410Z5PX) |
Kegg | Link to kegg annotations (AT5G42820) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425541.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |