Ll_transcript_347038

Id TrinityTRINITY_DN50426_c0_g1_i14
Name TranscriptLl_transcript_347038
SequenceATTTTGACATATGTTTGATTTCTCTACTTTCTATCTATGAGTTTTCATTTTAAAATATATTATAAAAATAAAATTAAGACACATGTTAACTAATGAATGA ATTTAAGGAAGGAGATACTTTATTCCCTAACTTTTATGTATTTGAACAAGAGAATTAGGGTGGATTCGAGAATGTTGGGTTGGGTGAGTAGATATGTTGG AGTTAGACAACATAAGATTAGGAATGGATGTGTTTAGGAGAAAATCGGGTACGTGGTTCGTCACTTTCTGATTTTATTTAAGATGAATCTGTTATGTGAT ATGCACTGTATGTGGTATTCGTGATTAATGAGGGAATGTGGTAACTAATAGTGTAACATTTATTGTAGAAAAAAATGGGAGAATTTTGTAGTAGGTTGTT CGGGCATGTGTGGAAAAACTTTAGAAACCTTGTTAAAAAGAGTAGATTTTTAGAGAGAGGGTAGCGCCGATAATTAGAGGTAGAGGGAGACTAAGAAAAA ACATGACTTTGTTTGATTGATGTAGTCAACCTTGTGTAGTGGGGAGATACTTTGTCGTTGTTATTGTTCGATCATTGAACTTCGACGTTGTTTGGTTGTC TTTGCTCAGGTTGGCAATGTGTATGTTCAGTTTAAAGAGGAAGACCATGCTGCCAATGCTCTTATGAATCTCACTGGAAGATTTTACTCAGGTGCTCATT ACTCCTCATTTATACTTAAGGGTTGTTATATTGTGAAGTATGTTTTTAATTCATCTTCAAGGAACCATTTTCTTTTATTTTGAGTTCAGGATTTCATGGG CTACTGTCCATCATTATTCATGGGTTTGGATATGTTTCTAGTTGTTGTTGCTTGAAATATGAGTTATTGCAACTGTAAACTAATTGCTCGGCTCTTTATA AATAAGAGAAATACCCAAATTCATTCCAGAGCACACACACCTCTCAATTTAGTTCCTGGAAATGTTCCCTAAAAATCTCAATTGTCAGTCAAATTAGTCC TTTTCCGGGTGAACTGTTCTCACAAACCAAATAGAGGTTTTTCATTTGTCAAGAACTAAATCGGGTGGCACATTTCTTCGGACGAGTGAACTTAGATATT TACTCTAGTAGCAATAATACTGATAAGAGAGCCTTTTTTCAATAAAGATTATTCTCTTTTCTCTCCTTTTGTGTATGCAAAGTTAATATTCATATTGGTT TCAGGTCAATAGGTTGGAGATATTATGCCCAACTGGTTTGGCTTGAACTCCTTATGTTTACCTTACTGTAGCCACCATTGTTCGCCCTTCTTTTATTCGT GTTGGAGTTTTGGACTTTATCTGATGAAATGCATTTTGACCAGGTACCTTGTGATCTGTCACATGGTAGCTTCTTTTACCATGCACTCTATCTTTCTAAT GTCTAACCCTGTCTTTGCTGGTTTTGAATAGAATTTTATATTTAATTCGGATAGAGTTGGGATCCTACCAATCTTGATATGTAGGTGCCCATGGCAATGA GTTTAACTTTAATTACCATTACTACCGAATATGGTTTTGTTTGGTATGAGTCTCTTTTATAATTCATATTTTACACAATGCTTAATGATTGCTTTATTTT AGGCAGGACATAAATATATGTTAGAAAATGAATGCTTCATGGATCAATTTTATATGGTGCTCCCAACTCCCTTCCCCAACTTATGACATCTGTTATTGTG ATCATACTTCTAACTTAAGAGTCCCTCCAGGTCAACCAATCATTGTTGATTTCTCTCCTGTTACCGATTTTCGAGAAGCTACTTGTAGGCAGTATGAGGA AAATGTATGCAACCGAGGTGGCTACTGCAACTTTATGCACCTAAAGAAGATTAGCAGGGAATTGAGAAAGGAATTATTTGGGAGAAACAAGCGATGGAAT GACCGTGGTGGAAGCAGAAGTCGGAGTCCTCCAAGGAGTCATGCCTATGAGGAACATTCGCATTCTGGTCGTGGTTCTGGTAGAAGAGATGTTGACAGGT ATCATGGCAGTCGTGATAGGAGGCCTAGAAGCCGTAGTCCTCGACGCAGAGAAAAACGAAGTAGGAGTCCTGTGGACAGGAATACTAGACGGGCCAGAGA GAGTAGTGCAGAAAGAAGAGCTAAAATAGAGCAATGGAACAGGGAGAAGGAACTGGGAGAATCTGGTAACAAGAATAATACCAATAGCAATGATTATGAT GAAGAGGGTGCTGCGCAAAATGGTAGGGAATCTGGTGACCATTAGATATAGCATCATCATCATCATAGAGATTTGGTCCAAAATGGAGGAAAAAAACTTT CCGGTTCATGGCGAGTTGGGTTTTGAAAGGAAAAGGAAAGCTTCAGTATCATGAAATATACATGTGATATGACTCTGTAGCCTTTCATCTCTATTTATGC TTTTCCAAAACTCAACTCGAAACTGAGTCATTCTTTACCCCTATTTAGTTTGGTTTTAGTTATTTGTGTTTTATTATCCTGTTCTGAATTATCTAGTTAT AGAACTTTGTAATATCTACCAATGGCAGTTAAGTTTTCCCCTTAAAGTGTAATGTTCCTGCACCTTGAATGGAGATTTTTTAAAAATTATTTCAGC BLAST
Tissuepods
Gene nameLI_gene_177141; 
Additional informationdetails; 

Expression of Ll_transcript_347038

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_347038
BlastpSplicing factor U2af small subunit B from Arabidopsis with 51.92% of identity
BlastxSplicing factor U2af small subunit B from Arabidopsis with 86.27% of identity
Eggnogauxiliary factor(ENOG410Z5PX)
KeggLink to kegg annotations (AT5G42820)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019444288.1)
PfamZinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;