Ll_transcript_347030

• Id Trinity: TRINITY_DN50426_c0_g1_i6
• Name Transcript: Ll_transcript_347030
• Sequence: CTTGGAAGTAAATACATTTTTGTTCCTAAATGGTAGCATATTGTAATTTAGAGGACAATAATCCAAACCATAAAAAAACATGAAGAGTCTTAATCCGATC ATAAAACAAATGAAACATAAACCCTAACAATCACAAATCGATTTTCCCCAATTCGGATCTTGTCTTTTGTTAATGGCGGAGCACTTGGCATCAATATTCG GAACCGAAAAGGACAGAGTAAACTGTCCCTTCTACTTCAAGATCGGAGCTTGCAGACATGGCGATCGTTGTTCTAGGCTTCATACCAAACCCACTATCAG CCCAACCATTCTTCTCTCGAACATGTATCAGAGACCTGATATGAATGCTCCTATTGTTGATCCTAATCAGTCTCAATCACTTGATCCCGATAAAGTTCAA GATCATTTTGAGGATTTTTATGAGGATTTGTTTGAGGAGTTGAGTAAGTATGGGGAAATTCAGAGTTTGAATATTTGTGATAATCTGGCTGATCATATGG TTGGTAATGTATATGTTCAGTTTAAAGAGGAAGACCATGCTGCAAATGCTGTAATGAATCTCACTGGAAGGTTTTATTCAGGTCGACCCATCATTGTTGA CTTCTCTCCTGTGACGGATTTTCGAGAAGCTACTTGTAGACAGTATGAGGAAAATGTCTGTAATCGTGGTGGCTACTGCAACTTTATGCATCTAAAGAAG ATCAGCAGGGATTTGAGGAAGCGATTATTTGGAAGAAGCAGGCGTTTTCATGACCGCAGTGGAAGCAGAAGTCAAAGCCCTCCACGGAATCGTAAACATG AGGAGCGTTCACATTCTGGTCGTAGTTCTGATAGAAGAGATTATGACAGACATCATGACAACCACAGTGGTCGGGGCAGGTTGCCTAGAAGCCGTAGTCC TCAACGGAGAGGAAGACGAAGTAGGAGTCCAGCAGGAAGGGATAGTAGGTCAGTCAGAGAAAGTAGTGCAGAAAGGAGAGCTAAAATAGAGCAATGGAAC AGGGAGAAGGAACTGGCAGACTCTGGTAACAAGAACAGTAGCAATGGCAATGATTATGAAGAACGAGATGATGCACAAAATGGGAGTGAATCTGGTAGAC ACTAGAATGAGCAGATATAGTTTCTATTGTCACTAGTGACCAAAAAGAAGAAAGACCCTGTACTGTGGCAAGTGATTTGGTTTGTCTAGTTTAAACCTAC TAAGTTGGTTTTTAGCTGCTAGCATCTTATTGTCTTATTCTGAACTTCTGTTGTTTAGTTATACAACATTGTAGTATTTATACCAAGAACAGTTTAACTT TGCGGCTTCAAATGATATATTCCTCCACCATGAAAAGGGAGAAAATAGATCGAGGGGTAGAGAGGAGGAGAAGAAGTGCAGTAAAGTTCCGAAAAAAGTT GATCTTTTTGTGGGGTCAGTGATTAAGTGGAAGAAAGTTCGGTTTTGGTTTGGGTGTTTTACATCTTATAATCAAAGTAGAAGGGATTCAATGGAAAAGA TTGGAAATGGTGCATGTATCTGGATTCTAGACTAGGTATGTGCATATATTTCAGCTGGAGAGTTTTATGATACCTCTATTCTTATCTGTTGAACTTCTAC GAAGTTCGTTTTATTGATAGCTGGTTTATTATTCAATGAATTTTTATTCAAAATCCAATGTTTGAATACACGGGGTTGCATCAACTACTAATAGCTGGAT TATCTGTGCTATTATGTGTAAAATGCTTTTTGGTCTTCTTTATTGGCTTGAGTTTTGGATGAATCATCCAACAACTAAATTTGCATTTGGGACTCCAATC TTGAATACAG
• Tissue: pods
• Gene name: LI_gene_177141;
• Additional information: details;

Expression of Ll_transcript_347030

FPKM

• PAB: 6
• PNAB: 14
• PS1: 12.6
• PS2: 8.9
• PS3: 13.9
• PW1: 10.6
• PW2: 11
• PW3: 9.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_347030

• Blastp: Splicing factor U2af small subunit B from Arabidopsis with 68.33% of identity
• Blastx: Splicing factor U2af small subunit A from Oryza sativa with 77.18% of identity
• Eggnog: auxiliary factor(ENOG410Z5PX)
• Kegg: Link to kegg annotations (AT5G42820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428850.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;