Ll_transcript_345453

• Id Trinity: TRINITY_DN50427_c1_g3_i7
• Name Transcript: Ll_transcript_345453
• Sequence: ATTTATTCAATGTCTTCGAATGTTGTTCAACACATGGTTCCATACATCTGAATCAAACTCACCCATCTTCTTCTGTTGTGAGTTTTCCATCTCTAAATCA ACACAACAAACTCATCCACCCTTACCTCGTGTTGTGTCATATCTGTAATGCGGCGGAGGCGTGAAACTGCTTCAGCAGAAGCATCTAAAGAGTCAAGTAG TGGTGAAGCAATTGATAAGTCTAGTGATGGTGGTGCTAAAGTCTATACCAATGTTCATATCGCAAATCCGAGGAGGTCTTCATTTGTGTGGCTGGCCTTG TTCCTCATTATCACATATTGCTGTACCGCCATTTATAATTACCAATTTCAGAGTATGCCTGTACCCCTTACTGCTGATCAAGCTGGCAAGAGGGGTTTCT CTGAGATCGAAGCGTTCAAGCATGTTAAGGCCTTGACTGAGGTTGGCCCTCATCCTGTTTCTTCTGATGCTCTGAATCTCGCCTTGCAGTATGTTTTGGA AGCCTGCCAAACTATTAATAAAACAGCTCATTGGGAGGTGGATGTTGAAGTGGATCTTTTTCATGCAAAGTCTGGTGCAAATCGTCTGGCCAGTGGCTTA TTTATGGGGAGAACACTTGTTTATTCTGATCTGAGTCACGTCGTAGTAAGAATCTTGCCAAAATATCTATCTGATGCAAAGGAGCATTCCATTCTGGTCT CTTCTCATATTGATACTGTTTTTTCAACAGAAGGCGCTGGAGATTGCAGTTCATGTGTAGGAGTTATGCTGGAACTTGCTCGCGGAGTTTCTCAGTGGGC TCATGGATTGAAGAGAGGTGTTATATTCTTATTTAATACTGGCGAAGAGGAGGGTCTTGATGGTGCTCACAGCTTCATAACACAGCATCCTTGGAGTAAT ACTGTTCGTATGGCAATTGATCTAGAGGCCATGGGCATTGGAGGGAAGTCTAGTATTTTTCAGGCTGGTCCTCATCCATGGGCTATTGAGAAGTTTGCTT TGGTAGCAAAATACCCATCTGGCCAAATTATCTCACAGGACCTTTTTTCTTCAGGAGCCATAAAATCTGCAACAGATTTCCAAGTGTACAAAGAAGTTGC CGGCCTTTCTGGACTTGATTTTGCATATGTAGATAACACTGCTGTATATCATACCAAGAATGACAAATTAGAGCTTTTAAAGGAGGGATCTCTTCAACAT CTGGGGGAAAATATGCTTGCTTTCCTGCTTCACATTGCTGCTGCTTCTGATTTTCCAGAAGGCAACGCGAAAGAAACAGATGAAGATAAGAGCAACAACA ATGCGATATATTTTGACATTTTGGGAACGTATATGGTTGTTTACCGTCAACAATTTGCAAATATGCTCCACACTTCAGTGATATTGCAGTCAATTCTAAT ATGGACAACATCGTTGTTCATGGGTGGTATACCAGCTATAGCTTCATTGGCCTTGTCCTGTTTGGGTATTCTCCTCATGTGGGTGTTTGCCTTAGGTTTC TCCTTCCTTGTTGCCTATCTTCTGCCATTGATATCTTCATCACCAGTGCCTTATGTTTCAAGCCCATGGTTGGTGGTTGGATTATTTGGTGCACCAGCCT TTCTTGGAGCATTGACTGGTCAACATTTCGGTTATCTTCTGCTTCAAAAATATCTTTTGAATGTACACTCGAAGAGAAAGCAACTGCCCCCCACTATTCA AGCAGATGTTGTCAAGTTGGAGGCAGAAAGATGGCTCTATAAAGCTGGATCCTTTCAGTGGCTTATTCTTCTCACTTTGGGAAACTATTTCAAAATTGGG TCTTCTTACTTGGCTCTTGTTTGGTTAATTTCTCCGTCATTTGCATATGGGTTTTTTGAAGCAACGCTGACCCCGACCAGGTTACCAAAGCCACTCAAAC TGGCAACCTTGCTTCTGGGGTTAGCCACACCAATTTTATTTTCTGCTGGCACTTTTATTCGTCTAGCTGCTACAATCATAGGGGGAATGGTTCGACTTGA TAGGAATCCTGGTAGTACTCCTGAATGGCTGGGAAACTTTGTGATTGCTGCATTTATTGCTGCTCTGTTGTCTCTGACCTTGGTGTATCTCCTTTCTTAT GTCCATATTTCAGGTTTTGTTTACTTTATAGCTCTTTTGCAAGCATCATTGAAATAATATCATTTGAGATAATGGGATGACTATTTGCTTGGTTTTTATG GATGCCACTTTTCAAAGATATTTTCCTATCACATAAGATTTGAACTTGTAAACTTTTTAGACCTGGGGTGTGACTGATTTTTTTCTTTTTGGTTGCACTG GGGGAAGTACGGGTAAAGTGTTGGATTTGAATTTGTGCAGAGCCGTGAACTTGTTTTATTACTTTAACTTTGTAGATGGGCTTGATTTAGTGCGGTACAA GTTTCTTAGTTCCTTTCAATTTTATTCTATGCTTTGATTGAGTCTACAAATCAAGTAGATGGGTTTTATTGCTTGTTATTCATTAACTTTCAAGTTTGTA ACTATGCTTAAGTTATTAACTGGTCTATCTAAATGAAGTTCCTCTCCATGTAAAATACAAAGGAATATATACTTTTGAAGCATTAATAATTTAATATTCC ATGTTGTTACTTTTTGTTCAATTGGTTTCAGGTGCGAAAAAGGCTATCGTCCTAGCTACTTTGGTGCTCTTCAGTTTATCACTTGCAATTGTATTATCAG GTGTACTTCCACCATTTTCTGATGACACTGCTAGAGCTGTGAATGTTGTTCACGTCGTGGATGCAACTGGAAGACCCGATGGAAGGTTGGACCCTGTATC ATATGTATCTTTATTTTCAACTACTCCTGGAAAATTGAACAAGGAGGTAGAACAAATTGACAATGGTTTTGCATGTGGTAGAGACAAACCAGTTGATTTT GTAACTTTCTCAGTCAACTATGGTTGCTGGACCTATAATGACACTATAAGTGGCTGGAGTGAATCGGATATTCCTACAATTCATGTTGATAGTGATGCTA AAGAAAATGGAAGAATTACACAAGTTACAATCAATACCAAGGTTTCGGTCCGCTGGGTTCTTGCAATCAATACAGAAGAAATAGAAGATTTCGAGCTTAG AGATGCAGTGAATTCAGAAGAATTAATTCCAGTGGACCAAAAGACTAGTGTGGATGGTTGGCACATTATTCAGTTTTCAGGCGGAAAGAATGCGCCGGCA TTGTTTGATTTGGTTCTTTACTGGAGATCAGGTTCAACTCATAACACTGATACTCCTCTTCTGAAACTTAGGACTGATGTAAACAGAATAACACCAATAA CTCAAAGAATTCTCACAAAGCTTCCAAGTTGGTGTTCTTTGTTTGGCAAGTCTACATCACCTCATACATTGGCTTTCTTGACAAATCTTCCTGTTAATTT TTAGTTACTTCAAATTCAATCATACTCAACTTTATCTTTCATTTCTAGGTGTTATGGCCAAAAATAGGTGACATGTTAAAATCTAGTTATTTGCACTCAA ATTTTTTGTACTACTTTGTTTCCTGCTTCTTCTTTTGTTGTAAAAAGCAATTTGATGATATTGTGGATCAAGATTTGTTTAATGCCTTTTTTTCTACTAA AAAA
• Tissue: pods
• Gene name: LI_gene_177150;
• Additional information: details;

Expression of Ll_transcript_345453

FPKM

• PAB: 0.3
• PNAB: 0.4
• PS1: 0.2
• PS2: 0.7
• PS3: 0.6
• PW1: 0.2
• PW2: 0.8
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345453

• Blastp: Endoplasmic reticulum metallopeptidase 1 from Homo with 30.12% of identity
• Blastx: Endoplasmic reticulum metallopeptidase 1 from Homo with 33.33% of identity
• Eggnog: peptidase m28(COG2234)
• Kegg: Link to kegg annotations (79956)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452698.1)
• Pfam: Peptidase family M28 (PF04389.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;