Id Trinity | TRINITY_DN50431_c0_g2_i3 |
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Name Transcript | Ll_transcript_346175 |
Sequence | TTTATATAAATGGACGAGATAGTTAGTCCATGTGAATATTTCCGGCTTGAAAAGAATTATATCATGCGAGGATATAAAATAAAAAAAAATGTAGACACAA TGTGACATGGAGTAAGTGAAAGGGAAAAGTGACATTTGGGTTGTCTATTTGACATCCACGATCAGCAATACCTCTTTCCACATTTTCTATTGTCACTGCT TCCTTATCCCACTCCTCTCCCTTCTTTCACTTCCTTCACTCTCATTCATTTCCTTCTCTCTGCTCAACATAACACGTCTTTCCCTGAAACCCATCTGGAT ATCAGTTATTTTGAGTGCATAACATCTTCCTGAAGCTCAAAGTGATTCTGAATATCTAAATCCACACAGGAAGAGATCAGCATGTGTTGGTTGGGTCTTT CTGTTGATGTGTTCCGCCAAGTTATACGGTTGAACTTGTATTGTAAAGTCATTCTGTAGATCACCATTCTCATAAATTTCCAGTTTTGTTAGTTTTGGTC CCTCGTTCTAAGCTGCTACCATGGAAACTAGTCTTTGTTTGGTTATTTCTTCTGATAATTAGAAAATTGGATAAAATAGAAGTGAAGGGCGATTCTCTTG TTTTTTGTATTTCCAGTGTGAACCTATCTCATATTGCTCAGTGCTCACCAGTTTTAGCTGATCCTGATTTTATATTTAGCTCGGTGTTTTCATTGTCAAG TTCTATTAGGCATTTCTTTGGTTTGTACAATACATCAGATTGGTTGAATATTGTGGTGAAGATCAAAAGAAGTTATGGTGTACCAAGCAGCAAGTCAAAC AAGATTTCGGGCATTGAAACATTGGAGTGGCGTTAAAGGTGAACCAACAATTATTGTTAGAGTGATAGCATGCTTTCAACCCCTGCACTTTTGTCAGGCT GAGTACTTTCGTCAGTTGCTTAAGCCTATCACGTAGATCAATTCACATTTCTTTGTCATTAAGCTGGAGTTTGTAGTTTCCTTTTTCTTTCCTTTGTTCC TAAGAGAAGCAATAAGTTACTGAATTTCTCATAGAGCACCATCACATTTACTGGTTGTTTATTCTGTTGGATGGTTAAGAGTGATAGCTCTTGGCCTCGC CCACAGCATGTGGCTTGGCAATCATCTTATTTGAATTACTCCAGTATGCTGGCAGAACCCAGCTTACTTGGTCTTCCTGCATATGCAAAGTCTAGCGCTG GCATCTTTCCTGCGGTCGGTGCATTTCCAAGATTTGCAGTTCCTGGTATCCCGAGCCTGAAGACTGAGCTAACAAGTGAGGTGCAGCAAGGGTTCCTTCA GAGTCCCAATCCAGAACCAAGTTTGAAAGAAACCCACACCCGGGGAGCTTTGCAAAATGCAAATCATGCATCTTTGCAAAAGAAGTTACTGATTTTTGAC CACTCTAGTAATATGACAAGATTAGTTTATGGTCCTGGTGTCCCTCTTGTCCAGAGTGCAATTGTTACTCCTATCAAATTTGCTCAAGGTTATGATGTAA ATGAGGAGGGACAGGCTAGAAATAAGGATCAAAAGTTTCTAACCAATTATGGTTTACCAGAAGTGTCTGATAAGGATCACATAGCTCATGAAGAAAGTGA AATGCATGAAGACACAGAAGAAATAAATGCATTGCTTTATTCTGATGATGATGAATATGATGATGATAATGATAATGATGTAGACAACAATGAGGTAATA AGTACAGGGCATTCTCCTTTGGAAACGAAAAGGACACATGTGATGGAAGAACAATTTGAAGACACTAATGAGGATATTGCTAGCTCTGACTGGCCTAACA AAAGGCTCAAGTCAATTGATGGTGGATACAGTATATCATTACCACCCGTCCAGTGTGCTAGTTCGTTAAGACCGAACGAAACGCCTGAGTGTGTCAGTGA TGCTGAATCAAAGCTTTCTAGTGGCTGTGCACATTGTGTTGAGAAAACTGATAATTCAATGGTGGACGATATACAATTGAAAAGGGATAAGATCCGTGAA TCATTGAAAGTTCTTGAGAGCTTAATTCCTGGCGCAAAAGGAAAGGAACCACTATTAGTGATTGATGGAACCATTCAGTACTTAAAATCTTTGATGTCCC AAACTGGTGCTAATGGAGTGAAATATGACTTTCAGGTTGGTTGAAGAGTGCATGAATGACGAAAACATGTAGTTTTTGAAATTCTTAGCTTTGTTGGTTG ATATGTTTAATTTAGCATGCTTGCTTCTTTTTCTTTATCCTCTTTCTTGAGGTGTACATATGGTTTGGAAATAAAGGCACAAATGTTGAAATGGATAGTA CTTCACTTTGCCACTTCAAAAAAATGGCACTCCGGTGGACGAGACTCCCACTTAGCAGGATCTGGGGAGGGTAGCTATACATAGCCTTATCCCCGCAAGC AGAGATGTTGTTTTCAGGATTTGAATCTGTGACCTTATGATCATTAAGTAACAACCTTGTCGTTGTGTCAACCTCAACCTCTTGGAACTTTAGTTGGAGA AAAAATGGGCATTATGGGATTTCAATTTGTTGACCAAAATGATTATATTATAGCTTTAATTGGAGGACTAAAAGTCACAGATTGAACAGATGAAGATGGT AGTGGTGGGATGTGCTGTAAATGGAGATACTTTTTGTTGAAGTGTTGCACTCTGTTGGTGACTGAATGCATGCGCATTAGGTAACTGGGGGTCCCACACT CCACCCTCTTTTTCATTCTTGATATTAAGCTTTTGTCCTCTCTTTCAAGGTTGCACCCATATCATACTGCCATAAAGTCTAAAGTGCCAAGAAAGTTGCT TTATGTTATGGGAGAGTGCTTGATGAGGGAGCCTAATGTTTTATCATGAGTGCATTTGAGATTTCCCATGAAACTGGTTGCTTGGCTGAAGTTCCATAAA ATCTTTCTGTTTCATCCCAAAGTATGCTGGTGGATTGGTTTGATTGTCTAGCAGCTCTGGAGCTGGCTCCACCACTGTATCCAAAGATGGTCCAATTACT GTTGCCAAAGACATTCTCGTAGCTTTGTTGCTCACAACTGCTCTATGTAATACACTTTTGTACTTGCCATTGCTCACAACCTGTTGTGCCCACCAAAAAC ACAAATGGGTAGAGTTTATCACAATCAAAATCTTGTACAGATCCCCTCTCTCAACTTCTATGGTCGGTCACAAGGATAACACTACATGTTACATAAATTC TGAAAATTCTAAAATGATAATTCACACTATTATAAGATATAACATATGACCAGAAACAATTTATCTGCTTGCGAGATAAAGTTGTGTATATCTAGCCTCT CAGATCCTACTAAGTGGGTGCACTAGGTCACCCTTTTTTAGTCAAAGTAGGTGCAACACAATCAACTAATGCAATTATTTATTTAGTAATTAATCATTTT GCTATACGTATATAGCTCATGTTAAGCAGGGTTATGTACCTCAAGGTGATCAGAAACAAGGACCAACAAACAGTTCGGAGTGGAACTGACATTGATCCAC TTGTTATTGTGAAGAACTTGAAGGCCACTAACCCCATTTTGCATGAGGAGGTTTAAGAGACCGTGATCAGAATGAGGGGGCATTCCCATTGCAAGCTCGG GCTGTGGACAAGGTGGATAAAGATTTGCTGTTAAAATTTGCAAACCAGAATCTAGGTTCATTGTTCTGTCTATGTAATGGGGCTCCAATCCTAAGTTTTC TGATATTTCTTTCAGTAGTTCCCTTCCCACTTTCCTTGATCTTCTGCAGTACTCTGCAGATGTATCCCTTAAACAACAAAACAGGTGAAGTTAAACTACA GAGTATTAAGTATCTTTTCCTAATGGTTAGTCCATGCATCCATAAATATAGCACACAAGGCTTCAGAATTGCCTGAAAATGCAAAAGAATGAGGCCCTTC CTTTTGTGAGGTTGGGAAATGAGTCAAATGACACAGGGTGTATGTGCATACCTAACACATTGATACACGTATCTATGTTGAACACTTCAAGGACAATTTC ATACATTTTTTGATACTCTTAGTTGTGTCTTTACAAAAAATAATACTTCTACTGTTCTAGTTTTTGAATTTTTATTGCATCATAATATATGGAAATATTG TAATATCTGTATTCTATTTATCTTTATGAAAATAATGTATCTTCTCA BLAST |
Tissue | pods |
Gene name | LI_gene_177184; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346175
Blastp | Transcription factor bHLH143 from Arabidopsis with 35.64% of identity |
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Blastx | Protein DMR6-LIKE OXYGENASE 1 from Arabidopsis with 41.96% of identity |
Eggnog | Transcription factor(ENOG4111E5S) |
Kegg | Link to kegg annotations (AT5G09460) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445555.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |