Ll_transcript_346414

Id TrinityTRINITY_DN50437_c0_g1_i3
Name TranscriptLl_transcript_346414
SequenceCGGGGAGACTCATAATTCAGAAACAGCATATAGGTTTTGCAGCCGACGGAGAACCGCTTCCACCGTCGCCTCACTCCACTTGTTCCGCCGCCGTCAATAG TCATGGGAAAGAACAGTAATAAATTGAAAGAAAATGGGAAAGAACACTCCAACTTAACCATTTTCGTTTCTAACTTACCTTACTCTTTTTCCAACACTCA GCTTGAGGAAACGTTTAGTGATGTTGGACCTGTCAGGCGTTGCTTTATGGTTACACAAAAGGGGTCTGCTCAGCATCGTGGTTTTGGTTATGTGCAATTT GCTGTTGAGGAAGATGCTATCCGTGCTATTGAGCTGAAGAATGGTTCACCTGTTGGGGGTCGGAAAATTGCAGTGAAGCATGCAATGCCTCGTCCTACTC GTGAGGCACGACAGTCGAAACCAAATCAAGCGGGTAAGACAGATGACCGCACAGAGTCAAAAAATGATGATAAAGATGGCATATCTTCTGAAGCAGATAA ACCTGTTTCAGTTTCAGATAAACCCGTTTCAGTTTCAGATAAACCTATTTCAGTTTCGAAGAAAGAAGAGGTACAAGTGTCAAATAAGCAAAGGATCTCA AAGAAGCCCATGGAAGTAAGAAAAGCAGCTCTCTGCAATGACATACCGGATGAGGGCTCAGAAAAACAGAGGGTTGCTAGAACTGTTATATTTGGTGGTC TCAAGAATTCTGACATGGCTGAACATGTTCACCGCCAAGCCAAAGAGATTGGCACTGTATGTTCTATTAAGTATCCACTTCCAAGGAAAGATCTTGATCA TGGTCTCCTGCAAGATGGCTGTGTTTTGGAGGCTTCTGCTGTACTTTATACAAGTGTAAAATTAGCCCGAGCTGCTGTTGCATCATTACATAAAAAGGAG ATAGGTGGGGGAACTGTTTGGGCACGACAACTGGGTGGGGAGGGATCCAAGACTCAGAAATGGAAGCTTATTGTCAGAAACCTTCCTTTCAAGGCCAAAG AGGATGAAATAAGAGATATATTTGCATCTGCAGGGTATGTGTGGGATGTATTTATCCCACGAAAATCAGACACAGGTGTCTCCAAGGGTTTTGCATTTGT GAAATTCACATGCAAGCAAGATGCGGAAAATGCTATTCAAAAGCTTAATGGATCTACATTCTCAAAACGGCTCATAGCTGTTGACTGGGCTGTTCCGAAA AAGATATTTAATAGTGATGCTAATGCTGCTCTTGCTTCAGAAGAAGGGCAACAAGAGATGAAAGATGAAGATGGTAGTGCTACTGAGAGTGATGGAGAGG ACAGTGATATAGATTCCACTAGTGCTGTGGAAGAGGATGGTGTTCCTTCTGAAATTGATTTTGATAAGGAAGCAGACATTGCAAGGAAGGTTCTTAGCAA CTTGATTACGTCCTCCACCAAAGGAGCATCTGTAGATAATGATTCTGTGTTGAGAGAAAACGAGGAGCCAAAATCCAATGAAATTGTTATGGATGCAGAT AATAAAGCATCTAATGAGTCCGAAAAGGTTGCAGATGTTTCTAGGCCTGAAATCTTCAACAAAAGCAAGTTACCAAATCCCAAGCAAACAGAAGAAGCTG ATTTGCAGAGAACAGTTTTCATAAATAATCTTCCTTTTGATTGTGACAATGAAGAAGTGAAGCAACGTTTTTCTGGATTTGGGGAAGTGGAATACTTTGC GCCGGTTCTCCACCAAGTGACCAAGCGACCAAGAGGAACTGGTTTTCTTAAGTTTAAAACCGTAGAAGCAGCTGATGCTGCAATTTCAGCAGCCGGTACT GCTTCTGGAACGGGTATTCTACTGAAAGGCAGGCCATTAAAGGTTTTGAAGGCTTTGGATAAAAAATCAGCTCATGACAAGGAAGTGGAGAAAGCTAAAA ATGAGATTCAAGACCACCGCAATCTTTACTTGGCAAAGGAGGGACTCATTCTTGAGGGAACACCAGCTGCTGAAGGGGTTTCATCCACTGATATGTTAAA ACGCCAAGAGTTGGAAAGGAAAAAGAAAACAAAGCTTCAATCACCAAATTTCCATGTTTCAACAACTAGGCTTATCATCTACAACTTGCCGAAGTCAATG TCTGAAAAAGAACTGAAGAAGCTTTGCATTGATGCAGTCAAATCTAAAGCTACCAAGCAAAAACCTATAATTCGCCAGATAAAGTTCTTGAAAGATGGAA GGAAAGGAAATGCTGTTCCTGAACGCTATTCTCGTGGAGTTGCCTTCGTTGAATTTTCAGAGCATCAACATGCTCTTGTGGCTCTTAGAGTACTTAACAA CAATCCTGAAACTTTCAACTCTGAACATCGGCCGATTGTGGAGTTTGCTCTTGATAATGTCCAAACATTAAAACTTCGTAAGGAGAAGATACAATATCAG CAACAAGCTCCTCGCGATGACAACGAGGGAAAGGAAAATGGTGAACCCAGCAAGGAACAAGGTCACACACATACCAAGGACAGAAAACGAAAATCTCAAG AGGATGGCAAACCAGTAGGTAAGGAGTCGGCGAGGAATACAAACAGTGAATCAAGTGGAAAATTCACTGAAGGACACAAATTCAAAAGACAAAAAGGCAA CCATAAGAATAACGGCGCCGAAGACTCTCCTCTGAAACAAAATTCGGATGCCTTGTCCAGAAAGCCAAAGACTGTAAAAGGCACCGGGAACCATGGAAAT ACATCACATGAAGCTCAAAACACTACCATTGATACCAATAGAGTGAAGACAGGAAACAAAGATGATGTTGGATTTAGAAAAAGGAAGATGCAAAACCAAG AAGAGGCAGGGCAAGATGCTTCTAGGAAACGTTCTAAAAAGAAGAAAGCTCCAGTAGGGAAAGAAGCAGTAGATAAGCTTGACATGCTTATAGAACAATA TAGATCCAAGTTCTCACATAAAGGCTCTCAAGGGAATGATGGTGATAAAAAACCTTCCAAGCAGCTTAGGAAATGGTTTGAGTCATAGTTTAACAATTAT CATCCTATGATTTTTGTCACTTAAAAATACCAATTTTCTTGGTACAAACGTCAGTTGTTACTAGCTCAGAAAGTTGAAGAATTTTACATAATCTGCAATG CTACATTGTGCTGGTTGTCCCCATCTATTTTTGATTTAGAAATTTGTGCAACATTTTTGCCATAGTTTGTAATGTTTTTAAGGAATGTGCAATAGATTCA AAAGTTTGCCGCATAATACTAATTGAGTATCACAACACCACTTAAGTTTTAC BLAST
Tissuepods
Gene nameLI_gene_177216; 
Additional informationdetails; 

Expression of Ll_transcript_346414

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_346414

BlastpRNA-binding protein 28 from Homo with 32% of identity
BlastxRNA-binding protein 28 from Homo with 36.36% of identity
EggnogRNA binding motif protein 28(ENOG410XSHP)
KeggLink to kegg annotations (55131)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019449597.1)
PfamRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;