Ll_transcript_346419

• Id Trinity: TRINITY_DN50437_c0_g1_i8
• Name Transcript: Ll_transcript_346419
• Sequence: CGGGGAGACTCATAATTCAGAAACAGCATATAGGTTTTGCAGCCGACGGAGAACCGCTTCCACCGTCGCCTCACTCCACTTGTTCCGCCGCCGTCAATAG TCATGGGAAAGAACAGTAATAAATTGAAAGAAAATGGGAAAGAACACTCCAACTTAACCATTTTCGTTTCTAACTTACCTTACTCTTTTTCCAACACTCA GCTTGAGGAAACGTTTAGTGATGTTGGACCTGTCAGGCGTTGCTTTATGGTTACACAAAAGGGGTCTGCTCAGCATCGTGGTTTTGGTTATGTGCAATTT GCTGTTGAGGAAGATGCTATCCGTGCTATTGAGCTGAAGAATGGTTCACCTGTTGGGGGTCGGAAAATTGCAGTGAAGCATGCAATGCCTCGTCCTACTC GTGAGGCACGACAGTCGAAACCAAATCAAGCGGGTAAGACAGATGACCGCACAGAGTCAAAAAATGATGATAAAGATGGCATATCTTCTGAAGCAGATAA ACCTGTTTCAGTTTCAGATAAACCCGTTTCAGTTTCAGATAAACCTATTTCAGTTTCGAAGAAAGAAGAGGTACAAGTGTCAAATAAGCAAAGGATCTCA AAGAAGCCCATGGAAGTAAGAAAAGCAGCTCTCTGCAATGACATACCGGATGAGGGCTCAGAAAAACAGAGGGTTGCTAGAACTGTTATATTTGGTGGTC TCAAGAATTCTGACATGGCTGAACATGTTCACCGCCAAGCCAAAGAGATTGGCACTGTATGTTCTATTAAGTATCCACTTCCAAGGAAAGATCTTGATCA TGGTCTCCTGCAAGATGGCTGTGTTTTGGAGGCTTCTGCTGTACTTTATACAAGTGTAAAATTAGCCCGAGCTGCTGTTGCATCATTACATAAAAAGGAG ATAGGTGGGGGAACTGTTTGGGCAAGACAACTGGGTGGAGAGGGCTCCAAGACTCAGAAATGGAAGCTTATTGTCAGAAACCTTCCTTTCAAGGCCAGAG AAGATGAAATAAGGGATATATTTGCATCTGCAGGGTATGTGTGGGATGTATTCATTCCACGCAAATCAGACACGGGTCTGTCTAAGGGCTTTGCATTTGT AAAATTCACGTGCAAGCAAGATGCAGAAAATGCCATTCAAAAGCTCAATGGATTTACATTTTCAAAACGGCTCATAGCAGTTGACTGGGCTGTTCCAAAA AAGATATTTAACAGTGATGCAAATGCTGCTCTTGCTTCAGAAGAAGGAGAAGAAAAGGTGAACGATGAAGATGGTAGTGCTACCGAGAGTGATGGAGATG ACAGTGATTTAGATTCTTCTAGTGCCGTGGAAGAGGATGGTGCTCCCTCTGAAATTAATTTTGAAAAGGAAGCAGGCATTGCAAGGAAGGTTCTTAACAA CTTGATTACATCCTCCACCAAAGGAGCATCAGTAAATAATGATTCTGTGTTGAGAGGAAACGAGGAGCCAAAATCCAATGAAATTGTTAAGGATGCAGAT AATAAAGCATCTGATGAGACTGAAAAGGTTTTAGATGTTTCTAAGCCTGAAATCTCCGACAAAAGCAAGTTATCAAATCTCAAGCAAGCAGAAGAAGCTG ATTTGCAGAGAACAGTTTTCATAAATAATCTTCCTTTTGATTGTGACAATGAAGAAGTGAAGCAACGTTTTTCTGGATTTGGGGAAGTGGAATACTTTGC TCCTGTTCTCCACCAAGTGACGAAGCGACCAAGAGGAACTGGTTTTCTCAAGTTTAAAACCGTGGAAGCAGCTGATGCTGCAATTTCTGCAGCCAGTGCT GCTTCCGGCGTGGGCGTTCTACTGAAAGGTAGAGCATTAAAAGTTTTGAAGGCTTTGGATAAAAAATCGGCACAGGACAAGGAAGTGGAGAAAGCTAAAA ATGAGGTTCAAGACCACCGAAATCTTTACTTGGCAAAGGAGGGACTCATTCTTGAGGGAACACCAGCTGCTGAAGGGGTTTCATCCACTGATATGTTAAA ACGCCAAGAGTTGGAAAGGAAGAAGAAAACAAAGCTACAATCACCAAATTTCCATGTTTCAACAACCCGGCTTATCATCTACAACTTGCCCAAGACCATG ACTGAAAAGCAACTGAAGAAGCTTTGCATTGATGCAGTCAAATCTAAAGCTACCAAGCAAACACCTTTAATTCGCCAGATAAAGTTCTTGAAAGATGGAA GGAAAGGAAATGCTGTTCCAGAACGCTACTCACGTGGAGTTGCCTTCGTTGAATTTTCAGAGCACCAGCATGCCCTCGTGGCTCTGAGAGTTCTTAACAA CAATCCTGAAACTTTCAACCCGGAACATCGGCCGATTGTGGAGTTCGCTCTTGATAATGTTCAAACATTGAAACTTAGAAAGGAAAAGCTTCAATATCAG CAGCAAGCTCCTCATGCTGACAACAATGGCAAGGAAGATGGTGAACCGGGCAAAGAACTAGGTCATGTGCATACCAAGGACAGAAAACGAAAATCTCAAG AACCTGGCAAATCAGCAACGAAGGATTCAGCAGTTAGTACAAATAATGAATCAGGTGGTGCAGTGGCAAGTGAAAAATCCCCTGAAGGACACAAATTCAA AAAACAGAAAGGCAACCATAAGAATAAAAGTGCTGAAGAGTCTTCGCTAAAACAAAATTCAGATACCTTGTCTAGGAAGCCGAGGAATGAAAAAGGTGGC CGGAATCATGGTAATACATCACATGAAGCTCAAAACACTACCATTGACACCAATAGAATAAAGGCAGGAAACAAAGTTGATGTTGGATTTAGAAAAAGGA AGCTGCAAAACCAAGAAGAGCCGGTGCAAGATGCTTCCAGAAAACGGACTAAAAAGAAGAAAGCTCCAGTAGGGAAAGAAGCAGTAGATAAGCTTGACAT GCTTATAGAACAATATAGATCCAAGTTCTCACATAAAGGTTCTCAAGGGAATGATGGTGACAAAAAACCTTCCAAACAGCTTAGGAAATGGTTTGAATCA TAGATAACTATTACCATACTATGATCTATGAATTCGTCTCTTAAAAATACCATTTTTCTTTACAAATGTCAGTTGTTACTAGCTCCTAAAGTTGAAGAGT GTGACATTATTTGCATGGTGCCTTGTGCTGGTTATCTCCCATCCCCTGATCCTCTAATTTTTGGAAATATTCTGCAACATTTTTGTCATTGTTTGTAATG TTTGAGGAATGTGCAATAGATTGAGAATTTTTGCTATATATTCCTGGATTTGTTTGTTTATTTGATAGATACTATGTATTGATTTTAATATAGGTGAGAA CTGAGAAGACATTTTAATGCAGGAAAAATAATAGAGTGGAAGAACAATGGATATATCATTATTATTTGATACAAAAATTTGGATCACTT
• Tissue: pods
• Gene name: LI_gene_177216;
• Additional information: details;

Expression of Ll_transcript_346419

FPKM

• PAB: 0.3
• PNAB: 7
• PS1: 4.7
• PS2: 6.2
• PS3: 6.7
• PW1: 5.2
• PW2: 5
• PW3: 4.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346419

• Blastp: RNA-binding protein 28 from Homo with 36.64% of identity
• Blastx: RNA-binding protein 28 from Homo with 36.64% of identity
• Eggnog: RNA binding motif protein 28(ENOG410XSHP)
• Kegg: Link to kegg annotations (55131)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453431.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;