Id Trinity | TRINITY_DN50439_c0_g1_i6 |
---|---|
Name Transcript | Ll_transcript_345484 |
Sequence | AATAAGAGCACCAATCCTAAGTTTATAAATATTGCTTTTGGTACATTGGCTTATTGGCATATACAAACCATTGAATCTCAAACTCACTCATATGTTCTTG AAGCCATGTTGCACTATTCATGTTCCCTTGTTTAATCTATCTCCACATTTTCCTATCACTTTCTCAGTTTTCTAGTTACTGAATCTTGTTAACACACCTA CTAAAACATATAGAAAACAAGAAAATCATGTAAACTATACTTGGTTGGTTTTTGCTACAAGTTTTAGTTCCAATGGCAGCAAAGTAAATTTCTGCAGAAT TTGGTATTCATATTCCCTTAATCACTTTTTTGGGTTGGAAAAAGCTATGGAAGAAACATTTGTACCTTTGGAAGGAATCAAGAATGATCTAAGAGGAAGG TTAATGTGTTACAAGCAAGATTGGAATGGTGGAATCAAAGCAGGGATAAGGATTTTGGCCCCCACCACATACATATTTTTTGCTTCTGCAATACCTGTCA TTTCATTTGGTGAACAACTAGAACGCGATACCGGTACAAAAATGTTTTAACTTCGGAATGTTTTGAATTGCGGTTGTGGTTATTGCGAGCTAATATGGGT TAATGTGATCTGCAATCACAGCCGAATATGTGGTTGTATCAGTCATCGCAGTCGAGATTTTGCAGCCTGCAATTTAAAACCTATTAGTCCTCTCAGTTTA TAATAGTAATCCTTTAATAGTAGTACTACTAAGTCCTCTCTCAGTAATAGTAGTACTAATATAGCACTGTACTATTAAGGCTTGATAATAAGTACCAATT GTTTTCAGAGGGTGTTCTAACGGCTGTTCAAACCTTGGCATCTACTTCGATATGTGGCATTATACACTCGATCATCGGTGGTCAACCCTTACTGATTTTA GGAGTGGCAGAACCTACTGTTATCATGTATACATTCATGTTCAATTTCGCGAAAGAGAGACCCGAGCTGGGTCGAAATTTGTTTCTCGCTTGGACCGGAT GGGTATGTGTCTGGACTGCAATACTGCTATTCTTACTAGCCATCTTAGGAGCTTGCTCCATAATCAACAGGTTTACGCGTATTGCAGGAGAGTTGTTCGG TATGCTTATTGCAATGCTCTTCATGCAGCAAGCTATCAAGGGACTAGTGGACGAGTTTCGCATACCGAAGCGAGAAGATCCAACATCAACTCAGTTTTTA CCTTCGTGGAGGTTTTCTAATGGGATGTTCGCTTTAGTCCTTTCATTCGGCCTTCTCCTCACTGCATTAAAAAGTAGAAAAGCTAGATCGTGGCGTTACG GTAGTGGTTGGATTCGCAGCCTAATAGCCGACTACGGTGTTCCCCTTATGGTCCTAGTTTGGACAGGTGTATCCTACATGCCATCTGGAAATGTTCCACA TGGTATCCCAAGGCGCCTCTTTAGCCCAAATCCGTGGTCACCCGGTGCATACGAAAATTGGACTGTTATTAAGGATATGACGAATGTTCCGGTTGTCTAC ATAATTGGAGCATTTATCCCAGCAACCATGATTGCAGTGCTGTATTACTTTGATCACAGTGTTGCATCCCAACTTTCACAGCAGAAAGAGTTCAATTTGA GAAAACCATCTTCTTACCATTATGACTTGCTCCTATTGGGATTCTTGACCTTAATGTGTGGCCTTATTGGAATCCCTCCTTCGAATGGAGTCATACCGCA ATCACCTATGCATACGAAGAGTCTTGCAACTCTTAAACATCAGTTGCTTCGTAATAGACTAATGTCGACCGCACGAAAAAGTATCGCAAAAAATGCGAGT TTAGGACAATTATATGGCAATATGCAGGAAGCCTACCATCAAATGCAGACACCTCTTATTTACCAGGACCCCTCTGCTCAAGCACAGGGACTAAAAGAAT TAAAAGAATCAACCATTCAAGCAGCTACCAGCTTAGGAAACATGGACGCCCCGGTAGACGAGACGATGTTTGATGTCGAGAAAGAAATAGACGACCTACT ACCTATCGAGGTAAAGGAACAGCGCGTCAGTAACTTGCTTCAATCAATAATGGTGGGAGGATGTATTGCAGCCATGCCGTTCCTCAAGAAAATTCCGACC TCGGTCCTATGGGGCTACTTTGCCTTTATGGCTATTGAAAGTTTGCCCGGAAACCAGTTTTGGGAAAGGATACTATTACTCTTCACTGCACCAAGCAGAA GATATAAGGTGCTTGAGGATTATCATGCAACTTTTGTTGAAACTGTACCTTTCAAGACAATAGCAACATTCACCATTTTCCAAACACTTTATCTTTTTGT ATGTTTTGGACTAACTTGGGTTCCTATTGCTGGAGTCATGTTCCCTATGATGATCATGCTCTTAGTTCCGGTTCGACAGTACTTTCTCCCGAAATTTTTC AAAGGATTACACCTTCAAGACTTGGATGCAGCAGCATATGAAGAACAAACTGCTTTACCATTCAACCTTGCAACACAATCAGAATTTGGAGGTGGTGCTA CTCAGATTGATGAGAGTGAGATCCTAGATGGTGTTATCACTAGAAGCCGTGGCGAGTTTCGGCGAACTAGCAGTTCAAAGGTCACAAGCACAACTCCAAC ACCAGGGAATGATCACAAGAGCCATCAGAGCCCGCGTGTCTCGTTCAATTCGCGCGCTAGCGCGCTAACAACTGAACGAAGTCCTCGGTCGGGCACCAGA AGTCCCTATAGTCCAAATGGTAGAGAAATGAGATTACCAAACCTGGGAAGAAGTCCTCTTAACCCTGATTCAAACTGCAGGACTACAAAGAAGTAGTCAC ATTCCTTATAAGGATTTAGAAAGCTTATGGTATTGCTTCATTTCCAAATTTACATGTTAGTTTGGTCTTTAATTTTGTTTGGCATGGTTGTAACTTGTAA AGTCTTTTCCATATCCTATGTACAAGAGATATGTAAGTAGAGTGTGGCACTTTCCTATGTATAATGTCAATTGTATTAATCAAATGTTATTATTATGTGT GCACATATATATATATATACCATGAATCTTATGCAAATATGTCACACATTCATAGGTTATTCTAATGAAATTA BLAST |
Tissue | pods |
Gene name | LI_gene_177223; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345484
Blastp | Probable boron transporter 2 from Arabidopsis with 79.97% of identity |
---|---|
Blastx | Boron transporter 1 from Arabidopsis with 78.6% of identity |
Eggnog | solute carrier family 4(ENOG410XPHD) |
Kegg | Link to kegg annotations (AT3G62270) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440672.1) |
Pfam | HCO3- transporter family (PF00955.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |