Id Trinity | TRINITY_DN50440_c0_g1_i1 |
---|---|
Name Transcript | Ll_transcript_345884 |
Sequence | ATTCAGATATAGTTCCCAAATTCACTACATTCATCCAAATACTGAATTTAAGGTTGTCAAGTTTTCCAACATTTACTGTTTTATTTATTAACTTTACTCT GTATGGATATAATATGAGTTTTGTTGAGATGTGAAGAAGAGAAGGATGATGTATATTCCAAAAAAAACTTTATCCCCATGTGCACTACCCTACTGCTTCG GTCAACTAGCACATGCAATGATAAATCCATACAATATCATAAGAAAATTTCAAAGCATTGATGATTATGTTGCAGGACCAAATGAATGGCGTTAAATTGT TACAACTCATGTCACCTAATTGCAATCATTGAAACTACATTATATATACTATCACACCGTTCTTCATTCTGTCTCTCATCTTCACACTGTGTCTCTTTCT TCCTTCTTCTTCTTCTTCTTTTTCTAAGTCTCTTCTTTGAATCTGGGTTTGTTTCTGTTTTGGTTTGAGTAATTAGTGGAGTACCACTTGCTTCATATCT TCAAATCTAGATCTTATCCGTGACTATATTGGGATTTGTGTTTTTAGCTTTGCTCTATTATTTAGTAACACTTTGTAGTACTTCTATAAATTCCATTGGT TCTCTCATTATTCTCTGATTCTGTGGCTTGTTTTTTTTTATGTTTTCGCTGTAGCCAATTGAAAAAGGTAGAAAACCCAGAAATATTATACCTTTTTCTT TCTGGGTTTTTGCAAAAGTATTGAACTTTGTTGTGGCAAAAACTAATGGGTTGTTGTTCAAAATTTTATCTTGTTTTGCTTTTGTCCATTTATGTGGGAG TTTCTTTAGCTTCTCTCTTGGAAGATCAAAAGAGAGATAAGATTACTAAACTGCCAGGACAACCAGGGAATGTGGGATTTGATCAGTACTCAGGGTATAT TACTGTGAATGAGCAGAGAGAGAGGGCATTGTTTTACTGGTTGGTGGAAGCACCACTCAATCGTAGACCACACTCAAGGCCATTAGTGTTGTGGCTTAAT GGTGGCCCTGGATGCTCCTCCGTTGCTTATGGTGCATCCGAAGAAATTGGCCCTTTTCGCATTAGGCCTGACGGCAAGACACTTTTCGTAAATCCTTATG CTTGGAACAATTTGGCAAACATACTGTTCCTTGATTCTCCTGCTGGTGTTGGTTTTTCATATTCTAATAAAACAACAGATCTGTACACCTTTGGTGACCA AAAAACGGCTGAGGATTCATACACGTTTCTTGTTAATTGGTTTGAAAGGTTTCCTCAGTATAAGCATAGAGAATTCTACATTGCTGGAGAAAGTTATGCA GGTCATTATGTTCCTCAGTTGGCACAACTTGTATACCAGAAAAATAAAGGAATCAAGGATCCGGTTATAAACTTCAAGGGATTTATGGTTGGAAATGCTG TTACAGACGATTATCATGATTATATCGGTACATTTGAGTACTGGTGGACCCATGGTTTGATTTCAGATTCCACATACAGGATGCTAAGAACAGTCTGCGA ATTCGGGTCCTCCCAGCATCCATCAGTGCAATGCATGGAAGCTCTCAGAGTTGCAGTTGTGGAGCAAGGAAACATTGATCCATATAGCATTTATACACCG CCTTGTAATGATACATCAGCCCTCAGAAGCGGTTTGAAGGGGCGCTATCCATGGATGTCTCGAGCATACGACCCATGCACTGAAAGGCATTCTGATGTTT ATTATAATCTTCCAGAAGTTCAGGAGGCACTTCATGCCAATGTAACTGGGATTCCTTATTTATGGAAGACGTGCAGTGATATTGTTGGGAACTACTGGAC TGATTCTCCACTATCTATGCTTCCTATATACCGAGAACTTATTGATGCTGGTCTCAAGATATGGGTATACAGGTACCTGGCTTCTTTTTTCATCTTTCAG TTCTATTTTGTGAATTAAAGCGTTTCAGCTATTTGGTTGCTCTAAAACTGGAATGAATTTTTCATAATTAATAGGAAATCATTCTGTTATATAGACTACA GAGAAAAATCTACTTAAACTTTACAGATGTAACATTAGTGTCCGGTTCAAGAAACCTTAGTCTTGTGTTTCTCAAAGGGCATTCCATAAATAATATAAAA CGAAATTTGAAAGAAATACAACAACCAAGCAATATACCTTGGCTTAGATGGATACAAACAATGCTAATGTTTTCTTGGTAAGCAAACAAATATATTAAAG GAGCATATCGGGTGTTCACCCATGTACAAAAAGAGTACATAAGCTAGATGGATTATAACCATGCCAATGTGTTCTAATCTAAAAGCAGTTTTTCAGAAAG AGCATTTAGATGAAGTATTTTCTCAATGTTTTCGAACTTAGAAAGGAATGAATAGTAATGATCATAGACATATTGAGTGCTGCAGAGTGCAGACCATATG TCTGGTTTCTTCTTATAGCTATTAATTATAGGCATGCAGTGAAATTGATGTTAGGACTTACATTATAGATCATTATTGATCAATAGGCCATATTTCTTAC ATTCTAGAAAATATCAGAGTTCAAACCAGACCACTGGTTTCGGGGTAGAAAAAACCGGTAACACTACCTGCCTTTGTTGACTGATACAGAACAATAATAT AAGATAGTGGCCAAGGAGGACTTGTTTTCTGTGTCTTCTTCATTATTGATTTCGGAAATGTTGTGTGACTACTGCTTGCCTCTAATTGATTGCAAATCTC AGGCATCATTGAGTTTGTTTGTATTTGATCATTCTACGGTTAATGGTGAATCCGTGAATGTATAACTGACTAGATTTATTAATTCATTCTTGCTAAAATT ACAATTGCAATCACTTATAAATAACTTCGCACGAAAAGGCAGCTTATTTTTCAATGTATAATAATAAAGTTGATTTCGAACATCATGTTGCATGCAGTCT AAATTTGACTGCACCTAATGCAGTGATGAATCCCACAACATTTGCTTGTTGGGTTACATTTAGCATACTTTTTTCAATGTGCTCATAGTCATTTTCTCAA ATGCTGAATCCAAATCCAAATGAAACTGCTAACTGTTACATGTTTGAATGCAGTGGAGACACTGATTCTGTTGTTCCAGTTACGGCCACTCGATATTCTA TTGATGCCTTGAAGCTCCCTACAATAATCAACTGGTACCCTTGGTATGACAATGGCAAGGTTGGTACTAACTTTATGTTCTGAGTAACATCTACCTATGT TTTTTGTCATCTTATTATCTGTTAGCTAAGAATTTTTCGGCTCTTCTATGTTAAGGTTGGTGGATGGAGTCAAGTTTATAAAGGACTCACATTGGTAACA ATAAGAGGAGCAGGACATGAGGTTCCACTTCATAGACCTCGCCAAGGATTTATTCTTTTCAGATCATTCATGGAGAACAAGTCTATGCCATTATCCTAAA TTTAAGGAACATTATGGAATAATCATAGTACTATTACATGTACTATTATTCTTGCAACCTAGGCAAGAATAGCTTTCATTCAATGAGACTGAGACAATAG AATAAGGGATGCATTCCTCATGAGTTCCATCTTAGCTCTCTGCCTCAAATATTGGATAAATTTACCAATACTAGCTCTTCTATTTTTATTTGTTATTAAA ATTGTGATTATATATATATATATATATATATATATATATATGGAATGTTATTCTTTATAAGGTTTCATTTTGCAAGACTAATGTCATGTACAAAAAAACT GTCCTCAAATGAAAAGTTTCAACTTTGCATTTAGTCCTGAATGATAATACTTAC BLAST |
Tissue | pods |
Gene name | LI_gene_177224; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345884
Blastp | Serine carboxypeptidase-like 27 from Arabidopsis with 76.55% of identity |
---|---|
Blastx | Serine carboxypeptidase-like 27 from Arabidopsis with 76.55% of identity |
Eggnog | carboxy-peptidase(COG2939) |
Kegg | Link to kegg annotations (AT3G07990) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441943.1) |
Pfam | Serine carboxypeptidase (PF00450.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |