Id Trinity | TRINITY_DN50442_c0_g1_i10 |
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Name Transcript | Ll_transcript_345106 |
Sequence | GAATAAGAGAAAAAAGTCATCGGCATAGTAGTTTGAAGGAAGAAGTTAAAGAAGGTGAAAAGTGAGAAAGTTGAAGTTGAAGAAAAAGAGAAGTAAGAGA GTGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGCGGTGGAAGTGGAGTGTTGTGGAACAAAGTTTGCATTGTTCATTTTGATAATAGTTGGA TTAGTATGCTTTGCAGGATTAATGGCTGGTCTCACTCTTGGTCTCATGTCTTTAGGACTCGTCGACCTCGAAGTTCTCATCAAATCTGGTCCCCCCAAGG ATCGAATTCATGCTGGCAAAATTTATCCGGTGGTTAAGAACCAGCATCTTTTGCTTTGCACGCTTTTGATCGGAAACTCCTTGGCTATGGAGACTCTTCC CATTTTTCTTGATGCACTTGTGCCTCCCTGGGCTGCAATTTTGATTTCGGTCACCCTTATCCTCTTGTTTGGAGAGATATTACCGCAAGCGATCTGTACT CGATTTGGATTGACAGTTGGAGCGACACTGGCCCCACTTGTTAAAGTTCTTCTAGTAGTATTCTACCCCATCTCTTATCCAATCAGCAAGGTTCTTGATT GGATGTTGGGAAAAGGACATGCTGCCCTTTTAAAGAGGGCAGAGCTCAAAACTTTTGTGAATTTTCATGGAAATGAGGCTGGTAAAGGAGGAGACTTAAC ACATGATGAGACAACCATCATAACTGGTGCACTTGAATTGACCGAAAAAACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTG GATGCTACCCTTAACTTGGACACACTGAATACAATAATGACATTAGGTCATAGTAGAGTTCCAGTTTTTGCAGGAGACCCAAGTAATATAATTGGACTTG TTCTGGTTAAAAATCTCTTTATGGTTGACTCAAAGGCTGCAGTTCCTCTAAGAAAAATGATCATCAGAAAAATTCCTCGTGTTTCAGAGAACATGCCTCT TTATGATATACTGAATGAATTTCAGAAAGGTCACAGCCATATTGCAGTTGTGTATAAGGATCTAAATGATAAAAAAGACACACCCAAAAGAGTTAAAGAT CGAGAACGTTATGACTTTAAGGACAGCTGCAAGAACAAGGGAGAAATGGCGCCCTTGGATAAAAGTAGCGATTTAAATAAAAGTAGAATAATGTTTCATT TTGTTCAATGCATGTTTTTGAAATAAACCATTTTGTTGAGAGCATGATTTTGAAATACCTTGCTGGCTTGCAATTTGTTAATAGTTCCTTTGAAGGGTTC ATCATTCCTCCAGTTTGCTGACGTTGCTGAATATATCTGAAACTAATTGTGCCCATAAATTATCTGCTGCATTCAATTTGTGCTTCCTTTTCAAGTTCGT TTTCAGCACACGATTTTCAGTTTTTTACTCCACACACTTGTGGTTTTTTTAGCTATATCTTCGAGGCATACGTATGCCGCAATTGCATTCTATGGTCTTG GTTGATCTACCTAACGAAACCTTTGATGATTATCTTGCTGACCTGACCGTTGCCACAAATATAGGTGTCAAATCCCAGTCAGGTGATACTTTGACTACTA TTGCTAAGGTTGATGGCAGTCCAAAGGTGAAGAAGAGTTCACCAGCTAATCCCGCTCCTGCCTTTAAGAAACGACATAGAGGTTGTTCACATTGCATCCT CGATGTTGATAATGCTCCCTTGCTCGTTTTTCCACCCAATGAAGTAGTTGTTGGTGTTATTACAATGGAGGATGTCATTGAAGAGCTTCTTCAGGTTAGA TGTTTCTTCAGTGCTCTTTATAGTTAAAATTACTGGTTTGGTCCCTGCATTATTTGGTCCTGAACTATGTTGGTGATGTAACTCTAATTGTCACTGAACA CAATGATTAAATCTGCCAGTTTTTTTTGCCCCGATATTCACCATTCAGTTTTTTTGCCTACTCATTATACATGATTAAGTACTACTATCATATTAAAATT TGTGAAGAAAGAACTACTTAAGTTCTGCACTATGATTATTGTGGAAGCAACACGACATTTCTTCCTACCGTTGCCTTTTAAATCTATTGTCTTGCCTTAT CGATTTTGTTAAATCGTTGCACATTATTTCAGGAGGAGATATTAGATGAAACTGATGAATATGTCAATATCCATAACAAGTAAGTTTAAACGTTTTCTGC TGAATTGGCATATGAATCCCGAAGTCTTGGTATTTTAGTGTAGTTTGGAAGTGGTTGAACACTGTTAGGTTGTAGTATGAAGCACATTAAGTTGATCAAT TTCTTGATAATGCAGGATAAAAGTTAACATGAATGCTTCCAAGGAGAAGCTTCCTAATGCAATTCCGGTTCAGCCTTCTCCTTTAGCAGTTCAAGGACAC ACACCAACTAATTCAGTTTCTACAGCTACTTCTCCGACAGGCTCGCCTACGACAGTCGATCAAATCTCGGAAAACGATTCACTCAGGAATCAATAATTCA TTCATTAAGAATAAGAGGGTAGCATAGGTTTAAGGCAGATCTGTATATAATTTATTGTAGAAGTTTGGCATTATGACATTATGTTTATATGCAGAAAGGA ACACTTGATATAATAAGAGGATTGTGTCTTTGAACTAGATTCTGCAAGACAACAATTACATTTAGACTATAACTACAGCTACTTAGCATTAGTGAAGATA AACACTTTCTGAAGATGCACTCTTGTCTTTTAGCATTATAAAATTTTGGGAATCAACATGCTTTTGGAATGGAATTGTATCAAAATGGTGATTCTAATAT TTGTTTTATTTGTCACAACTTTAGCAATGGCAAAATCATG BLAST |
Tissue | pods |
Gene name | LI_gene_177237; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345106
Blastp | DUF21 domain-containing protein At1g47330 from Arabidopsis with 75.07% of identity |
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Blastx | DUF21 domain-containing protein At1g47330 from Arabidopsis with 76.12% of identity |
Eggnog | CBS Domain protein(COG1253) |
Kegg | Link to kegg annotations (AT1G47330) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432495.1) |
Pfam | Domain of unknown function DUF21 (PF01595.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |