Ll_transcript_345108

• Id Trinity: TRINITY_DN50442_c0_g1_i12
• Name Transcript: Ll_transcript_345108
• Sequence: GAATAAGAGAAAAAAGTCATCGGCATAGTAGTTTGAAGGAAGAAGTTAAAGAAGGTGAAAAGTGAGAAAGTTGAAGTTGAAGAAAAAGAGAAGTAAGAGA GTGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGCGGTGGAAGTGGAGTGTTGTGGAACAAAGTTTGCATTGTTCATTTTGATAATAGTTGGATT AGTATGCTTTGCAGGATTAATGGCTGGTCTCACTCTTGGTCTCATGTCTTTAGGACTCGTCGACCTCGAAGTTCTCATCAAATCTGGTCCCCCCAAGGAT CGAATTCATGCTGGCAAAATTTATCCGGTGGTTAAGAACCAGCATCTTTTGCTTTGCACGCTTTTGATCGGAAACTCCTTGGCTATGGAGACTCTTCCCA TTTTTCTTGATGCACTTGTGCCTCCCTGGGCTGCAATTTTGATTTCGGTCACCCTTATCCTCTTGTTTGGAGAGATATTACCGCAAGCGATCTGTACTCG ATTTGGATTGACAGTTGGAGCGACACTGGCCCCACTTGTTAAAGTTCTTCTAGTAGTATTCTACCCCATCTCTTATCCAATCAGCAAGGTTCTTGATTGG ATGTTGGGAAAAGGACATGCTGCCCTTTTAAAGAGGGCAGAGCTCAAAACTTTTGTGAATTTTCATGGAAATGAGGCTGGTAAAGGAGGAGACTTAACAC ATGATGAGACAACCATCATAACTGGTGCACTTGAATTGACCGAAAAAACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGA TGCTACCCTTAACTTGGACACACTGAATACAATAATGACATTAGGTCATAGTAGAGTTCCAGTTTTTGCAGGAGACCCAAGTAATATAATTGGACTTGTT CTGGTTAAAAATCTCTTTATGGTTGACTCAAAGGCTGCAGTTCCTCTAAGAAAAATGATCATCAGAAAAATTCCTCGTGTTTCAGAGAACATGCCTCTTT ATGATATACTGAATGAATTTCAGAAAGGTCACAGCCATATTGCAGTTGTGTATAAGGATCTAAATGATAAAAAAGACACACCCAAAAGAGTTAAAGATCG AGAACGTTATGACTTTAAGGACAGCTGCAAGAACAAGGGAGAAATGGCGCCCTTGGATAAAAGTAGCGATTTAAATAAAAGTAGAATAATGTTTCATTTT GTTCAATGCATGTTTTTGAAATAAACCATTTTGTTGAGAGCATGATTTTGAAATACCTTGCTGGCTTGCAATTTGTTAATAGTTCCTTTGAAGGGTTCAT CATTCCTCCAGTTTGCTGACGTTGCTGAATATATCTGAAACTAATTGTGCCCATAAATTATCTGCTGCATTCAATTTGTGCTTCCTTTTCAAGTTCGTTT TCAGCACACGATTTTCAGTTTTTTACTCCACACACTTGTGGTTTTTTTAGCTATATCTTCGAGGCATACGTATGCCGCAATTGCATTCTATGGTCTTGGT TGATCTACCTAACGAAACCTTTGATGATTATCTTGCTGACCTGACCGTTGCCACAAATATAGGTGTCAAATCCCAGTCAGGTGATACTTTGACTACTATT GCTAAGGTTGATGGCAGTCCAAAGGTGAAGAAGAGTTCACCAGCTAATCCCGCTCCTGCCTTTAAGAAACGACATAGAGGTTGTTCACATTGCATCCTCG ATGTTGATAATGCTCCCTTGCTCGTTTTTCCACCCAATGAAGTAGTTGTTGGTGTTATTACAATGGAGGATGTCATTGAAGAGCTTCTTCAGGAGGAGAT ATTAGATGAAACTGATGAATATGTCAATATCCATAACAAGATAAAAGTTAACATGAATGCTTCCAAGGAGAAGCTTCCTAATGCAATTCCGGTTCAGCCT TCTCCTTTAGCAGTTCAAGGACACACACCAACTAATTCAGTTTCTACAGCTACTTCTCCGACAGGCTCGCCTACGACAGTCGATCAAATCTCGGAAAACG ATTCACTCAGGAATCAATAATTCATTCATTAAGAATAAGAGGGTAGCATAGGTTTAAGGCAGATCTGTATATAATTTATTGTAGAAGTTTGGCATTATGA CATTATGTTTATATGCAGAAAGGAACACTTGATATAATAAGAGGATTGTGTCTTTGAACTAGATTCTGCAAGACAACAATTACATTTAGACTATAACTAC AGCTACTTAGCATTAGTGAAGATAAACACTTTCTGAAGATGCACTCTTGTCTTTTAGCATTATAAAATTTTGGGAATCAACATGCTTTTGGAATGGAATT GTATCAAAATGGTGATTCTAATATTTGTTTTATTTGTCACAACTTTAGCAATGGCAAAATCATG
• Tissue: pods
• Gene name: LI_gene_177237;
• Additional information: details;

Expression of Ll_transcript_345108

FPKM

• PAB: 0.5
• PNAB: 1.5
• PS1: 1.4
• PS2: 1.3
• PS3: 1.4
• PW1: 1.8
• PW2: 1.1
• PW3: 2.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345108

• Blastp: DUF21 domain-containing protein At1g47330 from Arabidopsis with 75.07% of identity
• Blastx: DUF21 domain-containing protein At1g47330 from Arabidopsis with 76.12% of identity
• Eggnog: CBS Domain protein(COG1253)
• Kegg: Link to kegg annotations (AT1G47330)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432495.1)
• Pfam: Domain of unknown function DUF21 (PF01595.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;