| Id Trinity | TRINITY_DN50442_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_345102 |
| Sequence | GAATAAGAGAAAAAAGTCATCGGCATAGTAGTTTGAAGGAAGAAGTTAAAGAAGGTGAAAAGTGAGAAAGTTGAAGTTGAAGAAAAAGAGAAGTAAGAGA GTGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGCGGTGGAAGTGGAGTGTTGTGGAACAAAGTTTGCATTGTTCATTTTGATAATAGTTGGA TTAGTATGCTTTGCAGGATTAATGGCTGGTCTCACTCTTGGTCTCATGTCTTTAGGACTCGTCGACCTCGAAGTTCTCATCAAATCTGGTCCCCCCAAGG ATCGAATTCATGCTGGCAAAATTTATCCGGTGGTTAAGAACCAGCATCTTTTGCTTTGCACGCTTTTGATCGGAAACTCCTTGGCTATGGAGACTCTTCC CATTTTTCTTGATGCACTTGTGCCTCCCTGGGCTGCAATTTTGATTTCGGTCACCCTTATCCTCTTGTTTGGAGAGATATTACCGCAAGCGATCTGTACT CGATTTGGATTGACAGTTGGAGCGACACTGGCCCCACTTGTTAAAGTTCTTCTAGTAGTATTCTACCCCATCTCTTATCCAATCAGCAAGGTTCTTGATT GGATGTTGGGAAAAGGACATGCTGCCCTTTTAAAGAGGGCAGAGCTCAAAACTTTTGTGAATTTTCATGGAAATGAGGCTGGTAAAGGAGGAGACTTAAC ACATGATGAGACAACCATCATAACTGGTGCACTTGAATTGACCGAAAAAACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTG GATGCTACCCTTAACTTGGACACACTGAATACAATAATGACATTAGGTCATAGTAGAGTTCCAGTTTTTGCAGGAGACCCAAGTAATATAATTGGACTTG TTCTGGTTAAAAATCTCTTTATGGTTGACTCAAAGGCTGCAGTTCCTCTAAGAAAAATGATCATCAGAAAAATTCCTCGTGTTTCAGAGAACATGCCTCT TTATGATATACTGAATGAATTTCAGAAAGGTCACAGCCATATTGCAGTTGTGTATAAGGATCTAAATGATAAAAAAGACACACCCAAAAGAGTTAAAGAT CGAGAACGTTATGACTTTAAGGACAGCTGCAAGAACAAGGGAGAAATGGCGCCCTTGGATAAAAGTGTCAAATCCCAGTCAGGTGATACTTTGACTACTA TTGCTAAGGTTGATGGCAGTCCAAAGGTGAAGAAGAGTTCACCAGCTAATCCCGCTCCTGCCTTTAAGAAACGACATAGAGGTTGTTCACATTGCATCCT CGATGTTGATAATGCTCCCTTGCTCGTTTTTCCACCCAATGAAGTAGTTGTTGGTGTTATTACAATGGAGGATGTCATTGAAGAGCTTCTTCAGGAGGAG ATATTAGATGAAACTGATGAATATGTCAATATCCATAACAAGATAAAAGTTAACATGAATGCTTCCAAGGAGAAGCTTCCTAATGCAATTCCGGTTCAGC CTTCTCCTTTAGCAGTTCAAGGACACACACCAACTAATTCAGTTTCTACAGCTACTTCTCCGACAGGCTCGCCTACGACAGTCGATCAAATCTCGGAAAA CGATTCACTCAGGAATCAATAATTCATTCATTAAGAATAAGAGGGTAGCATAGGTTTAAGGCAGATCTGTATATAATTTATTGTAGAAGTTTGGCATTAT GACATTATGTTTATATGCAGAAAGGAACACTTGATATAATAAGAGGATTGTGTCTTTGAACTAGATTCTGCAAGACAACAATTACATTTAGACTATAACT ACAGCTACTTAGCATTAGTGAAGATAAACACTTTCTGAAGATGCACTCTTGTCTTTTAGCATTATAAAATTTTGGGAATCAACATGCTTTTGGAATGGAA TTGTATCAAAATGGTGATTCTAATATTTGTTTTATTTGTCACAACTTTAGCAATGGCAAAATCATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_177237; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345102
| Blastp | DUF21 domain-containing protein At1g47330 from Arabidopsis with 67.81% of identity |
|---|---|
| Blastx | DUF21 domain-containing protein At1g47330 from Arabidopsis with 68.12% of identity |
| Eggnog | CBS Domain protein(COG1253) |
| Kegg | Link to kegg annotations (AT1G47330) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432496.1) |
| Pfam | Domain of unknown function DUF21 (PF01595.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |