Id Trinity | TRINITY_DN50444_c0_g1_i2 |
---|---|
Name Transcript | Ll_transcript_344949 |
Sequence | CCACTATCCATTTAGATTCTGCACTCCCTCTCTACCAACCAAGTGTTCTACTGTCTCAAAATTCCCTTCATTGTAATTACTATTACCACTGTTTTTCTCT TTCTATACATTTTCTTCACCACTTCAAAATGGCCCTTTGTTATTCTTCCAATTTGATCACATTCCACTCAGCAAAGCATCAAAGCCTTGCCTTAAGTCCC TCTTCAGAGTCTTCTCCCTTCTTCAGGCTATTCCGGGTAAGCACAGCTCCTCAAAAATCATATGAACCCATTAAGTGTAGCAGAGAAAGATTGAAACTTT ATGCTTCTCTGACACCATCTCAAGTGGTTGAACCCACCCCATCTACTTTTAGAAACAAAAATCCAAAAGACATTAATGTATTGGTGGTGGGTTCAACTGG GTATATTGGAAAATTTGTGGTGAAAGAGTTGGTTAAAAGAGGGTTTAATGTTATAGCTATTGCTAGAGAGAGGAGTGGAATTAAGGGCAGCAGTGACAAA AATGAGACCTTGGCTCAGTTAAGAGGTGCCAATGTGTGTTTTTCTGATGTTAGCAATTTGGATACTTTGGAAAGTTCTTTGAAAAGTTTAGGGGTTTCAT TTGATGTTGTGGTGTCATGCCTTGCTAGTAGAAGTGGTGGGGTAAAGGATTCATGGAAGATTGATTATGAGGCAACAAAAAATAGTCTTGTTGCTGGTAG GAAGCTAGGGGCTTCTCATTTTGTGTTGCTTTCAGCGATATGCGTGCAGAAGCCCCTTCTCGAGTTTCAACGAGCGAAGCTTAAATTCGAGGCTGAGTTG ATGAAGGAAGCTGAAGAGGATGGTGGTTTTACTTACAGCATAGTGAGGCCAACTGCATTTTTCAAGAGTTTGGGTGGTCAGGTTGAGTTGGTGAAGGATG GGAAGCCATATGTGATGTTTGGTGACGGGAAATTGTGTGCTTGCAAACCAATGAGTGAGCAGGATTTGGCTTCTTTCATTGTGGATTGTGTGCTAAGTGA GGACAAGATCAATAGGATTTTACCGATTGGAGGGCCGGGGAAGGCGTTGACTCCATTGGAACAAGGGGAGTTGTTGTTCAAACTCGTGGGGAAGGAGCCT AAGTTCTTTAAAGTACCAATTGAGGTAATGGACTTTGCCATTGGGGTTCTTGACTTTCTGGTTAAGATCTTTCCTTCGCTGGAAGATGCTGCCGAGTTTG GGAAAATTGGAAGGTACTATGCAGCTGAAAGCATGTTGCTTTTGGATCCCGAGACCGGAGAGTATAGTGCTGAGAAGACACCTAGCTATGGGAATGATAC ATTAGAAGAGTTTTTTGCCAGAGTACTAAGAGAAGGGATGGCCGGTCAAGAGTTAGGTGAGCAAACAATATTTTAACATGATTGTGGTAAAATATGTCTG AATCCAATAGTTCAGTAGACCAACCAGTTTTGTTTGTGTAAATGCATGTATTCAGCCAAAGTCACTTTATAGTTTACCAGCGCAAGGATTGTTTAAAGAC ATTTATTTAGGTATCTAAAAATGCCATTATTGAAACTCATAAATGTAGTGTTCACTCATCACTAAATAAAATTTCCCCTACAGGGCTGTTAAGTTTGATG TTCAAAACCGGTTCGATTTGTTCTGGTAATAAAAGTGGTTGATTGTGCATAAATGTATTTTTCATATTTCCTCTAATGTACTAGTACTACATGAATTCTA TCATGCTTAGTTACTTCTGTCATTTGGTGCTCAAAAAGTGATTTTATTTATGGATTGACCAAACCATCTTTTAAATCACCTATAAGCTGTGAAGATCACC TTCATACAAATATTAGTAATCGATTCAGTACTGCATCCGAGAAGAGATAGTGGAGGAGGAACTTCAATTTGAGTTCTTGCTTCTGTATGAGAGATTGATG CAAGAGCTGTAATGAGGCTATAAAGGCCAGAAACATAGAATGCAGTCACGAAGCATATCATATTGTCAAAATGCAAATCTACAACAAGTATTCTTTAAAA GACTTGTCAATGAGAATGAGGCCTTAGAATAAAGTGTATTTGGTACAAAAGTGTATGTAAATGGAAGACTTGGAACATTTAATTGAAAAATGAAAAAAAA ACTTGAGAGGCATGACATCAAGGAAAATAAAGCAGAGAGAAAATTAAGGGAAATTCTACAATACTCCTTAATGTGCTAGCATCTGACGTAAATTAACATG AAGTATAGTGAAATAGTTATACTAAATTACTAATGATCACTATTCCGGACGGTTTGACTAGTTAGAACCCATATGATATCTCTTTGGATTAGATGTGTTA CTCAAGTATTATAATATTGGCTTGGATATAACATGATCCATCCATCTTTGAATTGTCTTCATGTTCTCATTTATGTTTGGTTTGGTCTGCCTTCTTCAAA CTCAATTTTTAGCTCCACCCTTGATCACAATGTTATAGTTGTAACTAAGTATTATCACGTTTTATTTTACATCACCTGAGGGTACTGATAACATCAAGGG TATATAATATTATCCTAGAGAACATACAAGATAGATTTAACCATTAGATGCTCCATAAACTTTGCCGTAAGCTCTGCTGTTATAGATTTTACCTTTTACA TGCAAAGCATTTAATGGAATCATGCAGTTATTTGCTTTACACATGATTTTTATGAGTAGTCGGTCCAATAAGTTAATCACTAAACTAATATCCATATGGC TGAACGAAGAAGCATAATGTTTGATACTGCTACATCCTTGATAACATCTCGTACCTTAAAATAAAGCTACTTCATGCATTCAAGGAACATTCTTATCATA AAATTCATGTAGGTTTTTCATTACTGATTCTTCATGTGTATATATACATATCATAATTAAGTATGTGTGTGAATATGACCAAATGAGTTGGAATTCCCTG CACTGTAAATGGTGTGGTTTATGTGATGAGCCACACAGCTTATATATAGATTGCAAGTTGGAATATTGGGTATGGCCTTGGTTCAAGGTTCATAGAAAAT ACATTTTGGATGGCCAGCTCAATATGATGGGACAATAGATCCTTAGGATTATCTAAATTCCTTTGAGGCATCAATTTTGTTCTATGGAGCTTCCGACCTC AATATGTGCGGAGCTTTCCCCTTGACGCTAAAGGGTACCACCCTCCAATGCGCCACACATCAAGAGACAAATTCTATCACCAGTTTCACATTCACGGCTA GTAAGGAACAACCCCGCTCCTACACTTTGTCCGCAATAGAACACTGGACCAACAAATCCGTCAGAGACTACTTGGACTGATTCAGCGAAGCTAGTATGCA GACAAATGTCAAGATGAGGATCCTGATAGAGTGCAACATGCGCCACCACAACTGACTGAGGCCTCTAGCTAAGGCAATAGTGTGCCAAACACGAGCACTG ACAGTGACCCACATGAAGCAAGTGATATGCCAATCCAGGATTCTAGTCGAGTCACATATTCGCCAAGGTTGGCACAAGACCAAGGCACATATATGCCAAG ACAAGGCACTAAACATTGGTCATACATGGTCAAAACTCCAAATGGCACAGGACATGGTACAAGCCAAAGAAGTCAGGTCACTGGACAAAGCACGGGCCAG ATATGACATGCAAGCCAAAACTTGGCATTTTCAGTTGAAGGCTTGACACGGTTATGCGAAGGCTTGGCACAGCCAGACCAAGGTGCATATCAGCATTCAA TTCCCAACCAAGACCTGCTGCAGGATACAGTCGGATTGCTTATGATGCAAGCAACCTTTATAATTAAATATTAATCATTAATTACTTGTATTTGGATGAT TCAATAATAACCATTGGATTAGAAGGGAGTTAGTTTTAGTTAGTTGGAGATTTATATAAAATGAGATAGTTAATTATTTTGTATTCATTGATTCAAATTC ATCAATAAATGTTTCTCTTGAGGTTTTA BLAST |
Tissue | pods |
Gene name | LI_gene_177254; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344949
Blastp | Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic from Cucumis with 81.79% of identity |
---|---|
Blastx | Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic from Cucumis with 81.79% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (101218189) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439720.1) |
Pfam | NmrA-like family (PF05368.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |