Id Trinity | TRINITY_DN50445_c2_g1_i1 |
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Name Transcript | Ll_transcript_346336 |
Sequence | AAATAATTAAATAAAAACCATAATGAATTCATCATAATTAGCCTTCTCTTCTTTTTCTCTGTGCTTTTGGGCTTCAATTGTGGATGGGAAGTGGCCAGAA AGCACAGATTTCTTATTTCAGTGGAACTCAGCTTTTCGCTCCTAATTCGGTGGGAATTTCTGTATGTGGGAGAAATTTGAGGAAGAATGAACTTGGTGGT GTCATATTCGGGACCAAGAACGCTACTATTAAAGAATGTCTATCTAAACAACTCTTTGGCTTACCGGCTCAGCACTTCTCTTATGTGAAGAATATTGATC CTGGATTGCCTCTGTTTCTGTTCAACTATAGTGACCGGAAGCTTCATGGAATTTTCGAGGCGGCTAGCAATGGGAAAATGTTTATAGACCCTTATGGATG GACTGAGGGTGGTTCTGTGAGAACACAATATCCTGCTCAGGTTCAAGTTCATGTGCGGCTTAAGTGCCAGCCACTGTCGGAAGATAAATTTAGACCCATA ATTCAAGACAACTACTACACTCAAAAACATTTCTGGTTCGAACTAGACCACATACAAACTCAAAAGCTGAATGCTTTACTAGCATCCTTAGCAATAGCCC CTGGTAATTCTGCCCCCCAGAATATACCAAGGTGGACGGTTGTATCACGGTCTCGTCCATTACATGAAACTCCGAGGGAAGGTGAAGCATCTAAGACGGC TGAAACAGAGATAGAGCAATCTGCTCACTCAAGTATGAGATCAGATTCATCAGAAAATGATTCTTCTTTAGATAGAGACATCCAGCCATTGGATAGTCAT GCAGCTATGAAGGAAGTAAAACAGGATCACAAGGACATCATGTTTATGAAACTAAAGGAATTGACTCTTAATCTTGAAACTCAAAAACCGTCTTTGCCAG ATGATATAAGCAATATTCCTGATGTGAATAATACGTCCTCTGTGGAAAAGGGTAACTTGGCGGCGCCAACTAGTTTAGAGAAGAAGGAAGAGAGTCCTAC CACCCCATCTGAGACTGAGTGTCAATACGACATAAGCCAGTTGGTGCATGAGGTCAAAGAACTGACAGCATTCAACAAAATGCAAATCGAGAGGAATTGT TACCTGGAGCAGAAGATGATGGAGGCAGGAATGGAAATCCAGTATCTAAAAGATCGTTGTACACGGCTAGAATATGCATATAATGTTCCTTCGACATATG TCGAGAAGACATTTATCAAGTCATCTGCTGAGCTGCATTTAAACCCCAAAGATTCAATATACTTAATAGGAGGCTTTAATGGAGAATCATGGTTCAAAAC TATGGATATGTACTCTACTTCCCAGAAAGTCGTCAAATCTCTCAAGCCTATGAACTCAGTTCACTCGTATACTTCAGTTGTGCAGTTGAATGGTGAGATT TTTGTTATTGGTGGTGGTAATGGACATGTTTGGTGTGAAACAGTTGAATCGTACTGTTCATTTCGTGACAACTGGACCCTATGGCCTTCTTTGAACCAGA AGAAAGGAAGCTTGTCCGGAGCTGCTGTGGACGGCAAAATATTTGTCGTTGGCGGTGGTAATGGTATTGAATTCCTTTCAGATGTTGAGATGCTTGACTT AGACATTGGACGGTGGATCCCTACGCGATCAATGCTTGAAAAGAGATTTTCTCTGGCTGCAGTGGCACTCAACGGTGCACTTTATGCTACTGGTGGATAT AATGGAAATGAATACTTGAACTCTGCTGAAAGGTTCGATCCCAGGGAGCATTCTTGGACTAAAATTCCGGACATGAATTCGAAGAGGGGCTGTCACTCTT TAGTTGTTTTAAATGAAAAATTGTATGCTCTAGGTGGCTTTGACGGAAACGGAATGCTTTCAAGTGTTGAAGTGTTTGATCCTCGTCTCGGCGCATGGAT GATGGGGGAACCAATGATTCATGCTAGAGGGTATTCTGCTGCTGCAATTGTCAAGGAGTCCATTTATGTGATTGGGGGACTTAAACTTGGTGAGACAATT GTAGATACGGTTGAAAAATATAAGGAAGGTGAGGGATGGCAGCAAAGTTTCACAGCATCAAATGTTAGAAAGTGTTTCTGGTCTGCTATAGCATGCAGTG ATGAGTGAAGGTGAAGGTAGAATTATTCAAACTATATAGACAGAAGTAAATGAATAAAATGGTCATGTAGAGGCTCTTAATCATAGCTATTGCTATTTGT GAAGGTAGAATTATTCAAACTATATAGACAGAAGTAAATGAATAAAATGGTCATGTAGAGGCTCTTAATCATAGCTATTGCTATTTGTGAAG BLAST |
Tissue | pods |
Gene name | LI_gene_177258; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346336
Blastp | Kelch-like protein 17 from Rattus with 33.78% of identity |
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Blastx | Kelch-like protein 17 from Rattus with 33.78% of identity |
Eggnog | kelch-like(ENOG410XNX8) |
Kegg | Link to kegg annotations (246757) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019412938.1) |
Pfam | Development and cell death domain (PF10539.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |