Ll_transcript_346366

• Id Trinity: TRINITY_DN50445_c2_g9_i1
• Name Transcript: Ll_transcript_346366
• Sequence: GTTGCATGGTCCTATGTAATACCTGAATACCAACGGATGTTGGTTCAAGTGGTACATGCTTGATTCCTCTTAAGCAAGGTCTCGGATTCGAGTCTTGTCG ATGGAGAAAATGTCCGTTGGGAGAGTTAGCCCCACATACCTGTTGATGTCCCCGGCTCAGACAAGATTGCCTCAAGTGCGAGAATACCTGTGAGAAACCA AAAAAACTCAAAATCCCAAAATATCCTTTCCTTCTTTCATTCATTATCCACATCCAACTCTTCTCTCCAATCTCAAATCATCTTTATCACCCAACTTCTC CAATGTAAATCCTCAAACCATAGTCCCAAATATTGTTTTTACCTCTTAATTCATGTTTATCGTTTATTATTTATTTACGTATATTTCATAGCGAGTCGAT CTAGTAGTATTAAAGCTTGATTGTTGTTGTATATATATTTTATGACTACATCACAAAGTGAATTTTTTTTATGAAAATTGCTGCATTTACCAGTAGTGGT GATTGGATTTATTATTGAGCCAAATGAATATGCTTTCAAACTTTTCTTCATTGATCCACAAATCCTTATTACCATTCAAAATCAAACCCCAAATTCATTT ATGTTCCTTTTCATTTTTATCAACTATCACAGATAACCCAATGTCATATATTATCACTAAATGCATTGCTCTTTTGCAAATGTGTGCATCTTCCAAATAC AAACTTAGGCAAATTCATGCATTTTCTATTAGGCATGGTGTCCCATTGAATAACCCTGACATGGGTAAACATCTTATATATACTATTGTATCCCTTTCTG CACCTATGTCTTATGCATACCATGTGTTTGCCATAATGCATAACCCAAATGTGTTCACCTGGAACACCATGATTAGGGGCTATGCTGAAACCGAAAACCC CGTTCCTGCATTTCATTTGTACCGCGAAATGGTAGTGTCTGGTGTTGAACCTGACACCCACACTTACCCTTTTCTTCTCAAGGCTGTTGCTAAGTCGTTG AATGTTAGAGAAGGGGAAACTATACATTCAGTTACTATAAGAAATGGGTTTGAGTCTTTGCTGTTTGTTCAGAATAGTTTGCTTCATATGTATGCTACTT TTGGTCATACAGAAAGTGCACACCAGATGTTTGAGTCAATGAAAGAAAGAGATCTCGTCGCTTGGAACTCTGTCATTAATGGGTTTGCTCTTAATGGCAG GCCAAATGAGGCTTTGACTTTGTTTAGGAAAATGAGTGTGGAGGGTGTGGAGCCTGATGGGTTCACCATTGTTAGCTTGTTATCTGCTTGTGCTGAACTT GGAGCTCTAGAGTTAGGGTGCAGGGTTCATGTGTATGCGTTCAAAGTAGGTCTGAGAGAGAACTTACATGTTAATAATTCTTTGTTGGACTTTTATGCGA AGTGTGGGAGCATTAGAGAGGCACAACAAGTATTCAGTGAGATGGGAGAAAGGAACACGATTTCTTGGACGTCTTTGATTGTTGGCTTGGCTATTAATGG CTTTGGCGAGGAAGCACTGAAGTTTTTCAAAGAGATGGAAAGGCAAAAGATACTGCCTAGTGAGATCACTTTTGTTGGTGTCCTGTATGCTTGTAGCCAT TGCGGGATGTTGGATGAAGGGTTCAATTACTTTAGAAGGATGAAAGAGGAATATGGTATCATGCCGAGGATAGAACATTATGGTTGCATGGTGGATTTAT TGGGTAGGGCAGGTTTGGTGAAACAAGCATACAAATATATTCAGGACATGTCATTGCAGCCAAATGCAGTTATTTGGAGGACCTTGTTGGGGGCTTGTAC AATACATGGACATTTGAGTTTGGGAGAGATAGCAAGATCCCACCTTTTAAAGTTGGAGCCTAAACATAGTGGGGATTATGTGCTTCTCTCAAATCTCTAT GCCTCTGAACAGCGTTGGTCAGATGTACAATCAGTGAGGAGGTCAATGCTGAATGATGGTGTTAAGAAAACCCCTGGCTATAGTTTTGTCGAGTTAGGCA ACCGTGTTTATGAATTTACTATAGGTGATAGATCTCATCCTCAAAGTCAGGATGTATATGCACTACTGGAGAAGATCACAGAATTATTGAAGTTAGAAGG TTATGTGCCTCATACTGCAAATGTGCTTGCAGACATAGAGGAAGAGGAGAAGGAACAAGCTTTGTCTTATCACAGTGAAAAGGTTGCAATTGCTTTTATG CTCTTGAATACAGCACCAGGGACCCCAATCAGGGTTATGAAGAATTTAAGAGTTTGTGCAGATTGTCATATGGCTATCAAACTGATATCAAAGGTTTATG ATAGAGAGATCGTTATCAGGGACCGTAGTCGGTTCCACCATTTTAGAAGTGGTTCATGTTCCTGTAAAGATTACTGGTAAATGGTAATATATATATTTAT CAGGATTTGGTAATGGCATCTAAAATACTGTATTGATTTTGAGGTAGGATGTGATTCTTCAAAGAGAGACACAACCGAATACGTTGCAATCATTCTGCAG TGTGCATAGTAAACAAATTCAAGCCTCTTCCTCCTAACATGGCTAAGTTGGCGAGGGTGTGCACAAGTATGGATTACCTGCAATTTCAAAAAGTAAACTT ATGAATATATGGGAGTTCTGTTCATGATCCCACCATTCAATTTATTGAAATGCAGTTCAAAAATAAATTAATGCTACACAAAATACATTCATGAGAGATA ATCTCACAAGTCTTAGAAAAACAGCAGAGGACCCTGATTCGTGTATCCGCAAACTATGGAGTTTTGTTGGTAATTTGGATAGAGAATGCTATTTTGATCA ATTAGCCTGACATTTGTGCTTCAGTAAATATATGCCCTTTGTTTTTGAAGCGCGTGAATTTCAGTTGGCCGAGCTAAGGCCGTTGTCACATGATACACAA TAGTCTTTGGTACGGGTACGGGTATGGGGTATGCAACTTACTACCCATCAAATACATGGTACACCGGAGAGTATCTTGGTGGGTACCCTCTATTTGTTAT ATGTTATTGATCTACTAGTTAAACTTAAATGAACATTTGTCCATGTTTTAAAAGATTAAAAATAAGTAACTAAATAAGCC
• Tissue: pods
• Gene name: LI_gene_177266;
• Additional information: details;

Expression of Ll_transcript_346366

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.4
• PS2: 0.4
• PS3: 0.6
• PW1: 0.4
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346366

• Blastp: Pentatricopeptide repeat-containing protein At4g21065 from Arabidopsis with 66.67% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g21065 from Arabidopsis with 66.67% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G21065)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430900.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;