| Id Trinity | TRINITY_DN50448_c1_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_345271 |
| Sequence | TGTCAAACAAGGGCTCCATCTGAATTATGAAAGTAAAAAGACATTAAAGTTGGAAACGTTTAAAAGGGTAACCCCATAGTGAATGCATCTACTACTACTC CTTATCTTCTTCAAATACATACATAGGTTTGGATATTTTATATGGCTCAATATGGTCCAAGAGTGGTGGTGCCTATAGACTTGAAGAAGAAACCGTGGGA GCAAAAATTTCCCCTTCACAACCGGTGGCATCCAGATATACCCACAGTTGAAGTAGTAACAGCTGGTGAAGTTTTTAGAATTGAGATGGTGGATTTCAGT GGAGGTGGTATCACCAAGAATTACACTGCTCATGATATCAAACATGTAGATCTCTCAATTGTCCATTATCTTAGTGGGCCAATCAGAGTTATGGATAGTG ATGGCATCCTAGCCAAGCCTGGTGATTTGCTTGTTGTTGAAATATGCAACTTGGGTCCTCTCCCAGGTGATGAATGGGGTTATACAGGAACATTTGATAG AGAAAATGGAGGTGGTTTCTTGACAGACCATTTTCCTTGTGCCACAAAAGCTATATGGCACTTTGAGGGCATATATGCTCATTCACCTCAAATACCAGGA GTGCGATTTCCAGGTTTAACACACCCAGGGATAATTGGAACTGCACCATCAATGGAACTCTTGAATATATGGAATGAAAGGGAGAAAGATGTTGAAGAAA ATGGTATTGAATCTTTTAAGTTGTGTGAGGTTTTGCATTCACGACCTTTGGCAAACTTACCATCTACAAACGGTTGTCACCTTGGAAAGATTCAAAAAGG CACTGCTGAATGGGAGAAGATAGCAAAAGAAGCAGCAAGAACAATACCAGGAAGAGAAAATGGTGGAAATTGTGACATAAAAAATCTCAGTAGAGGTTCA AAGATATACCTTCCAGTTTTTGTAGAAGGAGCAAATCTCAGCACTGGTGACATGCACTTTTCACAGGGTGATGGCGAAGTCTCATTTTGTGGTGCAATAG AGATGAGTGGTTTTCTGGAACTTAAGTTAGTATTATAACTTCAATAACTCAAAATTTCAACCAACTTATTCATACACTTGAATCAAACAGAAAAAAAAAA CTTGCATACTACAACACTTAAAGTTTATATTGTTTTTGATGCCATTAGGTGTGAAATTATAAGGGGTGGAATGAAAGAGTACCTTACACCAATGGGACCT ACTCCTCTTCATGTCAACCCAATATTTGAGATTGGCCCTGTTGAACCAAGATTCTCAGAGTGGTTGGTTTTTGAAGGTATTAGTGTTGATGAAAGTGGGA GGCAACATTACCTAGATGCAAGTGTTGCTTACAAGAGAGCAGTACTCAATGCCATTGACTACCTCTCTAAGTTTGGGTACTCCAAAGAACAGGTGTACCT CTTACTCTCTTGTTGTCCTTGTGAAGGAAGAATATCTGGAATAGTGGATGCTCCCAATGCTGTTGCAACCCTGGCCATCCCAATAGCCATATTTGACCAG GACATCCGTCCTAAAAATAACAAGGTTCCAGTTGGACCCCGCCTTATAAAGAAACCAGATGTCCTCAAATGCACTTATGATGGAAACCTACCTATTACAA GGAACCCTAGTGCTACACAATGACATGGACAAGTAAGAATGCAGAATGAACTTACAATGGATTTTATGGGACAAAGGCTTTTAAATAATGGAGAAGTTTG TGATATATTCACAGTTGTAGAAAAATATGGGACAATATGCTTCTTCTCACTGGAAAAATGTTTGCTTTCATGTATGCTCAATTATTCAAATATACTATTA AGGAATAAGGAATTCAAACTAGCACAGCACTACTACTATTTCGAAGAGCTAGAATCATCTTTATTAATCAATAGAGAAATATTATGTAAAACAAAGTAAA AATCACAGTGAAATAATAATTGTATCATTTCATTTATAACTGCAGCCACATTTTTATCTTTAAAATAAATATATAAATAGTATTTCTCTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_177278; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345271
| Blastp | Putative formamidase C869.04 from Schizosaccharomyces with 54.61% of identity |
|---|---|
| Blastx | Formamidase from Methylophilus with 45.09% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPAC869.04) |
| CantataDB | Link to cantataDB annotations (CNT0000428) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424281.1) |
| Pfam | Acetamidase/Formamidase family (PF03069.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |