| Id Trinity | TRINITY_DN50451_c1_g6_i1 |
|---|---|
| Name Transcript | Ll_transcript_346973 |
| Sequence | GTCCATATTGTCTTAAAGAAGAAACACACACTACCACGTCATCGATCCAAGTGATCCTCTTCACAATGAATCCTCAATCGTGGGATCATCATCCATTTAG TGAGTCCCAGCCGTCCATATTGTCTTAAAGAAGAACAAGGGAGGGTTGGAATAAGAGGAAGAAGTTTTATTTCTTTTGAATTTTTAATTTATTTATCTTC CTTTAAATTCAATCCTCGGATCATTGCAAGTATCACTCATATTAAACACTTCACTGTAAAATCTTGAAGCTTATCTTTGCTAAAGTTTGCATTTTTAAGC TTTTTGAGCTTCTTCATTACCTACAACTTCAATGGCCACTGAAGAGGTTAATAAACCTCCATCACTTCCTCCATACCCTGAGTTGATAATGAAAGCAGTG GAAGCACTGAATGACCAGAATGGATCTAACAAATCAGCAATAGCAAGTTACATAGAATCAACCTATGGTGAGTTGCCAGCAGGGCACACAGCACTTCTCA CTCATCACCTCCACAGGATGAAAGAGAGTGGAGAGCTTGTGTTCTTGAAGAACAACTACATGAAACCTGACCCTACTGCCCCACCAAAGAGAGGTCGTGG TAGGCCACCAAAACCAAAGGCTCATGTGCCCCCTGGCACTGTTGTGTCCCCACCAAGGCCAAGAGGTCGACCTCCAAAGGACCCTAATGCCCCACCAAGT GCTAAGGTTTCAAGTGGAAGTGGTAGGCCAAGAGGAAGGCCTAAGAAGATTGCTCGGTCTGTGCTGCCGCTGCCATCGGCGGAAGCTGCACCCGCCGGTA GTGGAAGGCCGAGAGGTAGGCCTCCTAAGGTGAAGCCTCAATTGACAGAAGTTAGTGTTGAATCATAGGATGTTTGTTTTGTTGGCTAATGTTGTGTGAT GATAAGTACTATTGTAGGAGTGTGTGGGCTTAAGATTTTATGTCCACTGTAGTTGCTTTGTAAAATTGTGTAGTTGTAGCTAGTTTGTGAGACCGTTTGT TTTCTGTTCTACTTACCAAACAAGACAATGACTTGAGCTGATAATGATTTAGTTCCTAATGTTGTTATTATCTAGTATCAAGTTCTAACCTAAAAACTCA TAATCTAGAAAAGGGTGTTGTTTCAAACTTTGATGTGATTCATTGTCTTTGTTTGTATTAGGTGATTAATTAGGCTATCTAATGTTGACCCTTTTATTTA AAACAAAAGATTTGGTCAGTGTATGAAGCACTGTAGCTAAGATAGAGAAAGAAGGAGCTGAAGGAGTAATAATTTTGACTATGTTGTGCTAAAAAATTTG GACATCACCTTATGCATAACATCGTACCTTAAGATATACATTCCTCGTACGGATAAGGTACATCATTCAAGCTGTTCCTAGATGTGAACTACGTGTAATT TTCTGTTTCTTTTTTCCTCACAGATATAGACAAATTTGTAGCATATGCAATATGGTGTAGCATCTCTATCTTCTATTTCATGTTGATAGAGATTGGTAGG TTGTGACATTTGAAATTACTAAATTAGCAGTGTGGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_177309; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346973
| Blastp | HMG-Y-related protein A from Soja with 73.22% of identity |
|---|---|
| Blastx | HMG-Y-related protein A from Soja with 70.72% of identity |
| Eggnog | HMG-Y-related protein(ENOG410YQM8) |
| Kegg | Link to kegg annotations (548080) |
| CantataDB | Link to cantataDB annotations (CNT0002659) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455774.1) |
| Pfam | linker histone H1 and H5 family (PF00538.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |