Ll_transcript_345401

• Id Trinity: TRINITY_DN50453_c0_g1_i1
• Name Transcript: Ll_transcript_345401
• Sequence: CCCATATTTAAGGTGTACCGGAATCGGGAGATGATATTTCATACCCTATTAGCTGGAATTCTATTGAACGTGTATAAATTTTATATAGATATTATTTACA CTAAATTATGTAATATAACGACATTTTTTATTTATATGATATTGTTCTCTCTTTCCTCATTCCTCTTCCAAAACCTTCAGATCACTTGCGAGGATGGGGT GGGAAAACATTTTCAGAAGGCGTGTTAGAGTATTCACAATGGCCATAGTAATATACCTCGATTATAAGGCTGTACAACAGCGGGAGAAATGGACTAGCAA ATCTGGACAAGCTGCATTGTGGGAGAAGGCTCATGAGCGTAATGCTAAGCGTGTTCTAAATTTGATATTAGAGATGGAAGGCTTGTGGGTGAAACTTGGA CAATATATGTCAACACGTGCAGATGTGCTTCCCCCAGCTTATACACGTCTTTTGAAGCTTTTACAGGACTCCCTTCCTCCTCGCCCTCTGGAAGAGGTTT ATGGAACAATACAGAAAGAATTGGGGAAGTCAATGGACGAGATATTTTCTGATTTTGTCAATGAACCTTTAGCAACAGCATCGATAGCGCAAGTCCATCG TGCAACTTTGCTCAATGGGCAGGAAGTGGTTGTTAAAGTTCAACATGATGGTATCAAGGCAGTCATACTAGAGGACTTAAAAAATGCTAAGTCAATTGTT GACTGGATAGCATGGGCCGAGCCGCAATATAACTTTAATCCTATGATTGATGAATGGTGCAAAGAAGCTCCTAAAGAACTTGACTTCAACCATGAAGCTG AAAACACTAGAACAGTGGCTAAAAATCTTGGCTGCAGAAACCAATCAGATAGAAATATGAATGCCAATCGAGTGGATGTCTTGATCCCAGATGTAATTCA GTCTACAGAAAAAGTTCTTGTTTTAGAGTACATGGATGGCATTCGGTTGAATGATTTAGAATCACTAGAAGCTTTTGGAGTTGATAAACAAAAGATCGTT GAGGAGATTACTCGTGCTTATGCTCACCAAATATATGTTGATGGGTTTTTCAATGGTGATCCTCATCCAGGAAATTTTCTTGTGAGCAAGGAATTTCCTC ATCGTCCCATTTTACTTGACTTTGGGCTTACAAAGAAAGTATCAAGCACCTTTAAGCAAGCACTTGCAAAGATGTTTTTGTCTTCTGTTGAGGGGGATTT CGTGGCCCTTCTGTCTGCGTTAGCAGAAATGGGGCTCAAGTTGCGTGTAGACTTACCAGAGCAGACAATGGAGGTAGTAACTGTATTCTTTCGTGCTACA ACACAAGCAAATGAATCCTATAAAACAAGGAAGTCTTTGGCCGATCAACGAACCAAAAATATGAAGGCTATACAGGAGAAAATGAATCTCGACCAAAAAG AAATGAAACGTTTTAATCCTGTTGATGCTTTTCCTGGTGATATTGTAATATTTGGAAGGGTTCTTAATCTTCTAAGAGGGCTTTCTGCTACCATGAATGT GCACATAGTATATATGGACATAATGAGGCCATTTGCAGAATCAGTTTTGAGGGGGTACATTGACAAAGGGCCATCAGTAAATGATAGATGGATTTTTGAT TCACCAGTCCATTCTGATGTAGAAGCCAAGCTTAGGCAACTTTTGATTGAGCTGGGAAATAATGATAAAGTACTTGGAATCCAGGTATGTGCCTACAAAG ATGGAGAGGTCATTATTGACACTGCTGCTGGAGTGCTTGGTAAATATGATCCTCGTCCGGTCAAGCCTGATAGCCTTTTCCCAGTGTTCTCTGTTACAAA GGGTATCACTTCAGGAATGATGCATTGGTTGGTGGATAATGGAAAACTAAATCTTGCGGAGAATGTTGCAAATATTTGGCCGGGATTTGGGTCGAACGGG AAGGATTTCATAAAGGTTCATCATGTGCTCAACCATACATCTGGTTTGCACAATGCAATGACAGACATAACTCGAGAAAACCCTCTACTTATGTCTGATT GGGATGAATGTTTAAATCACATTTGTAAGTCAGTACCTGAGACAGAACCAGGCAAGGAGCAGTTTTATCATTATTTGTCATTTGGCTGGTTGTGCGGTGG AATCATTGAGCATGCATCTGGAAAGAAATTTCAGGAGATCCTTGAAGAAGCGATAGTCCGCCCTCTCCATATTGAAGGAGAGATGTATGTAGGGATTCCC CCAGGGGTGGAATCACGCCTTGCAGCTCTAACTGTAGATACAGATGATTTAAGGAAGCTTGCGGGGCTCACCGGTCGTCCTGACCTTCCCTCCTCCTTTC AGCCACAGCAAATTGCTCAACTTGCAACCACACTGCCCCCTCTTTTCAATACATTGCATGCTCGCCGTGCCATCATACCAGCTGCTAATGGACATTTATC TGCCAGGGCACTTGCGCGCTACTATGCAGCCCTAGCCGATGGCGGCAAGATACCTCCACCTCATTCTTCTGCTTCAGAGCCGGTACTTGGAAGTCATCCC CACATCCCCAAACTATTTTCTTCTCAAAAAGCCCCCAAAAATAGGAAATGTTTTGGACGGAAAGAGGTAATCTTGCCTTCAATAGATAATAACCCTACAG GTTATGAAAAAGTCTCTAGCGTCGAAGATTTCCAGGATAATAGTGAAGGCTCCAGTACCAGCAAAGATAGTAATCCTCGAACCCGTGCTGAGGGCAAGTT CTTTAAGAATCCTAAGGTTATCGACGAATTCTTGGGTGTCGGAGAGTATGAGAATTTAACATTGCCAAATGGGGGTTTCGGGCTAGGGTTTAAGAGGTTT AGTTCTAAGGATGGATCATCCATTGCCTTTGGTCATTCTGGAATGGGTGGATCTACTGGGTTTTGTGATGTCACACACAAGTTTTCTATTGCTATAACAC TGAACAAGATGTCCTTTGGAGGTGTTACTGGAAAAATTGTTCAACTTGTTTGTTCAGAGTTGAATATTCCTGTGCCAGATGATTTCCTAAGATTTGCAAA TGAGCAGAGTGGATCTGATGAGCAATTAAATATGGCTAGGCCTCTGATTAATTAAGAAATGATCACTCCTTTTATAATTATAGATACAATAATTTATTAT ATTGGTTTGGTGTTGATTGGTGAGCCTCAACGTAATGATAATGTTGTTGCTTAGTAACCAAGAGGTAATGAGTTTAAATTCCGAAAATAGTATAGGGTAA GATTATGTTCATTCACGTTCCACTAGGTAGGAGTCTTGTACATTGAACCACTGGTTTTGTTGTGGATCTCTTTTATCTCAAATCTTAGCATTACATGAAT TTGCTTCCTTCTGTATAATGTATTCAATTATGTACACAAAGTTGAACTTTAACCATTGAAATCTTGGTCCTTATCTAATTTCAGGTTCCACCATTTTATT TTCAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_177316;
• Additional information: details;

Expression of Ll_transcript_345401

FPKM

• PAB: 19.5
• PNAB: 12.7
• PS1: 18.6
• PS2: 13.1
• PS3: 18.3
• PW1: 14.3
• PW2: 17.9
• PW3: 19.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345401

• Blastp: Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic from Arabidopsis with 32.93% of identity
• Blastx: Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic from Arabidopsis with 34.56% of identity
• Eggnog: Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)(COG0661)
• Kegg: Link to kegg annotations (AT5G64940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458334.1)
• Pfam: ABC1 family (PF03109.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;