Id Trinity | TRINITY_DN50453_c0_g1_i13 |
---|---|
Name Transcript | Ll_transcript_345416 |
Sequence | CCCATATTTAAGGTGTACCGGAATCGGGAGATGATATTTCATACCCTATTAGCTGGAATTCTATTGAACGTGTATAAATTTTATATAGATATTATTTACA CTAAATTATGTAATATAACGACATTTTTTATTTATATGATATTGTTCTCTCTTTCCTCATTCCTCTTCCAAAACCTTCAGATCACTTGCGAGGATGGGGT GGGAAAACATTTTCAGAAGGCGTGTTAGAGTATTCACAATGGCCATAGTAATATACCTCGATTATAAGGCTGTACAACAGCGGGAGAAATGGACTAGCAA ATCTGGACAAGCTGCATTGTGGGAGAAGGCTCATGAGCGTAATGCTAAGCGTGTTCTAAATTTGATATTAGAGATGGAAGGCTTGTGGGTGAAACTTGGA CAATATATGTCAACACGTGCAGATGTGCTTCCCCCAGCTTATACACGTCTTTTGAAGCTTTTACAGGACTCCCTTCCTCCTCGCCCTCTGGAAGAGGTTT ATGGAACAATACAGAAAGAATTGGGGAAGTCAATGGACGAGATATTTTCTGATTTTGTCAATGAACCTTTAGCAACAGCATCGATAGCGCAAGTCCATCG TGCAACTTTGCTCAATGGGCAGGAAGTGGTTGTTAAAGTTCAACATGATGGTATCAAGGCAGTCATACTAGAGGTTTGCTTGTTTTATCCTTTGGGATGT ATGGATATAAAGGTAAATGGAAGTCTTCAAATGGTTTTTGGGCTTATATTTTTTTCAGGACTTAAAAAATGCTAAGTCAATTGTTGACTGGATAGCATGG GCCGAGCCGCAATATAACTTTAATCCTATGATTGATGAATGGTGCAAAGAAGCTCCTAAAGAACTTGACTTCAACCATGAAGCTGAAAACACTAGAACAG TGGCTAAAAATCTTGGCTGCAGAAACCAATCAGATAGAAATATGAATGCCAATCGAGTGGATGTCTTGATCCCAGATGTAATTCAGTCTACAGAAAAAGT TCTTGTTTTAGAGTACATGGATGGCATTCGGTTGAATGATTTAGAATCACTAGAAGCTTTTGGAGTTGATAAACAAAAGATCGTTGAGGAGATTACTCGT GCTTATGCTCACCAAATATATGTTGATGGGTTTTTCAATGGTGATCCTCATCCAGGAAATTTTCTTGTGAGCAAGGAATTTCCTCATCGTCCCATTTTAC TTGACTTTGGGCTTACAAAGAAAGTATCAAGCACCTTTAAGCAAGCACTTGCAAAGATGTTTTTGTCTTCTGTTGAGGGGGATTTCGTGGCCCTTCTGTC TGCGTTAGCAGAAATGGGGCTCAAGTTGCGTGTAGACTTACCAGAGCAGACAATGGAGGTAGTAACTGTATTCTTTCGTGCTACAACACAAGCAAATGAA TCCTATAAAACAAGGAAGTCTTTGGCCGATCAACGAACCAAAAATATGAAGGCTATACAGGAGAAAATGAATCTCGACCAAAAAGAAATGAAACGTTTTA ATCCTGTTGATGCTTTTCCTGGTGATATTGTAATATTTGGAAGGGTTCTTAATCTTCTAAGAGGGCTTTCTGCTACCATGAATGTGCACATAGTATATAT GGACATAATGAGGCCATTTGCAGAATCAGTTTTGAGGGGGTACATTGACAAAGGGCCATCAGTAAATGATAGATGGATTTTTGATTCACCAGTCCATTCT GATGTAGAAGCCAAGCTTAGGCAACTTTTGATTGAGCTGGGAAATAATGATAAAGTACTTGGAATCCAGGTATGTGCCTACAAAGATGGAGAGGTCATTA TTGACACTGCTGCTGGAGTGCTTGGTAAATATGATCCTCGTCCGGTCAAGCCTGATAGCCTTTTCCCAGTGTTCTCTGTTACAAAGGGTATCACTTCAGG AATGATGCATTGGTTGGTGGATAATGGAAAACTAAATCTTGCGGAGAATGTTGCAAATATTTGGCCGGGATTTGGGTCGAACGGGAAGGATTTCATAAAG GTTCATCATGTGCTCAACCATACATCTGGTTTGCACAATGCAATGACAGACATAACTCGAGAAAACCCTCTACTTATGTCTGATTGGGATGAATGTTTAA ATCACATTTGTAAGTCAGTACCTGAGACAGAACCAGGCAAGGAGCAGTTTTATCATTATTTGTCATTTGGCTGGTTGTGCGGTGGAATCATTGAGCATGC ATCTGGAAAGAAATTTCAGGAGATCCTTGAAGAAGCGATAGTCCGCCCTCTCCATATTGAAGGAGAGATGTATGTAGGGATTCCCCCAGGGGTGGAATCA CGCCTTGCAGCTCTAACTGTAGATACAGATGATTTAAGGAAGCTTGCGGGGCTCACCGGTCGTCCTGACCTTCCCTCCTCCTTTCAGCCACAGCAAATTG CTCAACTTGCAACCACACTGCCCCCTCTTTTCAATACATTGCATGCTCGCCGTGCCATCATACCAGCTGCTAATGGACATTTATCTGCCAGGGCACTTGC GCGCTACTATGCAGCCCTAGCCGATGGCGGCAAGATACCTCCACCTCATTCTTCTGCTTCAGAGCCGGTACTTGGAAGTCATCCCCACATCCCCAAACTA TTTTCTTCTCAAAAAGCCCCCAAAAATAGGAAATGTTTTGGACGGAAAGAGGTAATCTTGCCTTCAATAGATAATAACCCTACAGGTTATGAAAAAGTCT CTAGCGTCGAAGATTTCCAGGATAATAGTGAAGGCTCCAGTACCAGCAAAGATAGTAATCCTCGAACCCGTGCTGAGGGCAAGTTCTTTAAGAATCCTAA GGTTATCGACGAATTCTTGGGTGTCGGAGAGTATGAGAATTTAACATTGCCAAATGGGGGTTTCGGGCTAGGGTTTAAGAGGTTTAGTTCTAAGGATGGA TCATCCATTGCCTTTGGTCATTCTGGAATGGGTGGATCTACTGGGTTTTGTGATGTCACACACAAGTTTTCTATTGCTATAACACTGAACAAGATGTCCT TTGGAGGTGTTACTGGAAAAATTGTTCAACTTGTTTGTTCAGAGTTGAATATTCCTGTGCCAGATGATTTCCTAAGATTTGCAAATGAGCAGAGTGGATC TGATGAGCAATTAAATATGGCTAGGCCTCTGATTAATTAAGAAATGATCACTCCTTTTATAATTATAGATACAATAATTTATTATATTGGTTTGGTGTTG ATTGGTGAGCCTCAACGTAATGATAATGTTGTTGCTTAGTAACCAAGAGGTAATGAGTTTAAATTCCGAAAATAGTATAGGGTAAGATTATGTTCATTCA CGTTCCACTAGGTAGGAGTCTTGTACATTGAACCACTGGTTTTGTTGTGGATCTCTTTTATCTCAAATCTTAGCATTACATGAATTTGCTTCCTTCTGTA TAATGTATTCAATTATGTACACAAAGTTGAACTTTAACCATTGAAATCTTGGTCCTTATCTAATTTCAGGTTCCACCATTTTATTTTCAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_177316; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345416
Blastp | Beta-lactamase domain-containing protein 2 from Caenorhabditis with 26.69% of identity |
---|---|
Blastx | Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic from Arabidopsis with 28.72% of identity |
Eggnog | Beta-lactamase(COG1680) |
Kegg | Link to kegg annotations (CELE_ZK945.1) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458334.1) |
Pfam | ABC1 family (PF03109.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |