Ll_transcript_344758

• Id Trinity: TRINITY_DN50462_c1_g1_i10
• Name Transcript: Ll_transcript_344758
• Sequence: ATTTTGTCTAATATAAATATGTCCCCTGCTCTTTTCCCTGGCGCTCACTTCTTTCAAGTTTCATTTCTGTTCTTGTGGCGCGTGCTCTTCACCTTCACAC TCTCATAACCGCTACACTACTCAAATCTCCGCCGCAAAATGACGGTGTTCTCCGCCAAGCAGGTATTCCCGGTGGACTACGAGCCTCACATCTCACAGCT CCTTCTACAAGCTTCTCACTCCGGCGATCTCGCCTCCGTATTCCACTGCATTTCCCATCCCTCCGTCGACGTCAACTTTTCCGGCGCCGTCACGTTGAAA ACTAGGAATACCGATCTTGTCCTTTTCCATGAAGCTGCTACACAAGTTTGCGTACAGTTTCAGGAATTCGTCACTGACGTCACGCCTCTGTTTCTTGCGG TTCATGCCGGAAACGTGAACCTTGTTAGGAAGTTACTGAGTATTGGAGCTGATGTAAACCAAAAGCTCTTCAGAGGCTTTGCAACAACGGTAGCAGTGAG AGAAGGCCACCTTAATATTCTTGAGATCTTACTTAAAGCAGGAGCGTCGCAGCCAGCATGTGAGGAAGCTCTATTGGAGGCAAGCTGTCATGGACAAGCA GGGTGTGCAGAACTACTCATGAGCTCGGATTTGATCCGGCCTCATATCACAGTACATGCTCTCATGACCGCATGCTGTAGGGGGTTTGTAGATGTGATTG AGACACTCATAAAGTGTGGTGTTGATGCAAATGCGACAGACCGTGTACTTTTACAGTCACTTAAGCCTTCTCTCCACACAAATGTGGATTGTACTCCTCT TGTTGCAGCTGTAATTCATAGGCAGGTCCCTGTTGTTGGTTTGCTACTTCAGAGCGGTGCTAGGATAGACTCTGAAGTGAGGCTTGGAGCCTGGTCGTGG GATATTTCAACTGGTGAAGAGCTTCGTGTGGGTGCTGGGTTAGGAGAACCTTATGGCATCACCTGGTGTGCAGTTGAGTACTTCGAAAGAAGTGGCGCTA TACTGCGCTTGCTTTTGCAACATGCATCCTCCAATAGTCCTAACTGTGGGAGAACCCTTCTACACCATGCCATCCTCTGTGGCAATGTCGAGGCTGTCAG GACACTCTTAGAATGTGGTGCTGATCCAGAATCCCCAGTCAAAACAACCAGCAAGACCGAGTTCCTTCCTATACACATGGCATCTCGTCTTGGCTTACCA TTAATTATTCAATGCCTTATTGATTTTGGTTGTGATTTGAACTCTATAACAAACTCTGGTGACACTTCTGTGATGATCTGCGCAAAATATAAACAAGAGG AGTGCCTCAAAGTACCAGCAAAGGCTGGTGCTGATTTTGGTTTGGTGAATATTGCTGGTCAATCAAAATCCAGCAATACTTCTACATTTCTCCCCTTAAT GTTCGTAGCTCAGGCTGGAGATACCGAAGCATTGAAAACTGTGATTGAATCTGGAGAATTTGATCTTGACTATCAAGATGATAGTGGCTTCTGTGCTGTT GTGCTTACTGCTTTAAAGGGTCACGTGGAATCATTTCGGTTGCTAAACAATGTGACACATTATCATTGGTTTCTTTAGAATTATGTACTTATACATCTTG GACTTTGGATTTGAGTTAGTTAGAATGATCATTATGGTGGTTGAGTTTTGAACTATTGTTGTTTGTTTAGTCGAAACTACAACAAATTACATCTTTGAAT TTGCTCGATTGTTCCATCTAATGCTACAAGCTTAGAACGTGTTGGATGGAATGAATGGAGGTTTTATATGTATGCTACATTTAACATTGAAATTTCATGG ATGCATTTGATGAGATTTTTTTTATTCATCTTCAAGTTTGTTTACATTGTCTATATGAACTTAGCATTAAATTGATGAGTTTGGATTTGATAGGTTAGTT AGAATGATCATTATGATGGTTTTGAGTTTTGAACTA
• Tissue: pods
• Gene name: LI_gene_177369;
• Additional information: details;

Expression of Ll_transcript_344758

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.2
• PS3: 0.2
• PW1: 0
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344758

• Blastp: Ankyrin-3 from Rattus with 27.42% of identity
• Blastx: Ankyrin-3 from Rattus with 27.42% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (361833)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458879.1)
• Pfam: Ankyrin repeat (PF00023.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;