| Id Trinity | TRINITY_DN50462_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_344737 |
| Sequence | ATTTTGTCTAATATAAATATGTCCCCTGCTCTTTTCCCTGGCGCTCACTTCTTTCAAGTTTCATTTCTGTTCTTGTGGCGCGTGCTCTTCACCTTCACAC TCTCATAACCGCTACACTACTCAAATCTCCGCCGCAAAATGACGGTGTTCTCCGCCAAGCAGGTATTCCCGGTGGACTACGAGCCTCACATCTCACAGCT CCTTCTACAAGCTTCTCACTCCGGCGATCTCGCCTCCGTATTCCACTGCATTTCCCATCCCTCCGTCGACGTCAACTTTTCCGGCGCCGTCACGTTGAAA ACTAGGAATACCGATCTTGTCCTTTTCCATGAAGCTGCTACACAAGTTTGCGTACAGTTTCAGGAATTCGTCACTGACGTCACGCCTCTGTTTCTTGCGG TTCATGCCGGAAACGTGAACCTTGTTAGGAAGTTACTGAGTATTGGAGCTGATGTAAACCAAAAGCTCTTCAGAGGCTTTGCAACAACGGTAGCAGTGAG AGAAGGCCACCTTAATATTCTTGAGATCTTACTTAAAGCAGGAGCGTCGCAGCCAGCATGTGAGGAAGCTCTATTGGAGGCAAGCTGTCATGGACAAGCA GGGTGTGCAGAACTACTCATGAGCTCGGATTTGATCCGGCCTCATATCACAGTACATGCTCTCATGACCGCATGCTGTAGGGGGTTTGTAGATGTGATTG AGACACTCATAAAGTGTGGTGTTGATGCAAATGCGACAGACCGTGTACTTTTACAGTCACTTAAGCCTTCTCTCCACACAAATGTGGATTGTACTCCTCT TGTTGCAGCTGTAATTCATAGGCAGGTCCCTGTTGTTGGTTTGCTACTTCAGAGCGGTGCTAGGATAGACTCTGAAGTGAGGCTTGGAGCCTGGTCGTGG GATATTTCAACTGGTGAAGAGCTTCGTGTGGGTGCTGGGTTAGGAGAACCTTATGGCATCACCTGGTGTGCAGTTGAGTACTTCGAAAGAAGTGGCGCTA TACTGCGCTTGCTTTTGCAACATGCATCCTCCAATAGTCCTAACTGTGGGAGAACCCTTCTACACCATGCCATCCTCTGTGGCAATGTCGAGGCTGTCAG GACACTCTTAGAATGTGGTGCTGATCCAGAATCCCCAGTCAAAACAACCAGCAAGACCGAGTTCCTTCCTATACACATGGCATCTCGTCTTGGCTTACCA TTAATTATTCAATGCCTTATTGATTTTGGTTGTGATTTGAACTCTATAACAAACTCTGGTGACACTTCTGTGATGATCTGCGCAAAATATAAACAAGAGG AGTGCCTCAAAGTACTAGCAAAGGCTGGTGCTGATTTTGGTTTGGTGAATATTGCTGGTCAATCTGCAAGTTCAATCGCAAAGTCAAACAAATGGTCACT TGGTTTTCAGAAAGCAGTGCTGGATACAATTAGAGAAGGTAAGATACCAAAATCCAGCAATACTTCTGTATTTCTCCCCTTAATGTTCGTAGCTCAGGCT GGAGATACCGAAGCATTGAAAACTGTGATTGAATCTGGAGAATTTGATCTTGACTATCAAGATGATAGTGGCTTCTCTGCTGTTATGCTTACTGCTTTAA AGGGTCATGTGGAATCATTTCGGTTGCTTGTATATGCCGGAGCCGATGTAAATCTGTGCAATAAATCTGGTGAAACAGCAGTTACCCTGTCTGAATTAAA CCAAAACTCCGATATGTTTGAAAAGGTCATGCTTGAATTTGCTCTTGAAAGGGATAATCGCAACTCAAGCGGCTTCTATGCGTTACATTGTGCAGCTCGT CGTGGCGACTTAGATGCTGTTAAATTGCTCACTGGCAAAGGTTATGATGTGAATGTCCCTGATGGGGAAGGCTACACTCCGCTCATGTTAGCAGCAAGGG AAGGCCATGGTTCCATTTGCGAGCATCTAATTTCATATGGTGCTCATTGCAATGCTAAAAACGCTAGAGGAGAAACTGCACTTCTACTTGCAAGGAAATT GGCAGCAGGAAACAACAATGCAGAAGCTGTTATCCTCGATGAACTTGCTCGTAAACTGGTATTTCACGGTGCCTATGTTCAGAAGCACACCAAAGGCGGG AAAGGCACTCCACACCAGAAACAAATAAGGATGTTAGACCCTTCAGGTGTGCTATGTTGGGGGAAATCAAGCCGGAGAAATGTGATGTGTTGTGAGGCAG AGTTAGGACCAAGCTCAACATTACGTAGAAATAGGTACAAGAAAGGTGATGCCGATGAACCCGGAATGTTTAGAGTGCTTACTACCAAGAACAAGGAAGT GCATTTTGTATGTGATGGAGGATTAGAAGTTGCTGAGCTTTGGGTGAGAGGTATAAAACTTGTAACCAAAGATGCTATTTTTGGGAAGCAGAGAATCAAT GTGAGTAAGCATTAGTGTCTATAATATGCTAATAGGAGAGATGTATAGATGTCTGAACTTTGGAATCATACTTCATCTTGAAGTATTTTAGATGGTTTTT ATTGTTAAGATTTTGATCTCTTGATAGTTGTACATTCTTTTTTATAGGGTTAAGGAAAATTAAAATAATTTGTTGCTCTTAAATTAATATGGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_177369; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344737
| Blastp | Ankyrin-3 from Rattus with 27.71% of identity |
|---|---|
| Blastx | Ankyrin-3 from Rattus with 27.71% of identity |
| Eggnog | Ankyrin Repeat(COG0666) |
| Kegg | Link to kegg annotations (361833) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458879.1) |
| Pfam | Ankyrin repeat (PF00023.29) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |