| Id Trinity | TRINITY_DN50463_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_345025 |
| Sequence | CTTTGAAGCTATTATTACTCATGATGTGTCGGTAATAATTGATACATTTATATGATTTTTTATTCAAAATTAAAAATAATCCTAAGATTAAAAATTTAAA AATTAATGAAATCAGAAATGAAAAAGCTTAGCATAATCATTCATCACCCTTTTCTTATTCCCATACAGATCTTCAGCTTAGCTTTGAGTTTCTCAATCAC CACCTTTATTTTTTTCATAAAAAAATATATTTTTTCATGAACAAAATTGGTTTATTATTTTACTTGATCTGTTAGAACCAAGAAAGAGGTGATTTTGGAA AATCTTGGATTTATGAAGAGAAAAAATTAGTGGGGTTTGATTGGATCAAGGAAAAGACTCAAACTTTGCAGATTTTCAGTTTCTGGAGTGCGTGGATCTT GTAAAAGCTGTTGATTTGATTGAGCAAGGAAAAAAAGTTACTTTTTTTTCAGCTCAAGGTGGTTTTCAACTTTTTCCTCTGCCATTGGAGAAGAAAGAAG TTTAAAGGTACTTAGCTTTGGTAACCAAACATTAAAGCCCTTGTAGCAGTTCATAAGGTTGTTGAAAGTGGAAGAGGTTTTCATTGCTTCAAGTTTGATT CTAGGATATCAAAATGGGGGTTCAGTGCTCCACTCTCATTCCATGTTGTGTCAATTCTCAAGTTAAGGCTTCCGTTGTTGAAACTGCAGATGCTGAAAAT GAGGATAGAAGTGAGGTCAGTGACTCGCCTATATTCCGAGTATTTACACTAGAGCAACTTAAGAATGCAACATCTGGTTTTGCGGCTGAGAATATTGTAT CTGAACATGGAGAGAAGGCTCCAAATGTTGTTTTTAAAGGCAAGTTAGAGAGTCAAATGAGGATTGCTGTTAAGCGGTTTAATAAAAATGCTTGGCCCGA CTCTAGGCAGTTTTTGGAGGAAGCGAGATCAGTTGGTCAGCTTCGTAACCAAAGATTGGCAAATTTGCTTGGTTGTTGTTGCGAAGGAGATGAGAGGTTG CTTGTGGCCGAATACATGCCCAATGAAACACTTGCAAAACATCTTTTCCATTGGGAAGCACAACCTATGAAGTGGGCAATGCGACTAAGAGTTGTTCTAC ATCTTGCACAAGCCCTAGAGTACTGCACAAGCAAAGGGCGTGCCCTCTACCATGACCTTAATGCATACAGAATTTTATTCGACGAGGATGGTAATCCTAG GCTTTCAAGTTTTGGCCTTATGAAAAATAGCAGAGATGGGAAAAGTTATAGCACAAATTTGGCATTTACCCCTCCAGAATATCTCAGAACCGGGAGAGTG ACACCAGAAAGCGTAATATATAGCTTTGGTACTCTTTTGCTTGATCTTCTCAGTGGGAAGCATATTCCTCCAAGTCATGCTCTTGATTTGATCCGAGATA GAAATCTTCAAATGCTGACAGATTCTTGTTTGGAGGGACAATTTTCTGATGATGATGGAACTGAGTTGGTACGCTTGGCATCTCGATGTTTACAGTATGA ACCTAGAGAACGGCCTAATCCAAAGTCATTGGTGGCTGCTTTGACTCCTCTTCAGAAGGAAACAGAGGTTGGTTTATTATCATTATTTACTGTGATTGAT GGCTTAATTCAAGTTTATATTGCTCCTCATTTCTGTCTAGGTTCCTTCACATGTCTTGATGGGTATCCCAAATAGTGCTTCCTTTGCTTCGCTATCTCCA CTTGGTGAAGCGTGCTCAAGAAAGGACTTGACTGCCATACATGCAGTTCTCGAAAATCTTGGCTATAAAGATGATGAAGGAGTGACAAATGAGCTATCAT TCCATATGTGGACTGATCAAATGCAGGACACATTAAATTGTAAGAAAAGGGGGGATGTTGCTTTCCAGCAGAAAGATTTTAGACTGGCGCTCATGTGCTA CACACAGGTAGATTTCTAGCGTTGACAAGTTCGACTAATCTAAAATTGGCTTGCCATTTTTTGTATTCCAAACACTCAGCAGGGGGGCTCACGTCTGATT AGCTAGTTGGTGGAGCAATAGCTTACCAAGGCGATGATCAGTAGTTGGTCCGAGAGGATGATCAGCCACACTGGGACCGAGACACGGCCCAGACTCCTAC GGGAGGCAGCAGTGGGGAATTTTCTGCAATGGGCGAAAGCCTGATGGAGCAATGCGAGCAAATTATATTCAATAAAATGTCACAACACATATATCTCCAG TGCACATTTTTTGTTGGAATTGGTACTGACAGATTCTACAGTCCTAGTGGATGCGAGGTTTTCATAGTTGTGAATAATGCTTTAGATTTCTAACTAGAGA CGCATCAATCAATGTCTGTGTTGTTACTTGATAATAAAGTAATGGTCAAGAATAAAGTATTTTACTCTGATTTAGAGTCTATGAAGGAATCATTTTGGTA TTATCACCTCTGGTCTCTGGATCCATCTTATTGGGTTATTCAGTCTTAACATTGAATTTGGTTTCTAATGTCAGTTTAGTTAATGAGAATTCATTGATTT TTACGCAGTTCATCGATGCTGGAACAATGGTTTCTCCAACGGTCTATGTGCGGCGCAGTTTGTGTCATCTCATTAGTGACATGCCTCCGGAAGCACTGAA TGATGCAATGCAAGCCCAAGTCATTTCCCCTGTATGGCACATTGCATCATATCTTCAATCTGTTGCCCTTGCTGGACTTGGGATGGAGAATGAAGCACAA GCAGCACTGAAAGATGGAACAACTCTGGAATCGAAGTGGAAAGGAAGCTCTAAACAGAAGTGAAGACTTTGTACAGAGACTTTGCATGATCACCACCACC TCAGAACATTGATTAAAAAGTTCATATTTGATACACAATAGAACCCCTTACAAAAAGTTCCTTGTGTTTGAAGATTTCTAAAAAAACAATGATTGGATGA GTGTTTGCAACACCCCTCCCACTTTTTATTGGGTTGGCTAGGATGTTCATTCAGTTACATGATTTGATTGAGCATGAATCCGAACTTGGCAAAGTTTTCT TCTTTTCATTTATAAAAGGGTTGAAAATGTGAAAATGTGAAAAGTTAAAAGTGAAAAGCTTTATTGTTCCTAGCTGTGTGCTGTGTTTGTCATGCCATGC AAAATTCTTTTTCTACTTCAATTCTAGTTGTGACAATAAATGGAGTAAACTGTGATATTTGTAAGCATGCATTTCCAATATCTGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_177378; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345025
| Blastp | Probable serine/threonine-protein kinase At5g41260 from Arabidopsis with 75.15% of identity |
|---|---|
| Blastx | Probable serine/threonine-protein kinase At5g41260 from Arabidopsis with 75.15% of identity |
| Eggnog | serine threonine-protein kinase(ENOG410XQTV) |
| Kegg | Link to kegg annotations (AT5G41260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456338.1) |
| Pfam | Protein tyrosine kinase (PF07714.16) |
| Rfam | SSU_rRNA_archaea (RF01959) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |