Ll_transcript_345841

Id TrinityTRINITY_DN50464_c2_g1_i10
Name TranscriptLl_transcript_345841
SequenceGTCTGAGGAAGCATTGAAGCAACTTTCCAGTGACGCTCTCATCTCATCAAACCTATCATCATATCTCAACTACTTCCCTTTCACTTCACTCCTCTTTCTA TTTCCCAAACAGATCTTCACTTCATTCATTGTTACCACTTCTCACGCCATTCCCATTTTTCCATCGACCCACATCATCATCTGCTAAATCAAACCCCATT TCTCAAAAGGGTATCTTTTTCATTCTCTAATGATGGTGGATACCTCAACTATTGGGCGGTTCCACCACCAAAAACTCGAATTTAAGCGATGGGTTCCAAT ATTATTAACCTCCTACAAGACCCTTTTCACGGTTCTATGGATCGCTGCATTCGCCTCGATTTTCGTGTGGCAGAGGAACATAGTCGGTGGTTTCTTAGTG TTCGGTCGTGCCACGGCGGCGAGGCCAATACCGAAGCTGAGACCGGTGGCTTTCAATTTGACGGATTTCGGAGGGGTTGGTGATGGGGTTACTCTAAATA CTGAAGCATTTGAGAGGGCAATTTCGGCAATCTCTAAATTAGGGAAGAAAGGTGGTGGCCAGCTTAATGTTCCTCCGGGACGGTGGCTTACGGCGCCGTT TAATCTTACCAGTCATATGACTCTATTTCTAGCTGAAGATGCTGTTATACTTGGACTTGATGATGAAAAGTATTGGCCACTAATGCCTCCATTGCCTTCA TATGGGTATGGGAGGGAGCATCCTGGGCCTCGATACGGCAGTTTGATTCATGGTCAAAATCTTAAAGATATTGTGATAACAGGTGAGAATTATTTTATCC TGCTTCGCATGTATGAAACAGTGTAAAACTTGTCATTTTCATAACAAAGGTCTTGGTATTGAATGCCATTCTAAGTACATTCAAGTCTTTGTCTTTCAAT ACTATGTAACTGTTGTATTTTGAGGAAAAAAGAAGGAAAATAAGCAGATTTCATTTCACTTTTTTAGTCCAAAAACAAGAAAATAATATAGTCCGATACC CCAGCTCTTTTTATAGTTGAGATATCAATATTCCAAAGGCTGAGTTAATGCTGAACAATAAATTGAATAGTTCCTTATTGAGTTTTTTTACTGATTTGAA TTATTTGCAACAAGAAAAAGATAGGAGATAAACCAGAAAATTAGTGACACACTGTCACTTTGTTTTGTCCTTTTATTAAAAGTGAAGGGTTGCTTTACAA GGTCGTATAACTGTACAGTGGACAAAAATACTATAAGTCTATATGGAATTCTGATACCCAAAGCTATATATGTACATTGAAAACAATAAGGTGATAGATT AATATGGATGTGTAGCACGATTCAACTGTTTCTCAATATGTGTCGAGAAACAAGTTTGTTTAGTATTTACTACTTACTAACATGTGTCATATGCTACCCC CCTAGACCTCATTAAAGGGAAAAGGCTTGGCATATCATATGACATTCTTTGTTTAAATCAACCCTCATGAAACTTGGACTGGCTGATTAAACAATCACCA AGAGCACAGTAGATTTTGGTGGCGGGTGGCCACGAGCATGTGAGTGACTAAGGTTTGTTTTGTTTGGATTTTAACCTGGTTCTCGCTGGATGAAAAATAA AGGGTAGCATGGTGCCCTGGTAAGGAGAAATCTATGACCTCTGTGAAAGCAGTTCTCTAGTTAGGAGGCAACATTACCTTGATAAACAAAACAAGATAAG CTATCACAACACAATGACTCATGCACACCAGTCAGAAAAAAGTAACAGAAACATCTTCCAAAACATAAAGCCATTAGCCCATGACCAGATTATCTGTGCA GTGCTTGATTCCTAAATTTCTGATTCCATACATTGTCATAACTGACAGGGCATAACGGTACCATAAATGGACAGGGACAAGCATGGTGGAAAAAACATCG CCAGAAGCGTCTCAACCATACAAGGGGGCCACTTGTTCAGATCATGTGGTCTAGTGACATTGTGATCACTAATATTACTCTGCGTGACTCTCCTTTTTGG ACACTTCATCCGTATGACTGCAAGAACATTACAATAAAACATGTTACGATACTGGCTCCTGTATCCAAAGCTCCAAATACAGATGGCATAGATCCTGACT CTTGTGAGGATATGTTGATAGAGGATTGTTACATAAGTACGGGAGATGATGCAATTGCGATAAAAAGTGGCTGGGATCAATATGGAATTGCGTATGGAAG GCCTTCCAAGAATATAATGATCCGAAACCTTGTTGTTCGCTCCATGGTCAGTGCTGGCGTGTCAATAGGCAGTGAGATGTCTGGTGGGGTATTCAATGTC ACGGTGGAGAACCTTCTTGTATGGGACTCTAGACGTGCGGTGAGGATTAAGACTGCTCCTGGACGTGGTGGATATGTGCGCCAAATAACTTACCGGAATC TAACATTTGAAAATGTCCGTGTCGGAATTGTTATGAAGACAGATTATAATGAACACCCTGATGATGGGTATGACCGTACAGCACTTCCTATACTCAAAGA CATAAGCTTTATCACCGTCCATGGCCACGGAGTCCGTGTGCCAGTACGTATTCATGGCAGTGAAGAGATTCCTGTGAGAAATGTGACTTTTCAGGATATG TCAATTGGGCTAACCTACAAGAAGAAGCACATATTTCAGTGTGCCTTTGTTCAAGGCCGCGTAATCGGGGCCATTTTTCCTGCTCCCTGTGAGAACCTTG ATCGATACAATGAGCAAGGACAGCTGGTCAAGCATTCTGCATCACATAATGTAACAGATATAGATTATGATTTTTGAGCTGTTCTATTAATCAGGCCTCA GTTTATGTCTGTATCTGTAATAGATCATTTTTTGTGAGGTTTGTATCAGTCTAGTCATACTTTCTTTGCCATTTCATTTCCTTAGTCTGTTTTATAGTTT TCTTTAAGTGGAGTTGTATTGTATATATGGAAAAATTTCAATTCTAACGCAAGTTTACTAGATGACAGAAATATTTTATCTCAATGCTTTTACTATTGAA GATTTATGCAAGTAAGAGAATTACTGAAGTCACTGATTTTGTTACTTTATTAAATTCTCACCCCCACTTTTACCACTTACACACTCTTT BLAST
Tissuepods
Gene nameLI_gene_177386; 
Additional informationdetails; 

Expression of Ll_transcript_345841

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_345841
BlastpProbable polygalacturonase from Vitis with 41.79% of identity
BlastxProbable polygalacturonase from Vitis with 42.05% of identity
EggnogGlycoside hydrolase family 28(COG5434)
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019443391.1)
PfamGlycosyl hydrolases family 28 (PF00295.16)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;