Ll_transcript_345828

• Id Trinity: TRINITY_DN50464_c2_g1_i3
• Name Transcript: Ll_transcript_345828
• Sequence: GTCTGAGGAAGCATTGAAGCAACTTTCCAGTGACGCTCTCATCTCATCAAACCTATCATCATATCTCAACTACTTCCCTTTCACTTCACTCCTCTTTCTA TTTCCCAAACAGATCTTCACTTCATTCATTGTTACCACTTCTCACGCCATTCCCATTTTTCCATCGACCCACATCATCATCTGCTAAATCAAACCCCATT TCTCAAAAGGGTATCTTTTTCATTCTCTAATGATGGTGGATACCTCAACTATTGGGCGGTTCCACCACCAAAAACTCGAATTTAAGCGATGGGTTCCAAT ATTATTAACCTCCTACAAGACCCTTTTCACGGTTCTATGGATCGCTGCATTCGCCTCGATTTTCGTGTGGCAGAGGAACATAGTCGGTGGTTTCTTAGTG TTCGGTCGTGCCACGGCGGCGAGGCCAATACCGAAGCTGAGACCGGTGGCTTTCAATTTGACGGATTTCGGAGGGGTTGGTGATGGGGTTACTCTAAATA CTGAAGCATTTGAGAGGGCAATTTCGGCAATCTCTAAATTAGGGAAGAAAGGTGGTGGCCAGCTTAATGTTCCTCCGGGACGGTGGCTTACGGCGCCGTT TAATCTTACCAGTCATATGACTCTATTTCTAGCTGAAGATGCTGTTATACTTGGACTTGATGATGAAAAGTATTGGCCACTAATGCCTCCATTGCCTTCA TATGGGTATGGGAGGGAGCATCCTGGGCCTCGATACGGCAGTTTGATTCATGGTCAAAATCTTAAAGATATTGTGATAACAGGGCATAACGGCACCATAA ATGGACAGGGACAAGCGTGGTGGAAAAAATATCGCCAGAAGCGTCTCAACCACACAAGGGGGCCACTTGTTCAGATCATGTGGTCTAGTGACATTGTGAT CACTAATATTACACTGCGTGACTCTCCCTTTTGGACACTTCATCCATATGACTGCAAGAACATTACAATAAAACATGTTACAATACTGGCTCCTGTATTC GAAGCTCCAAATACTGATGGCATAGATCCTGACTCTTGTGAGGATATGTTGATAGAGGATTGTTACATAAGTACGGGAGATGATGCAATTGCGATAAAAA GTGGCTGGGATCAGTATGGAATTGCTTATGGAAGGCCTTCCAAGAATATAATGATCCGAAACCTTGTTGTTCGCTCCATGGTCAGTGCTGGCGTGTCAAT AGGCAGTGAGATGTCTGGTGGGGTATTCAATGTCACTGTGGAGAATCTTCTTGTATGGGACTCTAGACGCGCAGTGAGGATTAAGACTGCTCCTGGGCGT GGTGGATATGTGCGTCAAATAACTTACCGGAATCTAACATTTGAGAATGTTCGTGTTGGAATTGTCATGAAGACAGATTACAATGAACACCCTGATAATG GGTATGACCCTACAGCACTTCCAATACTGAAAGACATAAGCTTCACTTCCGTCCATGGCCAGGGAGTCCGTGTGCCGGTACGTATTCATGGTAGTGAAGA GATTCCAGTGAGGAATGTGACTTTTCAGGATATGTCAGTTGGGCTAACCTACAAGAAGAAACATATCTTTCAGTGTGCGTTTGTTCAAGGCCGCGTAATA GGGACCATCTTTCCTGCTCCCTGTGTGAACCTTGATCGTTACAACGAGCAAGGACAGCTTGTCGAGCATTCTGCATTGCAGAATGTAACGGATATAGATT ATGATTTTTGAGATATGTTCTTCTATTATTCAGGCCTCAGTTAATGTCTCTATCTGTAATAGATTATTTTTTGTGGGGGTTGGATCATTCAACTCATTCT TTCTTTGTAATTTCATTTTCTTACTCCATTCCATAGCTTTCTTAAGTGGAATTGTATTGTATATAAGGAAAACTTTCAGTGCTTGCGGAAGTTTACTAGG TGAGAAATGGATTTTACTTAGATATCATTCTTCAGGATTTGTTGCAAGATAGTGCTCAAGTCTGAGGTTGGTTTTGTTAAAGGTGGTCCAATGCACGAGA CTTTTTCTAGTAGAACATGAGAATGATGGATGTATGCAATCTACTTTAACAAAGGAACCATCTATGAACTCATGATAGTTTATAAAATTTCACCCCCATT TTTACCACTCC
• Tissue: pods
• Gene name: LI_gene_177386;
• Additional information: details;

Expression of Ll_transcript_345828

FPKM

• PAB: 9
• PNAB: 11.7
• PS1: 10.2
• PS2: 7.2
• PS3: 9.9
• PW1: 7.3
• PW2: 11.4
• PW3: 15.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345828

• Blastp: Probable polygalacturonase from Vitis with 46.63% of identity
• Blastx: Probable polygalacturonase from Vitis with 46.63% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455271.1)
• Pfam: Glycosyl hydrolases family 28 (PF00295.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;