Ll_transcript_345829

• Id Trinity: TRINITY_DN50464_c2_g1_i4
• Name Transcript: Ll_transcript_345829
• Sequence: TGCTGAAGTTAATGGTGAAAATAATTTGAATAGTTCCTTATTGAATAATTTTGTCTGCATTGATTTGAACTGTTGTAACAAAAGAAGAGTTAGGAGATAA ACCAGAGAATGAGCTGAAAATTAGTAACCAACCGTCACTGTGTTCTGTCCTTTTATTAAATGTGAAGGGTGACTTTACCAGCTCATACAGCTGTAGAAAG AATAAAAATACTATAAAGAAATACATACACACAAACTATATATACTATAATTCTATAAAGAAATACACATTTACCATCCTCACACCCCACTAGGTGAGAG CCCTGTATAACGGGCCACCCTTCTCTTGTTGAAATTATAGGATTTTGGTGGAGGTAGAAAAAGGAATACTCAAAATGGTGAATTTTGTATTGCTATTATT GTGAATGATATGATGTGATACAAAAGACATAACACTAATACTAATATTAAACTCCTAATTAAATAAGAAAACAAATCATAAAAAATAAGATACGGTAATT TCAATTCTAAGAGATCTTCTAATACATTATAGACTAACCTAAGATATCATCATGATAATATCGGGTATCCTCTCAATATTCAAATATCCTCCAAGAGATA ATATAAGATATTACATAAGATATTGCGAGATATTTCATATATTCTAACAGTTCTCACTAGATGAACAGTAAAGGTTAGCACAGTGCACTGGGAGAAATCT ATGACCAGTGAGAAAGCAGTCCACTAATTAGGAGGCAACATTACTATGATAAACAAGACAAAATAGGCGATCAGAGCACAGTTCTCTCTCTCTTTTATTT CTATATGTGTGGTGCTTAATTCCTGCATTTATCTGATTCAACCTATTGTCATAACTGTCAGGGCATAACGGCACCATAAATGGACAGGGACAAGCGTGGT GGAAAAAATATCGCCAGAAGCGTCTCAACCACACAAGGGGGCCACTTGTTCAGATCATGTGGTCTAGTGACATTGTGATCACTAATATTACACTGCGTGA CTCTCCCTTTTGGACACTTCATCCATATGACTGCAAGAACATTACAATAAAACATGTTACAATACTGGCTCCTGTATTCGAAGCTCCAAATACTGATGGC ATAGATCCTGACTCTTGTGAGGATATGTTGATAGAGGATTGTTACATAAGTACGGGAGATGATGCAATTGCGATAAAAAGTGGCTGGGATCAGTATGGAA TTGCTTATGGAAGGCCTTCCAAGAATATAATGATCCGAAACCTTGTTGTTCGCTCCATGGTCAGTGCTGGCGTGTCAATAGGCAGTGAGATGTCTGGTGG GGTATTCAATGTCACTGTGGAGAATCTTCTTGTATGGGACTCTAGACGCGCAGTGAGGATTAAGACTGCTCCTGGGCGTGGTGGATATGTGCGTCAAATA ACTTACCGGAATCTAACATTTGAGAATGTTCGTGTTGGAATTGTCATGAAGACAGATTACAATGAACACCCTGATAATGGGTATGACCCTACAGCACTTC CAATACTGAAAGACATAAGCTTCACTTCCGTCCATGGCCAGGGAGTCCGTGTGCCGGTACGTATTCATGGTAGTGAAGAGATTCCAGTGAGGAATGTGAC TTTTCAGGATATGTCAGTTGGGCTAACCTACAAGAAGAAACATATCTTTCAGTGTGCGTTTGTTCAAGGCCGCGTAATAGGGACCATCTTTCCTGCTCCC TGTGTGAACCTTGATCGTTACAACGAGCAAGGACAGCTTGTCGAGCATTCTGCATTGCAGAATGTAACGGATATAGATTATGATTTTTGAGATATGTTCT TCTATTATTCAGGCCTCAGTTAATGTCTCTATCTGTAATAGATTATTTTTTGTGGGGGTTGGATCATTCAACTCATTCTTTCTTTGTAATTTCATTTTCT TACTCCATTCCATAGCTTTCTTAAGTGGAATTGTATTGTATATAAGGAAAACTTTCAGTGCTTGCGGAAGTTTACTAGGTGAGAAATGGATTTTACTTAG ATATCATTCTTCAGGATTTGTTGCAAGATAGTGCTCAAGTCTGAGGTTGGTTTTGTTAAAGGTGGTCCAATGCACGAGACTTTTTCTAGTAGAACATGAG AATGATGGATGTATGCAATCTACTTTAACAAAGGAACCATCTATGAACTCATGATAGTTTATAAAATTTCACCCCCATTTTTACCACTCC
• Tissue: pods
• Gene name: LI_gene_177386;
• Additional information: details;

Expression of Ll_transcript_345829

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.1
• PS2: 0.2
• PS3: 0.2
• PW1: 0.1
• PW2: 0.1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345829

• Blastp: Probable polygalacturonase from Vitis with 42.54% of identity
• Blastx: Probable polygalacturonase from Vitis with 42.38% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0002332)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455271.1)
• Pfam: Glycosyl hydrolases family 28 (PF00295.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;