Ll_transcript_344343

• Id Trinity: TRINITY_DN50465_c1_g1_i4
• Name Transcript: Ll_transcript_344343
• Sequence: CCTTGTGTAAGAGCAAGAGCAGCTACTTATTATTAATAACTAATAACACACAGCATTCAAAATGTTTCATCAATCTCTTCAAACTTCAAAGTTCAGGAAT TTGGAGAAATTTTTACTCTTTGTGGGTTTTATTTGTGTCTCCAATATCCCCCTGAAGTTCTATAAGGTGTTTGATGTTAGGATTTTCATTGGGTCAAACA AAGAAGATATGATTACTAAGGTTTTGAAGGTTTCTCTCATTCTGGTTCTCCTTGTAATAGTATATGTGGAAGCTCATTCTGGGAATCACAATCACAATAG TCTCAATAAGAATGGATCTTCTCTTGCTGCAATAAGGTTTCCTGATCATCCAAGTTACAGTGATGTGTCCTCTTCTGGAGACAGTGACTGTGGCTTCTCA AATTCACAACAATTTGGACTTTCTGATGATGATGATGATGATGATAATGGTGGTAAAAATGAAGCTTTTTTAGCAGCTAAACCACACAAGCAGCCATTGA AACTCCATTTGAAGCACAGGCCAGTGAGCAAAGATATTGAGCCTGAAAAATCTGTGATTGATTTCACAGCAAAGGACTTGACCAGAATTCAAAGCCTTCA TAGAAGGGTCATAGAAAAGAAGAACCAAAACAATATTTCAAGGTTGCAAAAATCAAAGGAACAATCAAAGCAGCAATACAAGCCGGTGGTTGCTCCAGCA GCTTCACCTGAATCTTTGGGGAGTGGATATTCCAGCCAGCTTGTGGCAACATTGGAATCTGGGGTAAGTCTTGGCTCTGGGGAGTATTTCATTGATGTGT TTGTAGGTACACCTCCAAAGCATTTTTCTCTGATACTTGATACTGGTAGTGACCTTAATTGGATTCAATGTGTTCCTTGTTTAGCTTGTTTTGAGCAAAG TGGACCATATTATGATCCTAAAGATTCTGAATCTTTTAAGAATATAAGCTGTCATGATCCTCGGTGCCAATTGGTTTCGTCGCCGGATCCACCTAATGAC CTTTGCAAGGTTGAGAATCAGAGTTGTCCTTATTTCTACTGGTATGGAGATAGTTCCAATACAACAGGTGATTTTGCAGTGGAGACTTTTACGGTTAATC TTACCTCGCCGACCGGGAAGTCGGAACTCAAGCAAGTTGAGAATATGATGTTTGGTTGTGGTCATTGGAATAGAGGTTTATTTCATGGAGCTGCTGGATT GCTTGGATTGGGGAGAGGGCCATTATCATTTGCTTCTCAGCTACAATCTCTTTATGGTCATTCCTTTTCTTATTGTCTTGTGGATAGAAATAGCAACACA AGTGTCAGCAGCAAACTGATATTTGGTGAGGACAAGGAGCTTCTCAACCATTCCAATTTGAACTTCACTTCTTTTGTTGGAGGTGTGAAAGAGAATTCAG TTGATACATTTTACTATGTGCAGATAAAATCTGTCATGGTTGGTGGTGAGGTACTAGAGATACCTGAGGAGACTTGGCATTTATCAGAAGAAGGTGCTGG TGGTACAATAATTGATTCTGGCACCACTCTAACTTATTTTGCTGAGCCTGCTTATGAGATTATCAAGGAAGCATTTATGAAGAAAATTAAGGGCTATCAA CTTGTTGAAGGGTTTCCTCCTCTAAAGCCATGTTATAATGTGTCTGGGATTGAAAAGATTGAGCTTCCTGATTTTGGTATCTTATTTGCTGATGGAGCAT TGTGGGATTTCCCAGTTGAGAATTATTTTATTCAGATTGAGCCTGATGATGTTGTTTGTTTGGCTATTTTGGGGACTCCTAGGTCTGCCCTTTCAATAAT TGGAAACTATCAGCAGCAGAATTTTCACATCCTGTATGATATGAACAAATCCAGACTTGGATATGCACCAATGAAGTGTGCTGATGTGTAACATTTTGTT AGGGTTGAAAGGTGTATAGCAGAACAACACTAAACATGGCTATCTAGGAGGGGTAGGTATTTAGGGTGAGCCTTGGATGGAAAGTGATATACACAGAAAA AGATTGGAATAAAGAAAAGTCCAGGTTATGTGTTTTCAGGTTATTATACAACTAGGCTTCTGGTAATTTTAGAATCAGGGTCATGATTCATGACAGACAA ACATTTCATTGTAATTTGTACACATTTTAACTGCTTCAAATTTTAGTTTTTTTGTCTCTTTTTTTTCCTAATGATCTGTTCTTTCAATTGTATACCATGT TGTCTCAGATAATGATGCTAGTTCTGCTTTTGGTTTACATTTTCTCAATGGAAAATGCTCCATATATATATATACAAGAAACAAAAGAACCTTGGCTTGC CTAAAAA
• Tissue: pods
• Gene name: LI_gene_177393;
• Additional information: details;

Expression of Ll_transcript_344343

FPKM

• PAB: 53.9
• PNAB: 6
• PS1: 25.7
• PS2: 7.5
• PS3: 13.9
• PW1: 10.9
• PW2: 8.8
• PW3: 3.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344343

• Blastp: Aspartyl protease family protein 2 from Arabidopsis with 39.28% of identity
• Blastx: Aspartyl protease family protein 2 from Arabidopsis with 39.28% of identity
• Eggnog: aspartic(ENOG410XNV7)
• Kegg: Link to kegg annotations (AT1G01300)
• CantataDB: Link to cantataDB annotations (CNT0002145)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455958.1)
• Pfam: Eukaryotic aspartyl protease (PF00026.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;