Ll_transcript_344347

• Id Trinity: TRINITY_DN50465_c2_g1_i2
• Name Transcript: Ll_transcript_344347
• Sequence: TGGCTACATAACTGATCTGACTTTCCACCAAAGTTTCTGTTCCTACCGTAATAAATAGTTCATAATCAATTAATAATCCATTTGCATTTTATTATCTCAC ATCACTTCCATCCAAAGGTAGTAATAATAATAATAATAAAATGATATAATTAAGAATATAAGAAAAACCTTATAGCAAGTGCGTTGTTAGATGTTGGTGG CGACTCTTCACTTAACCAAATCGCAGCGGCGGAGGGTGGAATCGCAGTGGCGGCTATTCCTATCTCTTCTTATTTTTAACTAAACAATGGATCTACAATA TAGTTCTTTTATTTGGGCTCTGTTGCTCACCCGGTCCAATATTGTTATTTTTAATTAATATCATTTGCTTTCATAGTCAACTTGGTTCAATTACCAAAGA GTAACAGTGTTTGGGTTCAATCATGGCCCCAAAGGAACAGTTCTGAGTATTTGAGGTTGCTTCTAAGCAGAGACATGACAAGGCAAAAGATGAGGCTTGG TTCTCAGTATGAATCTCTGTATCCTTCAGAAGGAAGCAAGGCATTCTCCTTTGGTAATGTCCTTGATTGATGCTCCCTTGTATATGGGGGCTTCTCTGAT GCAGGATCGGGATCTGAATGAGTATAGACCATCATTGTCCAGCACCAGCAGACATCTACCCTGCAGTCATCAGTTATGTGACCTAAGTTCCGAATGCAAA GGTCCTAAAGACCCATGCCCTTATAAAGATCAGTACGCCTCGGATAATACCTCAAGCTCTGGATTTCTCATTGAAGACAAACTACATTTGGCATCTGATG GCAGAAATGCAGCACAAAGTTCTGTGCAAGCCTCTATTATTTTAGGTTGTGGAAGGAAACAAAGTGGTGGCTATTTAGATGGAGCTGCTCCTGATGGCCT TTTGGGGCTTGGACCTGGGAGTATTTCAGTTCCAAGTTTGCTGGCAAAGGCAGGACTTATTCCAAATTCATTCTCAATCTGTTTAAATGAGAACGACTCC GGGAGAATTCTCTTTGGTGACCAAGGGCATATCGACCAACGATCTACACCGTTCTTGCCTGTAGAAGGGAGATTATCTAGTTATTTTGTTGGAGTGGAAA GCATCTGTGTTAGGAGTGTTTGTCTCAAGCAAACTGGATTTCAAACACTTATCGACAGCGGCACTTCTTTCACCTATCTTCCCAATGAAGTTTATGAGAA AGTTGTAGCGGAGTTTGACAAACACGTAAATGCAACCAGGATTACCGACCAACAAAGCCCATGGGAGTACTGCTATAATGCCAGTTCACAGGAGTTGAAA AATATTCCCCAGATGAAATTCACTTTCTCTAAGAATCAAACATTTTTAATTCAAAATCCACTGTTAACTTTTCCTGGCAGTCAGGACTATACTGCATTTT GTTTGACTGTGATCCAAACGAATGAGGACTATGGTACCATTGGACAGGACTTCCTGAAGGGTTATCGCATGGTGTTTGATCGGGAGAATCTTCGGTTTGG CTGGTCTAGTTCCAATTGTCAAGATAGCATGGGAGATACAGAGAATTTAACATCAGCATCCCATAGTGGATCACCAAATTCTCTACCAGCCAATCAGCAG CAGACTATTCCTAATACTCCCGCCGTACCACCTGCCGTCGCTGGGAAGACTTCCCCGAAACCCTCCATAGTCACCGCATCCAGACATACCTCTTGGCATT TATTAAGTTCATTGTCACTGATCTTTATTTATGGCTATCTGGTTAAGCTTATGTAATCTACTTGTAAATTTCTCACCTATGCAAGCCCTTACTACTGTGG GGTTTTACTTCTCTAGTTTTATAAGCTCTTGTATCTATCGAGGTTAGTGTTAGTCACATTCCTCTCTTCTTTTGGTTTATGGGCCTCTTCTACTTTTCTG TCCTATATATATTATTATCATTATGTAATTATATTATGCTAGTGCAAGTTTTGTTTGATATTTTTCTTCTAAAA
• Tissue: pods
• Gene name: LI_gene_177396;
• Additional information: details;

Expression of Ll_transcript_344347

FPKM

• PAB: 0.3
• PNAB: 0.8
• PS1: 1.4
• PS2: 0.2
• PS3: 0
• PW1: 0.4
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344347

• Blastp: Aspartic proteinase-like protein 1 from Arabidopsis with 52.53% of identity
• Blastx: Aspartic proteinase-like protein 1 from Arabidopsis with 52.53% of identity
• Eggnog: aspartic(ENOG410XNV7)
• Kegg: Link to kegg annotations (AT5G10080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456918.1)
• Pfam: Xylanase inhibitor N-terminal (PF14543.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;