Id Trinity | TRINITY_DN50465_c2_g1_i3 |
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Name Transcript | Ll_transcript_344352 |
Sequence | TGGCTACATAACTGATCTGACTTTCCACCAAAGTTTCTGTTCCTACCGTAATAAATAGTTCATAATCAATTAATAATCCATTTGCATTTTATTATCTCAC ATCACTTCCATCCAAAGGTAGTAATAATAATAATAATAAAATGATATAATTAAGAATATAAGAAAAACCTTATAGCAAGTGCGTTGTTAGATGTTGGTGG CGACTCTTCACTTAACCAAATCGCAGCGGCGGAGGGTGGAATCGCAGTGGCGGCTATTCCTATCTCTTCTTATTTTTAACTAAACAATGGATCTACAATA TAGTTCTTTTATTTGGGCTCTGTTGCTCACCCGGTCCAATATTGTTATTTTTAATTAATATCATTTGCTTTCATAGTCAACTTGGTTCAATTACCAAAGA GTAACAGTGTTTGGGTTCAATCATGGCCCCAAAGGAACAGTTCTGAGTATTTGAGGTTGCTTCTAAGCAGAGACATGACAAGGCAAAAGATGAGGCTTGG TTCTCAGTATGAATCTCTGTATCCTTCAGAAGGAAGCAAGGCATTCTCCTTTGGTAATGTCCTTGATTGGATCGGGATCTGAATGAGTATAGACCATCAT TGTCCAGCACCAGCAGACATCTACCCTGCAGTCATCAGTTATGTGACCTAAGTTCCGAATGCAAAGGTCCTAAAGACCCATGCCCTTATAAAGATCAGTA CGCCTCGGATAATACCTCAAGCTCTGGATTTCTCATTGAAGACAAACTACATTTGGCATCTGATGGCAGAAATGCAGCACAAAGTTCTGTGCAAGCCTCT ATTATTTTAGGTTGTGGAAGGAAACAAAGTGGTGGCTATTTAGATGGAGCTGCTCCTGATGGCCTTTTGGGGCTTGGACCTGGGAGTATTTCAGTTCCAA GTTTGCTGGCAAAGGCAGGACTTATTCCAAATTCATTCTCAATCTGTTTAAATGAGAACGACTCCGGGAGAATTCTCTTTGGTGACCAAGGGCATATCGA CCAACGATCTACACCGTTCTTGCCTGTAGAAGGGAGATTATCTAGTTATTTTGTTGGAGTGGAAAGCATCTGTGTTAGGAGTGTTTGTCTCAAGCAAACT GGATTTCAAACACTTATCGACAGCGGCACTTCTTTCACCTATCTTCCCAATGAAGTTTATGAGAAAGTTGTAGCGGAGTTTGACAAACACGTAAATGCAA CCAGGATTACCGACCAACAAAGCCCATGGGAGTACTGCTATAATGCCAGTTCACAGGAGTTGAAAAATATTCCCCAGATGAAATTCACTTTCTCTAAGAA TCAAACATTTTTAATTCAAAATCCACTGTTAACTTTTCCTGGCAGTCAGGTAAGCCTACTTTTTAACCTTTTTTTCTTCCCGTTGTCATTTGATATGAAT GCAAATGCATTTGATAGGAAATTGTGAATTACTTACTTACAAAAAAATCAATTTTAAACATTGTTCACCAGTGAGGCAACAAAATGAACCATTCGTTTGT ATCTAGTTCACTGACAATTGATTTGTAATATGTGGCCAGGGTTACTGCGGCTTTTCAATTGTGCATGGATAAATTTCTCCTTTAATCTCTTGCTATGTTG TTATGATTCTATAACTTATTTATGATTGTGATGAAATACAAACTTCTGGTGCAGGACTATACTGCATTTTGTTTGACTGTGATCCAAACGAATGAGGACT ATGGTACCATTGGACAGGACTTCCTGAAGGGTTATCGCATGGTGTTTGATCGGGAGAATCTTCGGTTTGGCTGGTCTAGTTCCAATTGTCAAGATAGCAT GGGAGATACAGAGAATTTAACATCAGCATCCCATAGTGGATCACCAAATTCTCTACCAGCCAATCAGCAGCAGACTATTCCTAATACTCCCGCCGTACCA CCTGCCGTCGCTGGGAAGACTTCCCCGAAACCCTCCATAGTCACCGCATCCAGACATACCTCTTGGCATTTATTAAGTTCATTGTCACTGATCTTTATTT ATGGCTATCTGGTTAAGCTTATGTAATCTACTTGTAAATTTCTCACCTATGCAAGCCCTTACTACTGTGGGGTTTTACTTCTCTAGTTTTATAAGCTCTT GTATCTATCGAGGTTAGTGTTAGTCACATTCCTCTCTTCTTTTGGTTTATGGGCCTCTTCTACTTTTCTGTCCTATATATATTATTATCATTATGTAATT ATATTATGCTAGTGCAAGTTTTGTTTGATATTTTTCTTCTAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_177396; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344352
Blastp | Aspartic proteinase-like protein 1 from Arabidopsis with 44.94% of identity |
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Blastx | Aspartic proteinase-like protein 1 from Arabidopsis with 55.89% of identity |
Eggnog | aspartic(ENOG410XNV7) |
Kegg | Link to kegg annotations (AT5G10080) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456917.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |