| Id Trinity | TRINITY_DN50465_c2_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_344358 |
| Sequence | TGGCTACATAACTGATCTGACTTTCCACCAAAGTTTCTGTTCCTACCGTAATAAATAGTTCATAATCAATTAATAATCCATTTGCATTTTATTATCTCAC ATCACTTCCATCCAAAGGTAGTAATAATAATAATAATAAAATGATATAATTAAGAATATAAGAAAAACCTTATAGCAAGTGCGTTGTTAGATGTTGGTGG CGACTCTTCACTTAACCAAATCGCAGCGGCGGAGGGTGGAATCGCAGTGGCGGCTATTCCTATCTCTTCTTATTTTTAACTAAACAATGGATCTACAATA TAGTTCTTTTATTTGGGCTCTGTTGCTCACCCGGTCCAATATTGTTATTTTTAATTAATATCATTTGCTTTCATAGTCAACTTGGTTCAATTACCAAAGA GTAACAGTGTTTGGGTTCAATCATGGCCCCAAAGGAACAGTTCTGAGTATTTGAGGTTGCTTCTAAGCAGAGACATGACAAGGCAAAAGATGAGGCTTGG TTCTCAGTATGAATCTCTGTATCCTTCAGAAGGAAGCAAGGCATTCTCCTTTGGTAATGTCCTTGATTGATGCTCCCTTGTATATGGGGGCTTCTCTGAT GCAGGATCGGGATCTGAATGAGTATAGACCATCATTGTCCAGCACCAGCAGACATCTACCCTGCAGTCATCAGTTATGTGACCTAAGTTCCGAATGCAAA GGTCCTAAAGACCCATGCCCTTATAAAGATCAGTACGCCTCGGATAATACCTCAAGCTCTGGATTTCTCATTGAAGACAAACTACATTTGGCATCTGATG GCAGAAATGCAGCACAAAGTTCTGTGCAAGCCTCTATTATTTTAGGTTGTGGAAGGAAACAAAGTGGTGGCTATTTAGATGGAGCTGCTCCTGATGGCCT TTTGGGGCTTGGACCTGGGAGTATTTCAGTTCCAAGTTTGCTGGCAAAGGCAGGACTTATTCCAAATTCATTCTCAATCTGTTTAAATGAGAACGACTCC GGGAGAATTCTCTTTGGTGACCAAGGGCATATCGACCAACGATCTACACCGTTCTTGCCTGTAGAAGGGAGATTATCTAGTTATTTTGTTGGAGTGGAAA GCATCTGTGTTAGGAGTGTTTGTCTCAAGCAAACTGGATTTCAAACACTTATCGACAGCGGCACTTCTTTCACCTATCTTCCCAATGAAGTTTATGAGAA AGTTGTAGCGGAGGATTACCGACCAACAAAGCCCATGGGAGTACTGCTATAATGCCAGTTCACAGGAGTTGAAAAATATTCCCCAGATGAAATTCACTTT CTCTAAGAATCAAACATTTTTAATTCAAAATCCACTGTTAACTTTTCCTGGCAGTCAGGTAAGCCTACTTTTTAACCTTTTTTTCTTCCCGTTGTCATTT GATATGAATGCAAATGCATTTGATAGGAAATTGTGAATTACTTACTTACAAAAAAATCAATTTTAAACATTGTTCACCAGTGAGGCAACAAAATGAACCA TTCGTTTGTATCTAGTTCACTGACAATTGATTTGTAATATGTGGCCAGGGTTACTGCGGCTTTTCAATTGTGCATGGATAAATTTCTCCTTTAATCTCTT GCTATGTTGTTATGATTCTATAACTTATTTATGATTGTGATGAAATACAAACTTCTGGTGCAGGACTATACTGCATTTTGTTTGACTGTGATCCAAACGA ATGAGGACTATGGTACCATTGGACAGGACTTCCTGAAGGGTTATCGCATGGTGTTTGATCGGGAGAATCTTCGGTTTGGCTGGTCTAGTTCCAATTGTCA AGATAGCATGGGAGATACAGAGAATTTAACATCAGCATCCCATAGTGGATCACCAAATTCTCTACCAGCCAATCAGCAGCAGACTATTCCTAATACTCCC GCCGTACCACCTGCCGTCGCTGGGAAGACTTCCCCGAAACCCTCCATAGTCACCGCATCCAGACATACCTCTTGGCATTTATTAAGTTCATTGTCACTGA TCTTTATTTATGGCTATCTGGTTAAGCTTATGTAATCTACTTGTAAATTTCTCACCTATGCAAGCCCTTACTACTGTGGGGTTTTACTTCTCTAGTTTTA TAAGCTCTTGTATCTATCGAGGTTAGTGTTAGTCACATTCCTCTCTTCTTTTGGTTTATGGGCCTCTTCTACTTTTCTGTCCTATATATATTATTATCAT TATGTAATTATATTATGCTAGTGCAAGTTTTGTTTGATATTTTTCTTCTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_177396; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344358
| Blastp | Aspartic proteinase-like protein 1 from Arabidopsis with 58.77% of identity |
|---|---|
| Blastx | Aspartic proteinase-like protein 1 from Arabidopsis with 58.77% of identity |
| Eggnog | aspartic(ENOG410XNV7) |
| Kegg | Link to kegg annotations (AT5G10080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456917.1) |
| Pfam | Xylanase inhibitor N-terminal (PF14543.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |