Id Trinity | TRINITY_DN50465_c2_g1_i9 |
---|---|
Name Transcript | Ll_transcript_344363 |
Sequence | TGGCTACATAACTGATCTGACTTTCCACCAAAGTTTCTGTTCCTACCGTAATAAATAGTTCATAATCAATTAATAATCCATTTGCATTTTATTATCTCAC ATCACTTCCATCCAAAGGTAGTAATAATAATAATAATAAAATGATATAATTAAGAATATAAGAAAAACCTTATAGCAAGTGCGTTGTTAGATGTTGGTGG CGACTCTTCACTTAACCAAATCGCAGCGGCGGAGGGTGGAATCGCAGTGGCGGCTATTCCTATCTCTTCTTATTTTTAACTAAACAATGGATCTACAATA TAGTTCTTTTATTTGGGCTCTGTTGCTCACCCGGTCCAATATTGTTATTTTTAATTAATATCATTTGCTTTCATAGTCAACTTGGTTCAATTACCAAAGA GTAACAGTGTTTGGGTTCAATCATGGCCCCAAAGGAACAGTTCTGAGTATTTGAGGTTGCTTCTAAGCAGAGACATGACAAGGCAAAAGATGAGGCTTGG TTCTCAGTATGAATCTCTGTATCCTTCAGAAGGAAGCAAGGCATTCTCCTTTGGTAATGTCCTTGATTGGTGAGTGTGTTAGGGTCTGTTTGGCTTATGA AGAAATGCTACAAATCAAGAGGGAATTAAAGTTTGAGTCTTTTGCTGCATACTTTATTTGCTATCTCTTATCAACTTATAGAATGTGCTTCATTTAATTA AGCTTAGTATAGAGTATCAAGCTTCACTTCAATGATTTTAAAAATTCCTCTCTCCCTTTTCATTGGTTGAAATTTCTAGCCTGCGTTGTAAATTAATTTA CACAGTTGTAGTAAGTTTCTTTACTTGGAAAATAAGTAACTAAACTTGGCAATGATTTCCGTGGTTTTTTGTTTGTATACACTGTGAACTTCAGTGATAC ACAAATTGTTAATTTGAGGTGTATTGTTTTAGTTGGAGATTCAGTTAATTTTCTAAACTGATGATTTTTATGTAACTTCTGCATTTGAATGTACTGTAAA CCTATGATTTTTGTTTTGTTTGAAATGCACATAGAATGAAATCATGTAATGCATTATATACATAACATAAAAGTGGTTAATTGCATTTCTGATGATTAAA TGACTAGACTATTAGAAAGAGGATAGAAAGGATGATGAAATAGACACTAAAGAAGTTAGGCAATGGAATAGATGAATCATTCTTTGTGGAATTTCAGGTT GCATTACACATGGATTGATATAGGGACTCCAAATATTTCATTTCTTGTTGCATTGGATACTGGAAGTGATATGCTTTGGGTTCCTTGTGATTATTCGAAT TCCGTCATGTGCTTACTTCCTCGATTTTATTCTTGACCTTCAATGGCATATCCATTTTGTGAATCATTCATATTGTAACCATATAGGATTCTGGTTTTAA GCGGCCCTTGTGTACTAGGTGCAGACAAGGGAGAGAGGGAGAGAGGGTTAAGGTTTAAGAGCATATTAGGTGCTAAAGAATAAGTACATCCTATATATGC CTACCTTTTCCGTTATCAATTGAAACATGCTATGTACTATTTGTTATTTGCATATTTGGTAAATCAAGCTAGAACACTTGAAAAAGGATCTGCGTTTGTG TGAACGTGTATCATGTTGTGCACCACTTAAAATATTCGAACACTTCAAAGTTTGTTATATCACAATGTGTCAGAGACATGTTCCCTGTCAGAGCATCCAC ACTTCTTGGCCATCTGTTGATAGCCTTCCTCCCCTGTAGTTGTACTCTAATTTCTTAGAAGATCGGGATCTGAATGAGTATAGACCATCATTGTCCAGCA CCAGCAGACATCTACCCTGCAGTCATCAGTTATGTGACCTAAGTTCCGAATGCAAAGGTCCTAAAGACCCATGCCCTTATAAAGATCAGTACGCCTCGGA TAATACCTCAAGCTCTGGATTTCTCATTGAAGACAAACTACATTTGGCATCTGATGGCAGAAATGCAGCACAAAGTTCTGTGCAAGCCTCTATTATTTTA GGTTGTGGAAGGAAACAAAGTGGTGGCTATTTAGATGGAGCTGCTCCTGATGGCCTTTTGGGGCTTGGACCTGGGAGTATTTCAGTTCCAAGTTTGCTGG CAAAGGCAGGACTTATTCCAAATTCATTCTCAATCTGTTTAAATGAGAACGACTCCGGGAGAATTCTCTTTGGTGACCAAGGGCATATCGACCAACGATC TACACCGTTCTTGCCTGTAGAAGGGAGATTATCTAGTTATTTTGTTGGAGTGGAAAGCATCTGTGTTAGGAGTGTTTGTCTCAAGCAAACTGGATTTCAA ACACTTATCGACAGCGGCACTTCTTTCACCTATCTTCCCAATGAAGTTTATGAGAAAGTTGTAGCGGAGTTTGACAAACACGTAAATGCAACCAGGATTA CCGACCAACAAAGCCCATGGGAGTACTGCTATAATGCCAGTTCACAGGAGTTGAAAAATATTCCCCAGATGAAATTCACTTTCTCTAAGAATCAAACATT TTTAATTCAAAATCCACTGTTAACTTTTCCTGGCAGTCAGGACTATACTGCATTTTGTTTGACTGTGATCCAAACGAATGAGGACTATGGTACCATTGGA CAGGACTTCCTGAAGGGTTATCGCATGGTGTTTGATCGGGAGAATCTTCGGTTTGGCTGGTCTAGTTCCAATTGTCAAGATAGCATGGGAGATACAGAGA ATTTAACATCAGCATCCCATAGTGGATCACCAAATTCTCTACCAGCCAATCAGCAGCAGACTATTCCTAATACTCCCGCCGTACCACCTGCCGTCGCTGG GAAGACTTCCCCGAAACCCTCCATAGTCACCGCATCCAGACATACCTCTTGGCATTTATTAAGTTCATTGTCACTGATCTTTATTTATGGCTATCTGGTT AAGCTTATGTAATCTACTTGTAAATTTCTCACCTATGCAAGCCCTTACTACTGTGGGGTTTTACTTCTCTAGTTTTATAAGCTCTTGTATCTATCGAGGT TAGTGTTAGTCACATTCCTCTCTTCTTTTGGTTTATGGGCCTCTTCTACTTTTCTGTCCTATATATATTATTATCATTATGTAATTATATTATGCTAGTG CAAGTTTTGTTTGATATTTTTCTTCTAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_177396; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344363
Blastp | Aspartic proteinase-like protein 1 from Arabidopsis with 45.54% of identity |
---|---|
Blastx | Aspartic proteinase-like protein 1 from Arabidopsis with 52.51% of identity |
Eggnog | aspartic(ENOG410XNV7) |
Kegg | Link to kegg annotations (AT5G10080) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456918.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |