Id Trinity | TRINITY_DN50466_c7_g5_i2 |
---|---|
Name Transcript | Ll_transcript_345756 |
Sequence | AAAAAAACAGTTTTTTAATGATGTGTTAAAAAAGACAGAGTGGGAAGTGAAGTAAATAAAAGGTGTAACATGACAATTGGTGCATGAAGACAAAATGAAG ATGAGCCACTCTTGTTCCACCATTCCCTCTCTTTCCATTTGGATAATAATAATAATATTATAACTCCAAATCTTTCCACACAAATTTCCCATCAAAACAA ATATATACAAATAATCACACAAATTTCATACAATACTTTGTTTTTGTGTAGAGCTAAAATCATACATCGCAAAAGGAGAGCTAAGGTGAGTGAGTATCTT TGTTATACAAATATTAAGATGGATTATATCAAAATTCAATTTTGGTTTCAATATTATTTTTAAAATGAGTGATCTTTCTATTATTTTTGTGTGTTAGTTC ATTTAGTAGAGTGAGTGAGAGAATCAAGAAATTGAAGTTTGCATTTGAATAATAAATGGTGACTATTTTGATTACTATAATAAGTGAATATATGTGGTTG ATGTGTGTTAGTCTGTGATTATCCATGATGAGGATATTGCCTCTTTGCTCAGCCACCCCTACCTATTATTCCTCTTCTTCCAACCAGATTCCCGTGTTTG GGGGATTGCACCCTCTGTGCCCTCTTCGGAAGGATCACAATGAGAGTCGATGTACCGCAGAAGGCGCACATTTGAGTTTACAATATGGAGCTCACTCCCA CTCATTGAGAAATTCATTTACAGTACAAGCTACAAATTCATGGGGTTATTCATCAGTGACATCAGAGGTGCATCATTCACTGAGTAATGGAGAACCCAGA TGCATAGAGAGTTATAGTTTATCAGAAGGGTTGGTGGATTTTGCAGAAAAGTCAACTGAAGAATCTAATGCATTAGTAGCACCAACACAACCAGAACCAT TATCAAGTCTTGACATAGTGACAGAGAAGTTGACGCCTGCGCCTGATTCGATTAACCTGAACAATGAATCGTTAGCCAGTACAAAAGCAAGTCTAAGTGA CCTTTTTGCTGGCATAGATGAGTCACTCAGTGCCTCGATTAATAAAGGAGAAAATGCTTTACGAAGCTCACTGGATACAGCCACTTCTTTTGTAGATTCT ATCATAAAGGATGCTAATAAAACTGCTGATGATGTTTTTAGCGGGGCATTTTCTGCTGTTGGTCAAACAGGAGAATTAGCAAATAAGAAGCTTTCTAGCT TTTCAAGTGCACTAAGTGGAACCACAGATAAAGCACCTTCTGTGGCTATTGATGTGTTGCGGCGAACAATCACAGCGGCAGAGGGTTCTTTAACAAGTGG AGCTTCTTATGCTGTCTACCTATACGGCTCAGCCAAGGAGCTTCTTCCTTCGGGTATTAGGGATGCAGTCAATGTATATGAAGATAAAGCGACAGATATC TTGAGGCCTATAGGGTCTGCATCTGAAAAGATATATATAGCTCTATATTCATTGGAGAAGAGTCTTGGCTTGGATCCAAATGACCCAATTATTCCATTTA TTGTTTTTGTGGGCTCTTCAGCAACAATATGGGCTGTTTATTGGTTGTGGACATATGGAGGTTACTCAGGAGATTTATCCCCCAAAGCTGCTTTTGAGCT TTTGGCCGGGAATAAAGATGCCGCACTGATAGACATCCGCACGGAGGATTTGTTAGAAAAAGATGGCATTCCTGATCTTCGACGAGCGGCTCGGTTTCGC TATGCAAGTGTATCTCCACTTGAGGTTGATGGCTCCACAAGCAAGTTGTTGAAGAATGGCAGAGACCTTTATGATTCCTTGACTGCTACTCTTGTTCGTA ATTTGAAGATTGTTAAGGACAGCTCCAAGATTATAGTATTGGATGCTGATGGCACTCGTTCTAAAGGCATCGCAAGATCCTTGAGGAAATTTGGGTTTAA AAATACATACATGGTTCAAGGTGGCTTTCAGTCTTGGGTGAAACAAGGTCTCCGCATCAAGGAACTCAAAACTGAAACAGCATTGTCCATACTCAATGAG GAAGCTGAAGCAATTCTGGAGGAAGTTAGTCCTTCTCCTTTGCAACTTTTAGGTTATGGAACGGCTCTTATTGCGGGGTCATACGCATTATTAGGTGAGT GACATTTTCTTTCATTAACTATCAATTTTTTAGACTTCTAGGAGTTTTTTTCACAGATTTTTGTGTAGCCTACTACTTTTCACATCATGTGTAAGAGGTT ATAGCGTGTCTGTAAATTCATTTTGATTCAGTATGTTAAAGCGAGGTTCCAATAACATTAAACATCATGCTTATGTGTAACTCAATCTATGAGACTTTTT TCATCCATCTTGATCTGACAAAGCACAAAATCGATGTTGTCTCAGAGTGGGAGAAGACATTGCAGTTAATTGGAACATTTGGTCTTGGTTTGGTATGTGT TTTTTTTTCTTTCAGCAAGTGCTTCTTATAAATTGTTTCTTTCAGTGAATTGGTCCAAAAAAGTGCAACACTATGAACTTCAGTTCGATTGCAAAATAGT CATTCACCGTCTAAATCATCGAAGTTGGATGATAAATGTCATGTCCAAAGCATAGTTCAGGGTCTATTTTACACATGTTCTGAAGTTGAGGACTTCATAC AAAGTTCATGGGGTATTTTTAAACGGTGACGGACTATTTTTCACGTGAACAAGAGTCCAGGGTTCTTTTTGCACATTTTTTAAGTTGAGGGATTAAACCA CACAGGTGCACATCATGCTACATTGAGGGGGTGTTTTTGGTCCTCAAAATCAGAAAGTTGGACATCAGTTCTTACATCATTTCCCATATGTTTTACATTC TCTTGGTCAATAACTAGTGTTTTTCCATGTCTTCCTCCAATGTTCCGCTTTATATTTCATCAGACCATCTATCTGCGATTTTCTTCATATGAGGGCTCGG AAGATCTTAAGGAAGATGTGAGGTATGCATATATCATAGTCCATAACTGATTATCTTATAAAGTTGGACTTCATTTTGTGTTTTTTTCTTCTTCTTCAAA GGCTATTGCTTACTCCGGTTAGAGTTGGAGCTCAAGCATTTTCATGGGCTGCTGGAAAAATAGAATCAAATGGGATAGGATTACCAACATCACCTTCATC ATTAGATGTTCAAAACCGGGTATTGCAAGCTGCTGCGAAACATGAATCTCAGCCATCTGATAGTGGAGATAATCAGGACTCAGTTCCTCTCAATCAGAAT GTATGACATTATCATTCACATTAAATGCAGAATAGAGATTGCTATGGTCACAACAAATTAACTGAAAGTTCCAACAAACACTTTAGAGGGTGATTTTTGT ACACCATGCTGCCACTAAGTTTGAATGATTATATTTGATGTTATAATGTCACTGAGTGGATAGCATAATTTGCAATGTCAGAACTCAGAATAATAAGGAT GTGATTAGTAAATAAATAATTATTTGTCAGAACTCAGAACAATTTGTGGTATTGCAGCTTATAGTAATGTAAACTCATCAGTTTATGTTTTAATCTTTTA TGATCCAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_177413; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345756
Blastp | Calcium sensing receptor, chloroplastic from Arabidopsis with 29.88% of identity |
---|---|
Blastx | Calcium sensing receptor, chloroplastic from Arabidopsis with 29.88% of identity |
Eggnog | Calcium sensing receptor(ENOG4111GSH) |
Kegg | Link to kegg annotations (AT5G23060) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438272.1) |
Pfam | Rhodanese-like domain (PF00581.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |